Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 RPS15AP17-201ENST00000470598 390 ntBASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 BZW1P2-201ENST00000473537 826 ntBASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 BTF3L4P4-201ENST00000506381 449 ntBASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 RNA5SP309-201ENST00000516670 106 ntBASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 RNA5SP143-201ENST00000516936 115 ntBASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 OR4A45P-201ENST00000529954 901 ntBASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 AC009101.1-201ENST00000568135 242 ntBASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 MIR4458-201ENST00000578872 75 ntBASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 MIR4637-201ENST00000582405 84 ntBASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 AC110760.3-201ENST00000598794 467 ntBASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 AL137849.1-201ENST00000604767 169 ntBASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 AC005344.1-201ENST00000613391 459 ntBASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 AL354976.1-201ENST00000613843 387 ntBASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
SYNE3Q6ZMZ3 FAM35DP-201ENST00000323387 2712 ntBASIC4.45□□□□□ -1.7
SYNE3Q6ZMZ3 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SYNE3Q6ZMZ3 AP004289.2-201ENST00000444413 1457 ntBASIC4.45□□□□□ -1.7
SYNE3Q6ZMZ3 U1.1-201ENST00000384101 164 ntBASIC4.45□□□□□ -1.7
SYNE3Q6ZMZ3 CYCSP45-201ENST00000402289 315 ntBASIC4.45□□□□□ -1.7
SYNE3Q6ZMZ3 SSXP10-201ENST00000402595 565 ntBASIC4.45□□□□□ -1.7
SYNE3Q6ZMZ3 BTBD10P2-201ENST00000404779 676 ntBASIC4.45□□□□□ -1.7
SYNE3Q6ZMZ3 MIR1193-201ENST00000408109 78 ntBASIC4.45□□□□□ -1.7
SYNE3Q6ZMZ3 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SYNE3Q6ZMZ3 RPS15AP40-201ENST00000419621 391 ntBASIC4.45□□□□□ -1.7
SYNE3Q6ZMZ3 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.45□□□□□ -1.7
SYNE3Q6ZMZ3 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.45□□□□□ -1.7
SYNE3Q6ZMZ3 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.45□□□□□ -1.7
SYNE3Q6ZMZ3 AC092427.1-201ENST00000439177 601 ntBASIC4.45□□□□□ -1.7
SYNE3Q6ZMZ3 RPS29P7-201ENST00000439662 171 ntBASIC4.45□□□□□ -1.7
SYNE3Q6ZMZ3 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.45□□□□□ -1.7
SYNE3Q6ZMZ3 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.45□□□□□ -1.7
SYNE3Q6ZMZ3 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.45□□□□□ -1.7
SYNE3Q6ZMZ3 AC084198.1-201ENST00000477747 402 ntBASIC4.45□□□□□ -1.7
SYNE3Q6ZMZ3 TRBV12-2-201ENST00000489763 344 ntBASIC4.45□□□□□ -1.7
SYNE3Q6ZMZ3 RPL5P23-201ENST00000496040 868 ntBASIC4.45□□□□□ -1.7
SYNE3Q6ZMZ3 MTCYBP17-201ENST00000503579 789 ntBASIC4.45□□□□□ -1.7
SYNE3Q6ZMZ3 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.45□□□□□ -1.7
SYNE3Q6ZMZ3 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.45□□□□□ -1.7
SYNE3Q6ZMZ3 SNORA70.14-201ENST00000516205 110 ntBASIC4.45□□□□□ -1.7
SYNE3Q6ZMZ3 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.45□□□□□ -1.7
SYNE3Q6ZMZ3 NARSP2-201ENST00000518524 679 ntBASIC4.45□□□□□ -1.7
SYNE3Q6ZMZ3 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.45□□□□□ -1.7
SYNE3Q6ZMZ3 MIR5685-201ENST00000579080 79 ntBASIC4.45□□□□□ -1.7
SYNE3Q6ZMZ3 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.45□□□□□ -1.7
SYNE3Q6ZMZ3 AC024560.3-201ENST00000608482 349 ntBASIC4.45□□□□□ -1.7
SYNE3Q6ZMZ3 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
SYNE3Q6ZMZ3 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.45□□□□□ -1.7
SYNE3Q6ZMZ3 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.45□□□□□ -1.7
SYNE3Q6ZMZ3 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SYNE3Q6ZMZ3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SYNE3Q6ZMZ3 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 RNA5SP479-201ENST00000364858 117 ntBASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 U3.15-201ENST00000365398 212 ntBASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 AL024474.1-201ENST00000404655 591 ntBASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 AC019178.2-201ENST00000423595 505 ntBASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 AC234781.2-201ENST00000426370 994 ntBASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 MTND4P6-201ENST00000438297 472 ntBASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 VN1R10P-201ENST00000447106 875 ntBASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 AC006480.1-201ENST00000449887 378 ntBASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 AC026410.2-201ENST00000460281 156 ntBASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 RPL37P6-202ENST00000464216 403 ntBASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 AC092757.1-201ENST00000467293 467 ntBASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 AC114981.1-201ENST00000503897 678 ntBASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 AC008127.2-201ENST00000549925 1075 ntBASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 AC084824.1-201ENST00000550917 1005 ntBASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 AL596327.1-201ENST00000603629 213 ntBASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 BRDTP1-201ENST00000605735 677 ntBASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 AC243773.3-201ENST00000613270 256 ntBASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 AC099669.2-201ENST00000616549 437 ntBASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 AL607023.1-201ENST00000620045 248 ntBASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 AC091905.1-201ENST00000624400 311 ntBASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms