Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC068790.6-201ENST00000602558 258 ntBASIC4.4□□□□□ -1.71
RNF220Q5VTB9 AL031666.3-201ENST00000609320 1006 ntBASIC4.4□□□□□ -1.71
RNF220Q5VTB9 AC007497.1-201ENST00000610421 561 ntBASIC4.4□□□□□ -1.71
RNF220Q5VTB9 BX664608.1-201ENST00000610519 487 ntBASIC4.4□□□□□ -1.71
RNF220Q5VTB9 AC013562.2-201ENST00000611632 603 ntBASIC4.4□□□□□ -1.71
RNF220Q5VTB9 MIR6862-1-201ENST00000613016 70 ntBASIC4.4□□□□□ -1.71
RNF220Q5VTB9 MIR6862-2-201ENST00000614755 70 ntBASIC4.4□□□□□ -1.71
RNF220Q5VTB9 AC091905.4-201ENST00000623432 202 ntBASIC4.4□□□□□ -1.71
RNF220Q5VTB9 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.4□□□□□ -1.71
RNF220Q5VTB9 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RNF220Q5VTB9 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RNF220Q5VTB9 ZNF962P-201ENST00000443465 3140 ntBASIC4.4□□□□□ -1.71
RNF220Q5VTB9 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
RNF220Q5VTB9 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
RNF220Q5VTB9 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.4□□□□□ -1.71
RNF220Q5VTB9 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.4□□□□□ -1.71
RNF220Q5VTB9 AC092447.7-201ENST00000422212 1621 ntBASIC4.39□□□□□ -1.71
RNF220Q5VTB9 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.39□□□□□ -1.71
RNF220Q5VTB9 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RNF220Q5VTB9 A2MP1-204ENST00000566278 4130 ntBASIC4.39□□□□□ -1.71
RNF220Q5VTB9 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNF220Q5VTB9 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.39□□□□□ -1.71
RNF220Q5VTB9 RNA5SP507-201ENST00000363603 121 ntBASIC4.39□□□□□ -1.71
RNF220Q5VTB9 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNF220Q5VTB9 RNU6-629P-201ENST00000384061 103 ntBASIC4.39□□□□□ -1.71
RNF220Q5VTB9 SNORD3H-201ENST00000384486 214 ntBASIC4.39□□□□□ -1.71
RNF220Q5VTB9 U3.30-201ENST00000391308 210 ntBASIC4.39□□□□□ -1.71
RNF220Q5VTB9 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.39□□□□□ -1.71
RNF220Q5VTB9 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.39□□□□□ -1.71
RNF220Q5VTB9 CHEK2P3-201ENST00000416118 248 ntBASIC4.39□□□□□ -1.71
RNF220Q5VTB9 EI24P1-201ENST00000416584 867 ntBASIC4.39□□□□□ -1.71
RNF220Q5VTB9 AC093162.1-201ENST00000419682 124 ntBASIC4.39□□□□□ -1.71
RNF220Q5VTB9 AL645608.4-201ENST00000423619 154 ntBASIC4.39□□□□□ -1.71
RNF220Q5VTB9 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.39□□□□□ -1.71
RNF220Q5VTB9 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.39□□□□□ -1.71
RNF220Q5VTB9 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.39□□□□□ -1.71
RNF220Q5VTB9 AL121871.1-201ENST00000443413 436 ntBASIC4.39□□□□□ -1.71
RNF220Q5VTB9 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.39□□□□□ -1.71
RNF220Q5VTB9 GAPDHP17-201ENST00000449858 1001 ntBASIC4.39□□□□□ -1.71
RNF220Q5VTB9 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.39□□□□□ -1.71
RNF220Q5VTB9 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.39□□□□□ -1.71
RNF220Q5VTB9 RPSAP50-201ENST00000481955 852 ntBASIC4.39□□□□□ -1.71
RNF220Q5VTB9 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.39□□□□□ -1.71
RNF220Q5VTB9 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RNF220Q5VTB9 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.39□□□□□ -1.71
RNF220Q5VTB9 Y_RNA.672-201ENST00000516289 104 ntBASIC4.39□□□□□ -1.71
RNF220Q5VTB9 RNU1-6P-201ENST00000516290 144 ntBASIC4.39□□□□□ -1.71
RNF220Q5VTB9 SCARNA21.2-201ENST00000516600 166 ntBASIC4.39□□□□□ -1.71
RNF220Q5VTB9 AP003181.2-201ENST00000528941 181 ntBASIC4.39□□□□□ -1.71
RNF220Q5VTB9 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.39□□□□□ -1.71
RNF220Q5VTB9 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC4.39□□□□□ -1.71
RNF220Q5VTB9 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.39□□□□□ -1.71
RNF220Q5VTB9 ZNF415P1-201ENST00000582279 1166 ntBASIC4.39□□□□□ -1.71
RNF220Q5VTB9 AC022726.1-201ENST00000587475 207 ntBASIC4.39□□□□□ -1.71
RNF220Q5VTB9 AC010928.3-201ENST00000587712 541 ntBASIC4.39□□□□□ -1.71
RNF220Q5VTB9 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.39□□□□□ -1.71
RNF220Q5VTB9 AC087763.1-201ENST00000603391 286 ntBASIC4.39□□□□□ -1.71
RNF220Q5VTB9 AC099842.1-201ENST00000619919 596 ntBASIC4.39□□□□□ -1.71
RNF220Q5VTB9 AC112204.3-201ENST00000623822 332 ntBASIC4.39□□□□□ -1.71
RNF220Q5VTB9 AL359740.1-201ENST00000624340 592 ntBASIC4.39□□□□□ -1.71
RNF220Q5VTB9 PISRT1-201ENST00000626175 531 ntBASIC4.39□□□□□ -1.71
RNF220Q5VTB9 AC244258.1-201ENST00000637553 1071 ntBASIC4.39□□□□□ -1.71
RNF220Q5VTB9 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNF220Q5VTB9 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RNF220Q5VTB9 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.39□□□□□ -1.71
RNF220Q5VTB9 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RNF220Q5VTB9 C4BPAP1-201ENST00000415474 1893 ntBASIC4.39□□□□□ -1.71
RNF220Q5VTB9 AL645937.1-201ENST00000641739 1652 ntBASIC4.38□□□□□ -1.71
RNF220Q5VTB9 AC004925.1-201ENST00000624256 2706 ntBASIC4.38□□□□□ -1.71
RNF220Q5VTB9 GNG5P1-201ENST00000255500 204 ntBASIC4.38□□□□□ -1.71
RNF220Q5VTB9 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.38□□□□□ -1.71
RNF220Q5VTB9 RNY4P34-201ENST00000364779 95 ntBASIC4.38□□□□□ -1.71
RNF220Q5VTB9 RNA5SP235-201ENST00000365411 114 ntBASIC4.38□□□□□ -1.71
RNF220Q5VTB9 AC092642.1-201ENST00000392417 425 ntBASIC4.38□□□□□ -1.71
RNF220Q5VTB9 RN7SKP229-201ENST00000410465 302 ntBASIC4.38□□□□□ -1.71
RNF220Q5VTB9 RNU2-66P-201ENST00000410650 161 ntBASIC4.38□□□□□ -1.71
RNF220Q5VTB9 RNU2-8P-201ENST00000410727 190 ntBASIC4.38□□□□□ -1.71
RNF220Q5VTB9 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.38□□□□□ -1.71
RNF220Q5VTB9 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.38□□□□□ -1.71
RNF220Q5VTB9 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.38□□□□□ -1.71
RNF220Q5VTB9 AL589872.1-201ENST00000426602 288 ntBASIC4.38□□□□□ -1.71
RNF220Q5VTB9 AL732292.1-201ENST00000426692 226 ntBASIC4.38□□□□□ -1.71
RNF220Q5VTB9 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.38□□□□□ -1.71
RNF220Q5VTB9 OR4K11P-201ENST00000431829 904 ntBASIC4.38□□□□□ -1.71
RNF220Q5VTB9 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.38□□□□□ -1.71
RNF220Q5VTB9 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.38□□□□□ -1.71
RNF220Q5VTB9 MTCYBP1-201ENST00000454315 1119 ntBASIC4.38□□□□□ -1.71
RNF220Q5VTB9 AURKAPS2-201ENST00000454983 333 ntBASIC4.38□□□□□ -1.71
RNF220Q5VTB9 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.38□□□□□ -1.71
RNF220Q5VTB9 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.38□□□□□ -1.71
RNF220Q5VTB9 AC025164.1-201ENST00000496249 478 ntBASIC4.38□□□□□ -1.71
RNF220Q5VTB9 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.38□□□□□ -1.71
RNF220Q5VTB9 AC007016.1-201ENST00000512110 244 ntBASIC4.38□□□□□ -1.71
RNF220Q5VTB9 RNU2-46P-201ENST00000517038 113 ntBASIC4.38□□□□□ -1.71
RNF220Q5VTB9 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.38□□□□□ -1.71
RNF220Q5VTB9 AP003033.1-201ENST00000527244 415 ntBASIC4.38□□□□□ -1.71
RNF220Q5VTB9 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.38□□□□□ -1.71
RNF220Q5VTB9 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.38□□□□□ -1.71
RNF220Q5VTB9 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
RNF220Q5VTB9 AC107016.1-201ENST00000550463 337 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms