Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC092447.7-201ENST00000422212 1621 ntBASIC3.56□□□□□ -1.84
VPS8Q8N3P4 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.55□□□□□ -1.84
VPS8Q8N3P4 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.55□□□□□ -1.84
VPS8Q8N3P4 MTATP6P11-201ENST00000428071 670 ntBASIC3.55□□□□□ -1.84
VPS8Q8N3P4 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VPS8Q8N3P4 USP9YP7-201ENST00000436723 430 ntBASIC3.55□□□□□ -1.84
VPS8Q8N3P4 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.55□□□□□ -1.84
VPS8Q8N3P4 USP9YP32-201ENST00000452432 430 ntBASIC3.55□□□□□ -1.84
VPS8Q8N3P4 RNU7-157P-201ENST00000459600 66 ntBASIC3.55□□□□□ -1.84
VPS8Q8N3P4 AC021205.1-201ENST00000468797 348 ntBASIC3.55□□□□□ -1.84
VPS8Q8N3P4 RPS29P21-201ENST00000496272 170 ntBASIC3.55□□□□□ -1.84
VPS8Q8N3P4 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.55□□□□□ -1.84
VPS8Q8N3P4 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.55□□□□□ -1.84
VPS8Q8N3P4 AC136601.2-201ENST00000604356 474 ntBASIC3.55□□□□□ -1.84
VPS8Q8N3P4 C2orf27A-204ENST00000623058 969 ntBASIC3.55□□□□□ -1.84
VPS8Q8N3P4 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
VPS8Q8N3P4 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VPS8Q8N3P4 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
VPS8Q8N3P4 OR5H15-201ENST00000383696 930 ntBASIC3.54□□□□□ -1.84
VPS8Q8N3P4 RNU1-138P-201ENST00000384093 164 ntBASIC3.54□□□□□ -1.84
VPS8Q8N3P4 RNU6-1263P-201ENST00000384601 106 ntBASIC3.54□□□□□ -1.84
VPS8Q8N3P4 Z98742.3-201ENST00000418637 326 ntBASIC3.54□□□□□ -1.84
VPS8Q8N3P4 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.54□□□□□ -1.84
VPS8Q8N3P4 MRPL35P4-201ENST00000453682 566 ntBASIC3.54□□□□□ -1.84
VPS8Q8N3P4 AC004263.1-201ENST00000479327 332 ntBASIC3.54□□□□□ -1.84
VPS8Q8N3P4 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.54□□□□□ -1.84
VPS8Q8N3P4 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
VPS8Q8N3P4 AC099778.2-201ENST00000610904 211 ntBASIC3.54□□□□□ -1.84
VPS8Q8N3P4 AC009831.4-201ENST00000620744 325 ntBASIC3.54□□□□□ -1.84
VPS8Q8N3P4 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
VPS8Q8N3P4 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.54□□□□□ -1.84
VPS8Q8N3P4 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.54□□□□□ -1.84
VPS8Q8N3P4 AC008432.1-201ENST00000615912 1320 ntBASIC3.54□□□□□ -1.84
VPS8Q8N3P4 AC009313.2-201ENST00000417893 1941 ntBASIC3.54□□□□□ -1.84
VPS8Q8N3P4 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.54□□□□□ -1.84
VPS8Q8N3P4 RNU6-146P-201ENST00000384602 108 ntBASIC3.53□□□□□ -1.84
VPS8Q8N3P4 AL135786.1-201ENST00000415892 214 ntBASIC3.53□□□□□ -1.84
VPS8Q8N3P4 AC233981.1-201ENST00000423224 461 ntBASIC3.53□□□□□ -1.84
VPS8Q8N3P4 AL031736.2-201ENST00000426573 787 ntBASIC3.53□□□□□ -1.84
VPS8Q8N3P4 AL139415.2-201ENST00000431968 163 ntBASIC3.53□□□□□ -1.84
VPS8Q8N3P4 CFTRP1-201ENST00000456646 183 ntBASIC3.53□□□□□ -1.84
VPS8Q8N3P4 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.53□□□□□ -1.84
VPS8Q8N3P4 RNA5SP309-201ENST00000516670 106 ntBASIC3.53□□□□□ -1.84
VPS8Q8N3P4 RNU6-826P-201ENST00000516827 104 ntBASIC3.53□□□□□ -1.84
VPS8Q8N3P4 AL162233.1-201ENST00000620014 944 ntBASIC3.53□□□□□ -1.84
VPS8Q8N3P4 AC093591.3-201ENST00000634516 308 ntBASIC3.53□□□□□ -1.84
VPS8Q8N3P4 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.53□□□□□ -1.84
VPS8Q8N3P4 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VPS8Q8N3P4 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.53□□□□□ -1.84
VPS8Q8N3P4 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.53□□□□□ -1.84
VPS8Q8N3P4 RNU1-51P-201ENST00000365345 176 ntBASIC3.53□□□□□ -1.85
VPS8Q8N3P4 SAR1AP2-201ENST00000392696 594 ntBASIC3.53□□□□□ -1.85
VPS8Q8N3P4 RNA5SP425-201ENST00000410336 112 ntBASIC3.53□□□□□ -1.85
VPS8Q8N3P4 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
VPS8Q8N3P4 CBX1P4-201ENST00000439415 457 ntBASIC3.53□□□□□ -1.85
VPS8Q8N3P4 AC010095.1-201ENST00000443543 144 ntBASIC3.53□□□□□ -1.85
VPS8Q8N3P4 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.53□□□□□ -1.85
VPS8Q8N3P4 AC087385.1-201ENST00000475062 312 ntBASIC3.53□□□□□ -1.85
VPS8Q8N3P4 OR4R2P-201ENST00000530815 597 ntBASIC3.53□□□□□ -1.85
VPS8Q8N3P4 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.53□□□□□ -1.85
VPS8Q8N3P4 AP002770.2-201ENST00000543613 532 ntBASIC3.53□□□□□ -1.85
VPS8Q8N3P4 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.53□□□□□ -1.85
VPS8Q8N3P4 AC104984.5-201ENST00000586878 94 ntBASIC3.53□□□□□ -1.85
VPS8Q8N3P4 AC104763.2-201ENST00000604179 382 ntBASIC3.53□□□□□ -1.85
VPS8Q8N3P4 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.53□□□□□ -1.85
VPS8Q8N3P4 AL137847.3-201ENST00000611521 109 ntBASIC3.53□□□□□ -1.85
VPS8Q8N3P4 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VPS8Q8N3P4 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.52□□□□□ -1.85
VPS8Q8N3P4 AC107021.2-201ENST00000567714 2095 ntBASIC3.52□□□□□ -1.85
VPS8Q8N3P4 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.52□□□□□ -1.85
VPS8Q8N3P4 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.52□□□□□ -1.85
VPS8Q8N3P4 MIR221-201ENST00000385135 110 ntBASIC3.52□□□□□ -1.85
VPS8Q8N3P4 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.52□□□□□ -1.85
VPS8Q8N3P4 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.52□□□□□ -1.85
VPS8Q8N3P4 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.52□□□□□ -1.85
VPS8Q8N3P4 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.52□□□□□ -1.85
VPS8Q8N3P4 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.52□□□□□ -1.85
VPS8Q8N3P4 TRAV31-201ENST00000502780 342 ntBASIC3.52□□□□□ -1.85
VPS8Q8N3P4 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.52□□□□□ -1.85
VPS8Q8N3P4 AC010198.2-201ENST00000550612 259 ntBASIC3.52□□□□□ -1.85
VPS8Q8N3P4 AC026464.5-201ENST00000562497 722 ntBASIC3.52□□□□□ -1.85
VPS8Q8N3P4 AC012182.1-201ENST00000570133 895 ntBASIC3.52□□□□□ -1.85
VPS8Q8N3P4 AL159169.2-201ENST00000610061 1269 ntBASIC3.52□□□□□ -1.85
VPS8Q8N3P4 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VPS8Q8N3P4 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VPS8Q8N3P4 AC099336.2-201ENST00000422457 254 ntBASIC3.51□□□□□ -1.85
VPS8Q8N3P4 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC3.51□□□□□ -1.85
VPS8Q8N3P4 AC096638.1-201ENST00000444678 216 ntBASIC3.51□□□□□ -1.85
VPS8Q8N3P4 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.51□□□□□ -1.85
VPS8Q8N3P4 RPL9P32-201ENST00000464118 620 ntBASIC3.51□□□□□ -1.85
VPS8Q8N3P4 IGKV3-31-201ENST00000523109 329 ntBASIC3.51□□□□□ -1.85
VPS8Q8N3P4 SNRPGP18-201ENST00000553000 214 ntBASIC3.51□□□□□ -1.85
VPS8Q8N3P4 AC083899.3-201ENST00000603413 594 ntBASIC3.51□□□□□ -1.85
VPS8Q8N3P4 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.51□□□□□ -1.85
VPS8Q8N3P4 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.5□□□□□ -1.85
VPS8Q8N3P4 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VPS8Q8N3P4 RNU6-618P-201ENST00000363518 112 ntBASIC3.5□□□□□ -1.85
VPS8Q8N3P4 AL079342.1-201ENST00000401460 267 ntBASIC3.5□□□□□ -1.85
VPS8Q8N3P4 AL590290.1-201ENST00000405336 380 ntBASIC3.5□□□□□ -1.85
VPS8Q8N3P4 AC007064.1-201ENST00000412238 351 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms