Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.48□□□□□ -2.01
FOXF1Q12946 AC096576.1-201ENST00000489014 359 ntBASIC2.48□□□□□ -2.01
FOXF1Q12946 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC2.48□□□□□ -2.01
FOXF1Q12946 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.48□□□□□ -2.01
FOXF1Q12946 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.48□□□□□ -2.01
FOXF1Q12946 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.48□□□□□ -2.01
FOXF1Q12946 SNORA31.26-201ENST00000517250 137 ntBASIC2.48□□□□□ -2.01
FOXF1Q12946 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.48□□□□□ -2.01
FOXF1Q12946 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
FOXF1Q12946 AL133271.1-201ENST00000538229 291 ntBASIC2.48□□□□□ -2.01
FOXF1Q12946 OR6C73P-201ENST00000546432 358 ntBASIC2.48□□□□□ -2.01
FOXF1Q12946 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.48□□□□□ -2.01
FOXF1Q12946 POLR2KP1-201ENST00000553226 168 ntBASIC2.48□□□□□ -2.01
FOXF1Q12946 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC2.48□□□□□ -2.01
FOXF1Q12946 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.48□□□□□ -2.01
FOXF1Q12946 AC096947.1-201ENST00000603233 470 ntBASIC2.48□□□□□ -2.01
FOXF1Q12946 MIR7106-201ENST00000612419 65 ntBASIC2.48□□□□□ -2.01
FOXF1Q12946 AC121761.2-201ENST00000617300 689 ntBASIC2.48□□□□□ -2.01
FOXF1Q12946 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.48□□□□□ -2.01
FOXF1Q12946 MIR4496-201ENST00000635896 61 ntBASIC2.48□□□□□ -2.01
FOXF1Q12946 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.48□□□□□ -2.01
FOXF1Q12946 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
FOXF1Q12946 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
FOXF1Q12946 AC011978.2-201ENST00000569835 2054 ntBASIC2.48□□□□□ -2.01
FOXF1Q12946 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
FOXF1Q12946 AL136164.4-201ENST00000625013 2135 ntBASIC2.47□□□□□ -2.01
FOXF1Q12946 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
FOXF1Q12946 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.47□□□□□ -2.01
FOXF1Q12946 METTL21EP-201ENST00000298105 713 ntBASIC2.47□□□□□ -2.01
FOXF1Q12946 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
FOXF1Q12946 RNA5SP391-201ENST00000363456 119 ntBASIC2.47□□□□□ -2.01
FOXF1Q12946 RNU1-112P-201ENST00000364401 164 ntBASIC2.47□□□□□ -2.01
FOXF1Q12946 RNU6-7-201ENST00000364784 107 ntBASIC2.47□□□□□ -2.01
FOXF1Q12946 RNU6-8-201ENST00000365467 107 ntBASIC2.47□□□□□ -2.01
FOXF1Q12946 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.47□□□□□ -2.01
FOXF1Q12946 DNAJC19P6-201ENST00000401853 280 ntBASIC2.47□□□□□ -2.01
FOXF1Q12946 NDUFB4P4-201ENST00000404822 243 ntBASIC2.47□□□□□ -2.01
FOXF1Q12946 RNA5SP21-201ENST00000410917 96 ntBASIC2.47□□□□□ -2.01
FOXF1Q12946 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.47□□□□□ -2.01
FOXF1Q12946 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.47□□□□□ -2.01
FOXF1Q12946 OR4K6P-201ENST00000416478 897 ntBASIC2.47□□□□□ -2.01
FOXF1Q12946 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.47□□□□□ -2.01
FOXF1Q12946 MTCO1P43-201ENST00000431831 488 ntBASIC2.47□□□□□ -2.01
FOXF1Q12946 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.47□□□□□ -2.01
FOXF1Q12946 COX6CP2-201ENST00000444980 225 ntBASIC2.47□□□□□ -2.01
FOXF1Q12946 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.47□□□□□ -2.01
FOXF1Q12946 ARPC3P2-201ENST00000457786 533 ntBASIC2.47□□□□□ -2.01
FOXF1Q12946 AC104687.1-201ENST00000485829 412 ntBASIC2.47□□□□□ -2.01
FOXF1Q12946 DYNLL1P6-201ENST00000503440 264 ntBASIC2.47□□□□□ -2.01
FOXF1Q12946 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.47□□□□□ -2.01
FOXF1Q12946 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.47□□□□□ -2.01
FOXF1Q12946 GMPSP1-201ENST00000514075 579 ntBASIC2.47□□□□□ -2.01
FOXF1Q12946 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC2.47□□□□□ -2.01
FOXF1Q12946 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.47□□□□□ -2.01
FOXF1Q12946 COX6CP8-201ENST00000522620 226 ntBASIC2.47□□□□□ -2.01
FOXF1Q12946 AP000857.1-201ENST00000532151 543 ntBASIC2.47□□□□□ -2.01
FOXF1Q12946 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.47□□□□□ -2.01
FOXF1Q12946 AC093014.1-201ENST00000548926 724 ntBASIC2.47□□□□□ -2.01
FOXF1Q12946 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.47□□□□□ -2.01
FOXF1Q12946 AC106782.4-201ENST00000568264 210 ntBASIC2.47□□□□□ -2.01
FOXF1Q12946 AC010653.1-201ENST00000571108 881 ntBASIC2.47□□□□□ -2.01
FOXF1Q12946 MTCO3P13-201ENST00000577757 781 ntBASIC2.47□□□□□ -2.01
FOXF1Q12946 MIR4474-201ENST00000579189 78 ntBASIC2.47□□□□□ -2.01
FOXF1Q12946 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
FOXF1Q12946 CBX3P2-202ENST00000583365 535 ntBASIC2.47□□□□□ -2.01
FOXF1Q12946 AC006504.3-201ENST00000586818 523 ntBASIC2.47□□□□□ -2.01
FOXF1Q12946 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.47□□□□□ -2.01
FOXF1Q12946 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.47□□□□□ -2.01
FOXF1Q12946 AC008277.2-201ENST00000605196 797 ntBASIC2.47□□□□□ -2.01
FOXF1Q12946 AC007619.2-201ENST00000605743 379 ntBASIC2.47□□□□□ -2.01
FOXF1Q12946 AC113194.1-201ENST00000606037 500 ntBASIC2.47□□□□□ -2.01
FOXF1Q12946 AC131902.3-201ENST00000611767 581 ntBASIC2.47□□□□□ -2.01
FOXF1Q12946 CR589904.2-201ENST00000612533 440 ntBASIC2.47□□□□□ -2.01
FOXF1Q12946 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.47□□□□□ -2.01
FOXF1Q12946 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
FOXF1Q12946 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.47□□□□□ -2.01
FOXF1Q12946 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.47□□□□□ -2.01
FOXF1Q12946 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.47□□□□□ -2.01
FOXF1Q12946 AL365361.1-201ENST00000566942 3481 ntBASIC2.47□□□□□ -2.01
FOXF1Q12946 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.46□□□□□ -2.02
FOXF1Q12946 MTCO1P24-201ENST00000515438 1558 ntBASIC2.46□□□□□ -2.02
FOXF1Q12946 AL157700.1-201ENST00000561973 1432 ntBASIC2.46□□□□□ -2.02
FOXF1Q12946 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
FOXF1Q12946 RNU6-525P-201ENST00000363685 104 ntBASIC2.46□□□□□ -2.02
FOXF1Q12946 SNORA80A-201ENST00000363922 136 ntBASIC2.46□□□□□ -2.02
FOXF1Q12946 SAR1AP2-201ENST00000392696 594 ntBASIC2.46□□□□□ -2.02
FOXF1Q12946 SNORD88.1-201ENST00000408684 91 ntBASIC2.46□□□□□ -2.02
FOXF1Q12946 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.46□□□□□ -2.02
FOXF1Q12946 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC2.46□□□□□ -2.02
FOXF1Q12946 AC112220.1-201ENST00000434628 355 ntBASIC2.46□□□□□ -2.02
FOXF1Q12946 MUPP-201ENST00000438111 566 ntBASIC2.46□□□□□ -2.02
FOXF1Q12946 AC090525.1-201ENST00000479116 478 ntBASIC2.46□□□□□ -2.02
FOXF1Q12946 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.46□□□□□ -2.02
FOXF1Q12946 DSTNP2-201ENST00000504533 515 ntBASIC2.46□□□□□ -2.02
FOXF1Q12946 AC093755.1-201ENST00000512950 1023 ntBASIC2.46□□□□□ -2.02
FOXF1Q12946 AC026801.2-201ENST00000515352 425 ntBASIC2.46□□□□□ -2.02
FOXF1Q12946 RN7SKP132-201ENST00000516001 208 ntBASIC2.46□□□□□ -2.02
FOXF1Q12946 HMGB1P46-201ENST00000520062 610 ntBASIC2.46□□□□□ -2.02
FOXF1Q12946 OR4A45P-201ENST00000529954 901 ntBASIC2.46□□□□□ -2.02
FOXF1Q12946 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms