Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 AC007823.1-201ENST00000569932 1566 ntBASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 Y_RNA.169-201ENST00000363745 96 ntBASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 ATP5F1P3-201ENST00000397213 657 ntBASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 AL138878.1-201ENST00000405131 347 ntBASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 AL356131.1-201ENST00000405826 414 ntBASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 Z98941.1-201ENST00000407764 100 ntBASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 MTND2P18-201ENST00000419962 1030 ntBASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 PTP4A1P5-201ENST00000420305 455 ntBASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 RPL7P2-201ENST00000427639 268 ntBASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 MRPS18BP2-201ENST00000434310 759 ntBASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 YWHAZP7-201ENST00000436906 631 ntBASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 SLC31A1P1-201ENST00000451221 567 ntBASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 MRPS31P2-201ENST00000451581 518 ntBASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 AC012170.1-201ENST00000495139 359 ntBASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 OR5H5P-201ENST00000503164 928 ntBASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 AC008127.2-201ENST00000549925 1075 ntBASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 VN1R82P-201ENST00000601481 356 ntBASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 AL133507.1-201ENST00000605269 557 ntBASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 AC069209.1-201ENST00000619282 651 ntBASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 AL357559.1-201ENST00000622228 274 ntBASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 AC078883.4-201ENST00000623218 367 ntBASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 AP000676.3-201ENST00000623299 569 ntBASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.41□□□□□ -1.7
CHD1LQ86WJ1 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CHD1LQ86WJ1 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
CHD1LQ86WJ1 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.4□□□□□ -1.7
CHD1LQ86WJ1 SGO1P2-201ENST00000429458 1589 ntBASIC4.4□□□□□ -1.7
CHD1LQ86WJ1 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
CHD1LQ86WJ1 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CHD1LQ86WJ1 RNU6-657P-201ENST00000383904 107 ntBASIC4.4□□□□□ -1.71
CHD1LQ86WJ1 RNU6-730P-201ENST00000383954 104 ntBASIC4.4□□□□□ -1.71
CHD1LQ86WJ1 AL450338.1-201ENST00000407987 512 ntBASIC4.4□□□□□ -1.71
CHD1LQ86WJ1 RN7SKP53-201ENST00000411337 315 ntBASIC4.4□□□□□ -1.71
CHD1LQ86WJ1 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.4□□□□□ -1.71
CHD1LQ86WJ1 AMD1P2-201ENST00000412936 992 ntBASIC4.4□□□□□ -1.71
CHD1LQ86WJ1 DBIP2-201ENST00000419076 262 ntBASIC4.4□□□□□ -1.71
CHD1LQ86WJ1 MTCYBP24-201ENST00000420387 1106 ntBASIC4.4□□□□□ -1.71
CHD1LQ86WJ1 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CHD1LQ86WJ1 AL158071.1-201ENST00000430315 461 ntBASIC4.4□□□□□ -1.71
CHD1LQ86WJ1 AL133217.1-201ENST00000450980 425 ntBASIC4.4□□□□□ -1.71
CHD1LQ86WJ1 RPL12P26-201ENST00000452430 487 ntBASIC4.4□□□□□ -1.71
CHD1LQ86WJ1 AC007967.1-201ENST00000455422 1159 ntBASIC4.4□□□□□ -1.71
CHD1LQ86WJ1 PRELID3BP7-201ENST00000503606 469 ntBASIC4.4□□□□□ -1.71
CHD1LQ86WJ1 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.4□□□□□ -1.71
CHD1LQ86WJ1 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.4□□□□□ -1.71
CHD1LQ86WJ1 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.4□□□□□ -1.71
CHD1LQ86WJ1 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CHD1LQ86WJ1 RNU2-27P-201ENST00000516185 142 ntBASIC4.4□□□□□ -1.71
CHD1LQ86WJ1 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.4□□□□□ -1.71
CHD1LQ86WJ1 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.4□□□□□ -1.71
CHD1LQ86WJ1 SLC2A13P1-201ENST00000531560 322 ntBASIC4.4□□□□□ -1.71
CHD1LQ86WJ1 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.4□□□□□ -1.71
CHD1LQ86WJ1 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.4□□□□□ -1.71
CHD1LQ86WJ1 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.4□□□□□ -1.71
CHD1LQ86WJ1 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.4□□□□□ -1.71
CHD1LQ86WJ1 AC002400.1-201ENST00000569310 726 ntBASIC4.4□□□□□ -1.71
CHD1LQ86WJ1 AL355812.1-201ENST00000603215 216 ntBASIC4.4□□□□□ -1.71
CHD1LQ86WJ1 AC013444.2-201ENST00000603317 787 ntBASIC4.4□□□□□ -1.71
CHD1LQ86WJ1 AC083899.3-201ENST00000603413 594 ntBASIC4.4□□□□□ -1.71
CHD1LQ86WJ1 AL451086.1-201ENST00000605596 223 ntBASIC4.4□□□□□ -1.71
CHD1LQ86WJ1 AL159169.3-201ENST00000608871 561 ntBASIC4.4□□□□□ -1.71
CHD1LQ86WJ1 RNVU1-4-201ENST00000612985 164 ntBASIC4.4□□□□□ -1.71
CHD1LQ86WJ1 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.4□□□□□ -1.71
CHD1LQ86WJ1 AC103706.2-201ENST00000638080 240 ntBASIC4.4□□□□□ -1.71
CHD1LQ86WJ1 ZNF542P-204ENST00000482727 1305 ntBASIC4.4□□□□□ -1.71
CHD1LQ86WJ1 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CHD1LQ86WJ1 AC012321.1-201ENST00000561622 1588 ntBASIC4.4□□□□□ -1.71
CHD1LQ86WJ1 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHD1LQ86WJ1 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHD1LQ86WJ1 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
CHD1LQ86WJ1 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHD1LQ86WJ1 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.39□□□□□ -1.71
CHD1LQ86WJ1 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHD1LQ86WJ1 SNORD9-201ENST00000362566 104 ntBASIC4.39□□□□□ -1.71
CHD1LQ86WJ1 Y_RNA.311-201ENST00000365068 96 ntBASIC4.39□□□□□ -1.71
CHD1LQ86WJ1 TAF9BP1-201ENST00000396646 746 ntBASIC4.39□□□□□ -1.71
CHD1LQ86WJ1 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHD1LQ86WJ1 RNU4-72P-201ENST00000410754 173 ntBASIC4.39□□□□□ -1.71
CHD1LQ86WJ1 AC068533.1-201ENST00000418542 415 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms