Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AP001180.3-201ENST00000582221 145 ntBASIC3.8□□□□□ -1.8
BEST3Q8N1M1 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.8□□□□□ -1.8
BEST3Q8N1M1 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
BEST3Q8N1M1 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.8□□□□□ -1.8
BEST3Q8N1M1 AC092354.1-201ENST00000606057 376 ntBASIC3.8□□□□□ -1.8
BEST3Q8N1M1 AC135507.1-201ENST00000607214 561 ntBASIC3.8□□□□□ -1.8
BEST3Q8N1M1 AC073114.1-201ENST00000612027 490 ntBASIC3.8□□□□□ -1.8
BEST3Q8N1M1 AC004009.2-201ENST00000623016 728 ntBASIC3.8□□□□□ -1.8
BEST3Q8N1M1 AL356266.1-201ENST00000623311 483 ntBASIC3.8□□□□□ -1.8
BEST3Q8N1M1 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
BEST3Q8N1M1 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
BEST3Q8N1M1 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
BEST3Q8N1M1 NUP58P1-201ENST00000502546 1738 ntBASIC3.8□□□□□ -1.8
BEST3Q8N1M1 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.8□□□□□ -1.8
BEST3Q8N1M1 AC097714.1-201ENST00000511272 1647 ntBASIC3.8□□□□□ -1.8
BEST3Q8N1M1 MTCO1P24-201ENST00000515438 1558 ntBASIC3.8□□□□□ -1.8
BEST3Q8N1M1 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
BEST3Q8N1M1 AL031985.3-201ENST00000565390 2449 ntBASIC3.8□□□□□ -1.8
BEST3Q8N1M1 CR383658.2-201ENST00000547576 1525 ntBASIC3.8□□□□□ -1.8
BEST3Q8N1M1 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.8□□□□□ -1.8
BEST3Q8N1M1 AL022578.1-201ENST00000439330 1433 ntBASIC3.79□□□□□ -1.8
BEST3Q8N1M1 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.79□□□□□ -1.8
BEST3Q8N1M1 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
BEST3Q8N1M1 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.79□□□□□ -1.8
BEST3Q8N1M1 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
BEST3Q8N1M1 LINC02471-203ENST00000641941 4752 ntBASIC3.79□□□□□ -1.8
BEST3Q8N1M1 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.79□□□□□ -1.8
BEST3Q8N1M1 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
BEST3Q8N1M1 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
BEST3Q8N1M1 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
BEST3Q8N1M1 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
BEST3Q8N1M1 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
BEST3Q8N1M1 MT-TC-201ENST00000387405 66 ntBASIC3.79□□□□□ -1.8
BEST3Q8N1M1 SNORA26.8-201ENST00000391306 124 ntBASIC3.79□□□□□ -1.8
BEST3Q8N1M1 RPL32P23-201ENST00000397237 405 ntBASIC3.79□□□□□ -1.8
BEST3Q8N1M1 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
BEST3Q8N1M1 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
BEST3Q8N1M1 MIR320C1-201ENST00000408566 88 ntBASIC3.79□□□□□ -1.8
BEST3Q8N1M1 HMGB1P11-201ENST00000413899 637 ntBASIC3.79□□□□□ -1.8
BEST3Q8N1M1 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.79□□□□□ -1.8
BEST3Q8N1M1 NPM1P11-201ENST00000417106 855 ntBASIC3.79□□□□□ -1.8
BEST3Q8N1M1 BX119904.4-201ENST00000424402 301 ntBASIC3.79□□□□□ -1.8
BEST3Q8N1M1 OR8F1P-201ENST00000425243 930 ntBASIC3.79□□□□□ -1.8
BEST3Q8N1M1 AL512649.1-201ENST00000428997 581 ntBASIC3.79□□□□□ -1.8
BEST3Q8N1M1 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.79□□□□□ -1.8
BEST3Q8N1M1 MUPP-201ENST00000438111 566 ntBASIC3.79□□□□□ -1.8
BEST3Q8N1M1 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.79□□□□□ -1.8
BEST3Q8N1M1 AL512286.1-201ENST00000439244 400 ntBASIC3.79□□□□□ -1.8
BEST3Q8N1M1 RPS4XP4-201ENST00000443195 763 ntBASIC3.79□□□□□ -1.8
BEST3Q8N1M1 MTCO1P27-201ENST00000448269 226 ntBASIC3.79□□□□□ -1.8
BEST3Q8N1M1 RPL36AP33-201ENST00000450395 310 ntBASIC3.79□□□□□ -1.8
BEST3Q8N1M1 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.79□□□□□ -1.8
BEST3Q8N1M1 KATNBL1P6-201ENST00000453433 915 ntBASIC3.79□□□□□ -1.8
BEST3Q8N1M1 SUMO2P2-201ENST00000456482 255 ntBASIC3.79□□□□□ -1.8
BEST3Q8N1M1 AC079804.1-201ENST00000461922 436 ntBASIC3.79□□□□□ -1.8
BEST3Q8N1M1 RPL30P9-201ENST00000465586 330 ntBASIC3.79□□□□□ -1.8
BEST3Q8N1M1 RPS26P15-201ENST00000488067 348 ntBASIC3.79□□□□□ -1.8
BEST3Q8N1M1 RPS4XP15-201ENST00000489210 795 ntBASIC3.79□□□□□ -1.8
BEST3Q8N1M1 AC006499.5-201ENST00000505037 514 ntBASIC3.79□□□□□ -1.8
BEST3Q8N1M1 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.79□□□□□ -1.8
BEST3Q8N1M1 AC010460.1-201ENST00000507087 466 ntBASIC3.79□□□□□ -1.8
BEST3Q8N1M1 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.79□□□□□ -1.8
BEST3Q8N1M1 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.79□□□□□ -1.8
BEST3Q8N1M1 MTCO3P44-201ENST00000510977 541 ntBASIC3.79□□□□□ -1.8
BEST3Q8N1M1 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.79□□□□□ -1.8
BEST3Q8N1M1 MTND5P13-201ENST00000513046 1079 ntBASIC3.79□□□□□ -1.8
BEST3Q8N1M1 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.79□□□□□ -1.8
BEST3Q8N1M1 IGKV2D-36-201ENST00000518643 226 ntBASIC3.79□□□□□ -1.8
BEST3Q8N1M1 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.79□□□□□ -1.8
BEST3Q8N1M1 HIGD1AP10-201ENST00000527837 282 ntBASIC3.79□□□□□ -1.8
BEST3Q8N1M1 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.79□□□□□ -1.8
BEST3Q8N1M1 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.79□□□□□ -1.8
BEST3Q8N1M1 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.79□□□□□ -1.8
BEST3Q8N1M1 AC141257.3-201ENST00000572906 215 ntBASIC3.79□□□□□ -1.8
BEST3Q8N1M1 AC053481.3-201ENST00000577881 843 ntBASIC3.79□□□□□ -1.8
BEST3Q8N1M1 AC053481.4-201ENST00000583164 216 ntBASIC3.79□□□□□ -1.8
BEST3Q8N1M1 LLPHP1-201ENST00000603571 367 ntBASIC3.79□□□□□ -1.8
BEST3Q8N1M1 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.79□□□□□ -1.8
BEST3Q8N1M1 AC245008.1-201ENST00000608123 476 ntBASIC3.79□□□□□ -1.8
BEST3Q8N1M1 AC107214.2-201ENST00000608204 634 ntBASIC3.79□□□□□ -1.8
BEST3Q8N1M1 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.79□□□□□ -1.8
BEST3Q8N1M1 BMS1P21-201ENST00000634565 365 ntBASIC3.79□□□□□ -1.8
BEST3Q8N1M1 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.79□□□□□ -1.8
BEST3Q8N1M1 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
BEST3Q8N1M1 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
BEST3Q8N1M1 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
BEST3Q8N1M1 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.79□□□□□ -1.8
BEST3Q8N1M1 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.79□□□□□ -1.8
BEST3Q8N1M1 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
BEST3Q8N1M1 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
BEST3Q8N1M1 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.79□□□□□ -1.8
BEST3Q8N1M1 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
BEST3Q8N1M1 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
BEST3Q8N1M1 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
BEST3Q8N1M1 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
BEST3Q8N1M1 AL672167.1-206ENST00000356293 943 ntBASIC3.78□□□□□ -1.8
BEST3Q8N1M1 RNU6-501P-201ENST00000364072 100 ntBASIC3.78□□□□□ -1.8
BEST3Q8N1M1 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.78□□□□□ -1.8
BEST3Q8N1M1 RNU6-356P-201ENST00000384140 107 ntBASIC3.78□□□□□ -1.8
BEST3Q8N1M1 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 140 ms