Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.96□□□□□ -1.78
PRPF39Q86UA1 AC006504.1-201ENST00000562493 3666 ntBASIC3.96□□□□□ -1.78
PRPF39Q86UA1 AL079343.1-201ENST00000572358 1771 ntBASIC3.96□□□□□ -1.78
PRPF39Q86UA1 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PRPF39Q86UA1 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PRPF39Q86UA1 AL356473.1-201ENST00000406203 1408 ntBASIC3.95□□□□□ -1.78
PRPF39Q86UA1 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PRPF39Q86UA1 MAPK10-373ENST00000641983 6772 ntBASIC3.95□□□□□ -1.78
PRPF39Q86UA1 AL133383.2-201ENST00000622958 2336 ntBASIC3.95□□□□□ -1.78
PRPF39Q86UA1 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
PRPF39Q86UA1 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PRPF39Q86UA1 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PRPF39Q86UA1 RNA5SP171-201ENST00000391071 115 ntBASIC3.95□□□□□ -1.78
PRPF39Q86UA1 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.95□□□□□ -1.78
PRPF39Q86UA1 AMD1P2-201ENST00000412936 992 ntBASIC3.95□□□□□ -1.78
PRPF39Q86UA1 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PRPF39Q86UA1 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PRPF39Q86UA1 Z97055.1-201ENST00000419730 712 ntBASIC3.95□□□□□ -1.78
PRPF39Q86UA1 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PRPF39Q86UA1 AC084290.1-201ENST00000434995 374 ntBASIC3.95□□□□□ -1.78
PRPF39Q86UA1 MUPP-201ENST00000438111 566 ntBASIC3.95□□□□□ -1.78
PRPF39Q86UA1 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.95□□□□□ -1.78
PRPF39Q86UA1 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.95□□□□□ -1.78
PRPF39Q86UA1 AL445669.2-201ENST00000454425 421 ntBASIC3.95□□□□□ -1.78
PRPF39Q86UA1 AC023424.2-201ENST00000493479 777 ntBASIC3.95□□□□□ -1.78
PRPF39Q86UA1 COX7A2P2-201ENST00000505291 250 ntBASIC3.95□□□□□ -1.78
PRPF39Q86UA1 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.95□□□□□ -1.78
PRPF39Q86UA1 RNU6-311P-201ENST00000516224 102 ntBASIC3.95□□□□□ -1.78
PRPF39Q86UA1 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.95□□□□□ -1.78
PRPF39Q86UA1 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.95□□□□□ -1.78
PRPF39Q86UA1 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.95□□□□□ -1.78
PRPF39Q86UA1 AC090877.1-201ENST00000561418 344 ntBASIC3.95□□□□□ -1.78
PRPF39Q86UA1 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.95□□□□□ -1.78
PRPF39Q86UA1 MIR4444-1-201ENST00000581696 74 ntBASIC3.95□□□□□ -1.78
PRPF39Q86UA1 MIR4444-2-201ENST00000584390 74 ntBASIC3.95□□□□□ -1.78
PRPF39Q86UA1 AC008739.3-201ENST00000603262 127 ntBASIC3.95□□□□□ -1.78
PRPF39Q86UA1 AC006270.3-201ENST00000605967 1036 ntBASIC3.95□□□□□ -1.78
PRPF39Q86UA1 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.95□□□□□ -1.78
PRPF39Q86UA1 AC025588.4-201ENST00000615802 908 ntBASIC3.95□□□□□ -1.78
PRPF39Q86UA1 MIR6075-201ENST00000620782 95 ntBASIC3.95□□□□□ -1.78
PRPF39Q86UA1 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PRPF39Q86UA1 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.95□□□□□ -1.78
PRPF39Q86UA1 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.95□□□□□ -1.78
PRPF39Q86UA1 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PRPF39Q86UA1 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PRPF39Q86UA1 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PRPF39Q86UA1 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PRPF39Q86UA1 AC005539.1-201ENST00000443768 1479 ntBASIC3.94□□□□□ -1.78
PRPF39Q86UA1 ANAPC10P1-201ENST00000395991 556 ntBASIC3.94□□□□□ -1.78
PRPF39Q86UA1 ATP5F1P4-201ENST00000397288 746 ntBASIC3.94□□□□□ -1.78
PRPF39Q86UA1 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PRPF39Q86UA1 AL031679.1-201ENST00000400616 525 ntBASIC3.94□□□□□ -1.78
PRPF39Q86UA1 SSR1P2-201ENST00000415208 787 ntBASIC3.94□□□□□ -1.78
PRPF39Q86UA1 AC245052.5-201ENST00000416320 649 ntBASIC3.94□□□□□ -1.78
PRPF39Q86UA1 AL139421.1-201ENST00000423010 169 ntBASIC3.94□□□□□ -1.78
PRPF39Q86UA1 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.94□□□□□ -1.78
PRPF39Q86UA1 AL451062.2-201ENST00000427515 271 ntBASIC3.94□□□□□ -1.78
PRPF39Q86UA1 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.94□□□□□ -1.78
PRPF39Q86UA1 AL590233.1-201ENST00000430017 456 ntBASIC3.94□□□□□ -1.78
PRPF39Q86UA1 GOT2P5-201ENST00000433995 546 ntBASIC3.94□□□□□ -1.78
PRPF39Q86UA1 Z74696.2-201ENST00000436514 498 ntBASIC3.94□□□□□ -1.78
PRPF39Q86UA1 CYCSP43-201ENST00000438233 310 ntBASIC3.94□□□□□ -1.78
PRPF39Q86UA1 NOTCH2P1-201ENST00000443481 624 ntBASIC3.94□□□□□ -1.78
PRPF39Q86UA1 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.94□□□□□ -1.78
PRPF39Q86UA1 RPL26P28-201ENST00000451325 435 ntBASIC3.94□□□□□ -1.78
PRPF39Q86UA1 HMGN2P7-201ENST00000456186 273 ntBASIC3.94□□□□□ -1.78
PRPF39Q86UA1 USP9YP25-201ENST00000457708 443 ntBASIC3.94□□□□□ -1.78
PRPF39Q86UA1 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.94□□□□□ -1.78
PRPF39Q86UA1 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
PRPF39Q86UA1 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PRPF39Q86UA1 AC004069.2-201ENST00000505438 1114 ntBASIC3.94□□□□□ -1.78
PRPF39Q86UA1 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.94□□□□□ -1.78
PRPF39Q86UA1 AC008802.1-201ENST00000519121 791 ntBASIC3.94□□□□□ -1.78
PRPF39Q86UA1 HSPA8P13-201ENST00000523715 472 ntBASIC3.94□□□□□ -1.78
PRPF39Q86UA1 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.94□□□□□ -1.78
PRPF39Q86UA1 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.94□□□□□ -1.78
PRPF39Q86UA1 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.94□□□□□ -1.78
PRPF39Q86UA1 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.94□□□□□ -1.78
PRPF39Q86UA1 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.94□□□□□ -1.78
PRPF39Q86UA1 AL450336.1-201ENST00000605180 586 ntBASIC3.94□□□□□ -1.78
PRPF39Q86UA1 BRDTP1-201ENST00000605735 677 ntBASIC3.94□□□□□ -1.78
PRPF39Q86UA1 AC005344.1-201ENST00000613391 459 ntBASIC3.94□□□□□ -1.78
PRPF39Q86UA1 AL050303.3-201ENST00000613704 284 ntBASIC3.94□□□□□ -1.78
PRPF39Q86UA1 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.94□□□□□ -1.78
PRPF39Q86UA1 AC039056.2-201ENST00000622261 511 ntBASIC3.94□□□□□ -1.78
PRPF39Q86UA1 FP236240.3-201ENST00000623061 327 ntBASIC3.94□□□□□ -1.78
PRPF39Q86UA1 AP001002.2-201ENST00000625137 386 ntBASIC3.94□□□□□ -1.78
PRPF39Q86UA1 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.94□□□□□ -1.78
PRPF39Q86UA1 CRYM-AS1-204ENST00000637983 556 ntBASIC3.94□□□□□ -1.78
PRPF39Q86UA1 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.94□□□□□ -1.78
PRPF39Q86UA1 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PRPF39Q86UA1 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.94□□□□□ -1.78
PRPF39Q86UA1 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.94□□□□□ -1.78
PRPF39Q86UA1 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
PRPF39Q86UA1 AP004289.2-201ENST00000444413 1457 ntBASIC3.93□□□□□ -1.78
PRPF39Q86UA1 AC024560.2-201ENST00000507981 1497 ntBASIC3.93□□□□□ -1.78
PRPF39Q86UA1 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.93□□□□□ -1.78
PRPF39Q86UA1 AC097714.1-201ENST00000511272 1647 ntBASIC3.93□□□□□ -1.78
PRPF39Q86UA1 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PRPF39Q86UA1 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms