Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 RNY4P24-201ENST00000362735 96 ntBASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 RNA5SP123-201ENST00000363244 119 ntBASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 RNU6-173P-201ENST00000364215 104 ntBASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 HMGN1P14-201ENST00000412459 517 ntBASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 CDK8P2-201ENST00000415020 547 ntBASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 CRYBB2P1-203ENST00000415709 538 ntBASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 CYCSP43-201ENST00000438233 310 ntBASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 HMGB1P12-201ENST00000438594 598 ntBASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 RPL34P20-201ENST00000442771 351 ntBASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 AL354714.3-201ENST00000447284 493 ntBASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 AC234775.1-201ENST00000454247 670 ntBASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 DNAJC19P1-201ENST00000455312 319 ntBASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 RPL23AP31-201ENST00000456160 467 ntBASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 HMGN2P16-201ENST00000456802 261 ntBASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 AP1S2P1-201ENST00000457344 379 ntBASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 BX284632.1-201ENST00000478218 541 ntBASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 AC209154.1-201ENST00000582156 337 ntBASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 MIR4691-201ENST00000583764 85 ntBASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 AP001330.4-201ENST00000604350 154 ntBASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 AC090425.2-201ENST00000608818 501 ntBASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 AL355472.4-201ENST00000610233 626 ntBASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 AC023043.4-201ENST00000612081 449 ntBASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 AC100793.4-201ENST00000613683 429 ntBASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 TEX21P-201ENST00000447107 1476 ntBASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 AC011460.1-201ENST00000636268 1834 ntBASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.69
PPP4R4Q6NUP7 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 MIR448-201ENST00000362131 111 ntBASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 RNU6-1119P-201ENST00000384349 108 ntBASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 AC097374.1-203ENST00000400783 485 ntBASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 RPS3AP24-201ENST00000407896 734 ntBASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 MTND1P21-201ENST00000412991 285 ntBASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 OR4K11P-201ENST00000431829 904 ntBASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 RPS23P1-201ENST00000491662 432 ntBASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 AC140172.1-201ENST00000502928 141 ntBASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 RNA5SP468-201ENST00000516782 93 ntBASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 PAICSP4-201ENST00000517543 1253 ntBASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 OR5M7P-201ENST00000526140 972 ntBASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 AC022878.1-201ENST00000530684 149 ntBASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 TOMM20P2-201ENST00000540082 421 ntBASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 AGGF1P4-201ENST00000568249 801 ntBASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 AC005771.1-201ENST00000585581 349 ntBASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 BDH2P1-201ENST00000602288 736 ntBASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 AC146944.4-201ENST00000602697 718 ntBASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 AC108747.1-201ENST00000609508 535 ntBASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 AL450472.3-201ENST00000615578 367 ntBASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 AC244258.1-201ENST00000637553 1071 ntBASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.52□□□□□ -1.69
PPP4R4Q6NUP7 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms