Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 AC107871.2-201ENST00000612894 502 ntBASIC3.16□□□□□ -1.9
NUP188Q5SRE5 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NUP188Q5SRE5 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
NUP188Q5SRE5 PNPT1P2-201ENST00000456768 2050 ntBASIC3.16□□□□□ -1.9
NUP188Q5SRE5 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.16□□□□□ -1.9
NUP188Q5SRE5 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
NUP188Q5SRE5 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NUP188Q5SRE5 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NUP188Q5SRE5 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.16□□□□□ -1.9
NUP188Q5SRE5 RNA5SP210-201ENST00000391034 120 ntBASIC3.16□□□□□ -1.9
NUP188Q5SRE5 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.16□□□□□ -1.9
NUP188Q5SRE5 RWDD4P2-201ENST00000426392 563 ntBASIC3.16□□□□□ -1.9
NUP188Q5SRE5 AC091179.1-201ENST00000461606 579 ntBASIC3.16□□□□□ -1.9
NUP188Q5SRE5 RPL9P33-201ENST00000484311 566 ntBASIC3.16□□□□□ -1.9
NUP188Q5SRE5 RWDD4P1-201ENST00000488019 565 ntBASIC3.16□□□□□ -1.9
NUP188Q5SRE5 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.16□□□□□ -1.9
NUP188Q5SRE5 AP001207.1-201ENST00000524051 481 ntBASIC3.16□□□□□ -1.9
NUP188Q5SRE5 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.16□□□□□ -1.9
NUP188Q5SRE5 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.16□□□□□ -1.9
NUP188Q5SRE5 AC074029.1-201ENST00000552531 1044 ntBASIC3.16□□□□□ -1.9
NUP188Q5SRE5 OR4U1P-201ENST00000554958 912 ntBASIC3.16□□□□□ -1.9
NUP188Q5SRE5 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.16□□□□□ -1.9
NUP188Q5SRE5 MIR6873-201ENST00000622788 63 ntBASIC3.16□□□□□ -1.9
NUP188Q5SRE5 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
NUP188Q5SRE5 U8.13-201ENST00000390842 128 ntBASIC3.15□□□□□ -1.91
NUP188Q5SRE5 RNA5SP129-201ENST00000410276 118 ntBASIC3.15□□□□□ -1.91
NUP188Q5SRE5 AC010881.1-201ENST00000433830 235 ntBASIC3.15□□□□□ -1.91
NUP188Q5SRE5 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
NUP188Q5SRE5 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.15□□□□□ -1.91
NUP188Q5SRE5 RPL23AP42-201ENST00000471152 471 ntBASIC3.15□□□□□ -1.91
NUP188Q5SRE5 AP000893.1-201ENST00000474462 794 ntBASIC3.15□□□□□ -1.91
NUP188Q5SRE5 RPL36AP51-201ENST00000487216 318 ntBASIC3.15□□□□□ -1.91
NUP188Q5SRE5 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.15□□□□□ -1.91
NUP188Q5SRE5 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
NUP188Q5SRE5 RNA5SP281-201ENST00000516504 135 ntBASIC3.15□□□□□ -1.91
NUP188Q5SRE5 OR4A45P-201ENST00000529954 901 ntBASIC3.15□□□□□ -1.91
NUP188Q5SRE5 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.15□□□□□ -1.91
NUP188Q5SRE5 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.15□□□□□ -1.91
NUP188Q5SRE5 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
NUP188Q5SRE5 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
NUP188Q5SRE5 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
NUP188Q5SRE5 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
NUP188Q5SRE5 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
NUP188Q5SRE5 MIR365B-201ENST00000362317 111 ntBASIC3.14□□□□□ -1.91
NUP188Q5SRE5 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NUP188Q5SRE5 MIR7-2-201ENST00000384970 110 ntBASIC3.14□□□□□ -1.91
NUP188Q5SRE5 RPS20P25-201ENST00000412447 352 ntBASIC3.14□□□□□ -1.91
NUP188Q5SRE5 Z82205.1-201ENST00000428456 297 ntBASIC3.14□□□□□ -1.91
NUP188Q5SRE5 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.14□□□□□ -1.91
NUP188Q5SRE5 Z98742.2-201ENST00000431564 187 ntBASIC3.14□□□□□ -1.91
NUP188Q5SRE5 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.14□□□□□ -1.91
NUP188Q5SRE5 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.14□□□□□ -1.91
NUP188Q5SRE5 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.14□□□□□ -1.91
NUP188Q5SRE5 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.14□□□□□ -1.91
NUP188Q5SRE5 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.14□□□□□ -1.91
NUP188Q5SRE5 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.14□□□□□ -1.91
NUP188Q5SRE5 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NUP188Q5SRE5 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NUP188Q5SRE5 NPM1P10-201ENST00000398310 865 ntBASIC3.13□□□□□ -1.91
NUP188Q5SRE5 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.13□□□□□ -1.91
NUP188Q5SRE5 SNORA31.1-201ENST00000515993 133 ntBASIC3.13□□□□□ -1.91
NUP188Q5SRE5 SNORA31.5-201ENST00000516190 133 ntBASIC3.13□□□□□ -1.91
NUP188Q5SRE5 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NUP188Q5SRE5 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.13□□□□□ -1.91
NUP188Q5SRE5 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.13□□□□□ -1.91
NUP188Q5SRE5 AC069234.5-201ENST00000611056 416 ntBASIC3.13□□□□□ -1.91
NUP188Q5SRE5 Z73965.1-201ENST00000623412 2297 ntBASIC3.13□□□□□ -1.91
NUP188Q5SRE5 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
NUP188Q5SRE5 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
NUP188Q5SRE5 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.13□□□□□ -1.91
NUP188Q5SRE5 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
NUP188Q5SRE5 RNA5SP213-201ENST00000391031 106 ntBASIC3.13□□□□□ -1.91
NUP188Q5SRE5 AC013470.3-201ENST00000420252 1194 ntBASIC3.13□□□□□ -1.91
NUP188Q5SRE5 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.13□□□□□ -1.91
NUP188Q5SRE5 HMGB1P48-201ENST00000446155 598 ntBASIC3.13□□□□□ -1.91
NUP188Q5SRE5 RPL23AP45-201ENST00000476406 468 ntBASIC3.13□□□□□ -1.91
NUP188Q5SRE5 FAM92A1P2-202ENST00000504766 877 ntBASIC3.13□□□□□ -1.91
NUP188Q5SRE5 RPL23AP84-201ENST00000571193 464 ntBASIC3.13□□□□□ -1.91
NUP188Q5SRE5 MIR5092-201ENST00000583139 88 ntBASIC3.13□□□□□ -1.91
NUP188Q5SRE5 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
NUP188Q5SRE5 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NUP188Q5SRE5 AC069528.2-201ENST00000624849 1991 ntBASIC3.13□□□□□ -1.91
NUP188Q5SRE5 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.12□□□□□ -1.91
NUP188Q5SRE5 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NUP188Q5SRE5 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.12□□□□□ -1.91
NUP188Q5SRE5 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.12□□□□□ -1.91
NUP188Q5SRE5 AL162578.1-201ENST00000406202 378 ntBASIC3.12□□□□□ -1.91
NUP188Q5SRE5 AC244505.4-201ENST00000434905 287 ntBASIC3.12□□□□□ -1.91
NUP188Q5SRE5 SSXP5-201ENST00000443473 287 ntBASIC3.12□□□□□ -1.91
NUP188Q5SRE5 AC103975.1-201ENST00000482506 483 ntBASIC3.12□□□□□ -1.91
NUP188Q5SRE5 AC106872.3-201ENST00000495104 446 ntBASIC3.12□□□□□ -1.91
NUP188Q5SRE5 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
NUP188Q5SRE5 AC093331.1-201ENST00000521474 169 ntBASIC3.12□□□□□ -1.91
NUP188Q5SRE5 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.12□□□□□ -1.91
NUP188Q5SRE5 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.12□□□□□ -1.91
NUP188Q5SRE5 CBX3P5-201ENST00000552017 521 ntBASIC3.12□□□□□ -1.91
NUP188Q5SRE5 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.12□□□□□ -1.91
NUP188Q5SRE5 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.12□□□□□ -1.91
NUP188Q5SRE5 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NUP188Q5SRE5 GABPAP-201ENST00000419271 1356 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms