Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 PABPC1P6-201ENST00000445594 1829 ntBASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 AC025470.1-201ENST00000510053 2032 ntBASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NPAS3Q8IXF0 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
NPAS3Q8IXF0 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
NPAS3Q8IXF0 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
NPAS3Q8IXF0 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6□□□□□ -1.45
NPAS3Q8IXF0 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NPAS3Q8IXF0 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NPAS3Q8IXF0 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6□□□□□ -1.45
NPAS3Q8IXF0 AC002525.1-201ENST00000624392 1622 ntBASIC6□□□□□ -1.45
NPAS3Q8IXF0 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NPAS3Q8IXF0 AL161912.4-201ENST00000623889 2468 ntBASIC6□□□□□ -1.45
NPAS3Q8IXF0 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
NPAS3Q8IXF0 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NPAS3Q8IXF0 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6□□□□□ -1.45
NPAS3Q8IXF0 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
NPAS3Q8IXF0 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC6□□□□□ -1.45
NPAS3Q8IXF0 RNU6-1287P-201ENST00000362914 107 ntBASIC6□□□□□ -1.45
NPAS3Q8IXF0 RNA5-8SP7-201ENST00000363443 155 ntBASIC6□□□□□ -1.45
NPAS3Q8IXF0 RNA5SP234-201ENST00000363916 119 ntBASIC6□□□□□ -1.45
NPAS3Q8IXF0 RNA5SP131-201ENST00000365452 119 ntBASIC6□□□□□ -1.45
NPAS3Q8IXF0 SNORA70-201ENST00000384436 135 ntBASIC6□□□□□ -1.45
NPAS3Q8IXF0 RNU6-1060P-201ENST00000384664 107 ntBASIC6□□□□□ -1.45
NPAS3Q8IXF0 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6□□□□□ -1.45
NPAS3Q8IXF0 TIMM9P1-201ENST00000436122 256 ntBASIC6□□□□□ -1.45
NPAS3Q8IXF0 GAPDHP58-201ENST00000438477 1006 ntBASIC6□□□□□ -1.45
NPAS3Q8IXF0 AL935212.3-201ENST00000450729 284 ntBASIC6□□□□□ -1.45
NPAS3Q8IXF0 SCARNA18-201ENST00000459004 134 ntBASIC6□□□□□ -1.45
NPAS3Q8IXF0 AC026410.2-201ENST00000460281 156 ntBASIC6□□□□□ -1.45
NPAS3Q8IXF0 AC091179.1-201ENST00000461606 579 ntBASIC6□□□□□ -1.45
NPAS3Q8IXF0 RPL9P9-202ENST00000466501 579 ntBASIC6□□□□□ -1.45
NPAS3Q8IXF0 OR2AO1P-201ENST00000476497 403 ntBASIC6□□□□□ -1.45
NPAS3Q8IXF0 PDCD5P2-201ENST00000507570 312 ntBASIC6□□□□□ -1.45
NPAS3Q8IXF0 EIF3KP3-201ENST00000514461 639 ntBASIC6□□□□□ -1.45
NPAS3Q8IXF0 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6□□□□□ -1.45
NPAS3Q8IXF0 SCARNA24.2-201ENST00000516968 130 ntBASIC6□□□□□ -1.45
NPAS3Q8IXF0 RNA5SP170-201ENST00000517150 101 ntBASIC6□□□□□ -1.45
NPAS3Q8IXF0 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
NPAS3Q8IXF0 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC6□□□□□ -1.45
NPAS3Q8IXF0 MRPS36P4-201ENST00000534436 298 ntBASIC6□□□□□ -1.45
NPAS3Q8IXF0 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6□□□□□ -1.45
NPAS3Q8IXF0 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC6□□□□□ -1.45
NPAS3Q8IXF0 HSPE1P3-201ENST00000559254 309 ntBASIC6□□□□□ -1.45
NPAS3Q8IXF0 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6□□□□□ -1.45
NPAS3Q8IXF0 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6□□□□□ -1.45
NPAS3Q8IXF0 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC6□□□□□ -1.45
NPAS3Q8IXF0 RPS29P30-201ENST00000600975 111 ntBASIC6□□□□□ -1.45
NPAS3Q8IXF0 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
NPAS3Q8IXF0 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
NPAS3Q8IXF0 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NPAS3Q8IXF0 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NPAS3Q8IXF0 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
NPAS3Q8IXF0 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6□□□□□ -1.45
NPAS3Q8IXF0 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6□□□□□ -1.45
NPAS3Q8IXF0 AC009831.5-201ENST00000624000 3189 ntBASIC6□□□□□ -1.45
NPAS3Q8IXF0 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 BX322639.1-202ENST00000423987 2213 ntBASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 AC005225.5-201ENST00000623547 2225 ntBASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 RNU6-179P-201ENST00000363350 107 ntBASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 SNORA23-201ENST00000365128 182 ntBASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 Y_RNA.383-201ENST00000383855 97 ntBASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 AC009804.1-201ENST00000400949 179 ntBASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 AL356421.1-201ENST00000403255 413 ntBASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 AC233981.1-201ENST00000423224 461 ntBASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 AL133173.1-201ENST00000423458 397 ntBASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 AC087650.1-201ENST00000431445 468 ntBASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 AL162739.1-201ENST00000450606 307 ntBASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 AC079804.1-201ENST00000461922 436 ntBASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 FTH1P2-201ENST00000466086 412 ntBASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 RN7SL583P-201ENST00000475692 287 ntBASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 AC093270.2-201ENST00000486157 792 ntBASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 PGAM1P13-201ENST00000507497 754 ntBASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 RNU6-844P-201ENST00000517175 102 ntBASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 LARP7P2-201ENST00000575306 125 ntBASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 AP003789.1-201ENST00000617737 605 ntBASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 AC118658.2-201ENST00000618697 459 ntBASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms