Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
RFX7Q2KHR2 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RFX7Q2KHR2 AC080125.1-201ENST00000414888 684 ntBASIC3.13□□□□□ -1.91
RFX7Q2KHR2 RPLP0P7-201ENST00000416050 667 ntBASIC3.13□□□□□ -1.91
RFX7Q2KHR2 CACYBPP1-201ENST00000438592 684 ntBASIC3.13□□□□□ -1.91
RFX7Q2KHR2 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.13□□□□□ -1.91
RFX7Q2KHR2 NECAP1P2-201ENST00000455668 727 ntBASIC3.13□□□□□ -1.91
RFX7Q2KHR2 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
RFX7Q2KHR2 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.13□□□□□ -1.91
RFX7Q2KHR2 TMEM248P1-201ENST00000510579 951 ntBASIC3.13□□□□□ -1.91
RFX7Q2KHR2 AC096725.1-201ENST00000514266 313 ntBASIC3.13□□□□□ -1.91
RFX7Q2KHR2 RN7SKP82-201ENST00000516786 223 ntBASIC3.13□□□□□ -1.91
RFX7Q2KHR2 ELOCP31-201ENST00000540463 467 ntBASIC3.13□□□□□ -1.91
RFX7Q2KHR2 AC010198.2-201ENST00000550612 259 ntBASIC3.13□□□□□ -1.91
RFX7Q2KHR2 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.13□□□□□ -1.91
RFX7Q2KHR2 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.13□□□□□ -1.91
RFX7Q2KHR2 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.13□□□□□ -1.91
RFX7Q2KHR2 TUG1_1.1-201ENST00000610654 145 ntBASIC3.13□□□□□ -1.91
RFX7Q2KHR2 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
RFX7Q2KHR2 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RFX7Q2KHR2 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.12□□□□□ -1.91
RFX7Q2KHR2 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.12□□□□□ -1.91
RFX7Q2KHR2 HSPE1P28-201ENST00000443139 211 ntBASIC3.12□□□□□ -1.91
RFX7Q2KHR2 AC010095.1-201ENST00000443543 144 ntBASIC3.12□□□□□ -1.91
RFX7Q2KHR2 VN1R48P-201ENST00000448149 1036 ntBASIC3.12□□□□□ -1.91
RFX7Q2KHR2 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.12□□□□□ -1.91
RFX7Q2KHR2 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.12□□□□□ -1.91
RFX7Q2KHR2 AC093663.2-201ENST00000484625 313 ntBASIC3.12□□□□□ -1.91
RFX7Q2KHR2 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.12□□□□□ -1.91
RFX7Q2KHR2 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.12□□□□□ -1.91
RFX7Q2KHR2 AC005351.1-201ENST00000511152 786 ntBASIC3.12□□□□□ -1.91
RFX7Q2KHR2 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.12□□□□□ -1.91
RFX7Q2KHR2 AC091488.1-201ENST00000604239 660 ntBASIC3.12□□□□□ -1.91
RFX7Q2KHR2 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.12□□□□□ -1.91
RFX7Q2KHR2 MTND5P7-201ENST00000413558 1798 ntBASIC3.12□□□□□ -1.91
RFX7Q2KHR2 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
RFX7Q2KHR2 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RFX7Q2KHR2 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
RFX7Q2KHR2 MIR887-201ENST00000401258 79 ntBASIC3.12□□□□□ -1.91
RFX7Q2KHR2 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.12□□□□□ -1.91
RFX7Q2KHR2 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.12□□□□□ -1.91
RFX7Q2KHR2 AL590639.1-201ENST00000456484 337 ntBASIC3.12□□□□□ -1.91
RFX7Q2KHR2 ARPC3P2-201ENST00000457786 533 ntBASIC3.12□□□□□ -1.91
RFX7Q2KHR2 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.12□□□□□ -1.91
RFX7Q2KHR2 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.12□□□□□ -1.91
RFX7Q2KHR2 OR5AK3P-201ENST00000527486 1297 ntBASIC3.12□□□□□ -1.91
RFX7Q2KHR2 UBTFL10-201ENST00000528532 562 ntBASIC3.12□□□□□ -1.91
RFX7Q2KHR2 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RFX7Q2KHR2 EIF5A2P1-201ENST00000564027 460 ntBASIC3.12□□□□□ -1.91
RFX7Q2KHR2 MIR4474-201ENST00000579189 78 ntBASIC3.12□□□□□ -1.91
RFX7Q2KHR2 LLPHP1-201ENST00000603571 367 ntBASIC3.12□□□□□ -1.91
RFX7Q2KHR2 AL136164.4-201ENST00000625013 2135 ntBASIC3.12□□□□□ -1.91
RFX7Q2KHR2 CRYM-AS1-204ENST00000637983 556 ntBASIC3.12□□□□□ -1.91
RFX7Q2KHR2 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RFX7Q2KHR2 AC046144.1-201ENST00000478559 1853 ntBASIC3.11□□□□□ -1.91
RFX7Q2KHR2 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.11□□□□□ -1.91
RFX7Q2KHR2 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.11□□□□□ -1.91
RFX7Q2KHR2 SNORD62.1-201ENST00000362541 86 ntBASIC3.11□□□□□ -1.91
RFX7Q2KHR2 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.11□□□□□ -1.91
RFX7Q2KHR2 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.11□□□□□ -1.91
RFX7Q2KHR2 MTCO1P43-201ENST00000431831 488 ntBASIC3.11□□□□□ -1.91
RFX7Q2KHR2 HNRNPDLP3-201ENST00000456745 380 ntBASIC3.11□□□□□ -1.91
RFX7Q2KHR2 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.11□□□□□ -1.91
RFX7Q2KHR2 AC078918.1-201ENST00000498515 228 ntBASIC3.11□□□□□ -1.91
RFX7Q2KHR2 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.11□□□□□ -1.91
RFX7Q2KHR2 AC008549.1-201ENST00000512900 643 ntBASIC3.11□□□□□ -1.91
RFX7Q2KHR2 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.11□□□□□ -1.91
RFX7Q2KHR2 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.11□□□□□ -1.91
RFX7Q2KHR2 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.11□□□□□ -1.91
RFX7Q2KHR2 AC105429.2-201ENST00000610567 517 ntBASIC3.11□□□□□ -1.91
RFX7Q2KHR2 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RFX7Q2KHR2 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RFX7Q2KHR2 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
RFX7Q2KHR2 AP000526.1-201ENST00000603308 1388 ntBASIC3.1□□□□□ -1.91
RFX7Q2KHR2 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
RFX7Q2KHR2 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RFX7Q2KHR2 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
RFX7Q2KHR2 HMGB1P10-201ENST00000395823 563 ntBASIC3.1□□□□□ -1.91
RFX7Q2KHR2 ATF1P1-201ENST00000406040 927 ntBASIC3.1□□□□□ -1.91
RFX7Q2KHR2 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.1□□□□□ -1.91
RFX7Q2KHR2 RPL36AP6-201ENST00000435770 321 ntBASIC3.1□□□□□ -1.91
RFX7Q2KHR2 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.1□□□□□ -1.91
RFX7Q2KHR2 Y_RNA.638-201ENST00000459374 113 ntBASIC3.1□□□□□ -1.91
RFX7Q2KHR2 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.1□□□□□ -1.91
RFX7Q2KHR2 AP003122.3-201ENST00000526316 255 ntBASIC3.1□□□□□ -1.91
RFX7Q2KHR2 AC005951.1-201ENST00000576706 485 ntBASIC3.1□□□□□ -1.91
RFX7Q2KHR2 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
RFX7Q2KHR2 AL590808.1-201ENST00000618696 141 ntBASIC3.1□□□□□ -1.91
RFX7Q2KHR2 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.1□□□□□ -1.91
RFX7Q2KHR2 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC3.1□□□□□ -1.91
RFX7Q2KHR2 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
RFX7Q2KHR2 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.09□□□□□ -1.91
RFX7Q2KHR2 SNORA70B-201ENST00000384210 135 ntBASIC3.09□□□□□ -1.92
RFX7Q2KHR2 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.09□□□□□ -1.92
RFX7Q2KHR2 RPL7P10-201ENST00000417407 739 ntBASIC3.09□□□□□ -1.92
RFX7Q2KHR2 RPL21P112-201ENST00000434403 463 ntBASIC3.09□□□□□ -1.92
RFX7Q2KHR2 HMGB1P12-201ENST00000438594 598 ntBASIC3.09□□□□□ -1.92
RFX7Q2KHR2 RPL23AP15-201ENST00000450202 459 ntBASIC3.09□□□□□ -1.92
RFX7Q2KHR2 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.09□□□□□ -1.92
RFX7Q2KHR2 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.09□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 157.2 ms