Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 AC107294.3-201ENST00000609211 526 ntBASIC3.09□□□□□ -1.91
RAB40BQ12829 AC024941.1-201ENST00000612250 334 ntBASIC3.09□□□□□ -1.91
RAB40BQ12829 AC005332.6-201ENST00000613178 446 ntBASIC3.09□□□□□ -1.91
RAB40BQ12829 AC092628.2-201ENST00000622492 339 ntBASIC3.09□□□□□ -1.91
RAB40BQ12829 AL354798.1-201ENST00000622505 329 ntBASIC3.09□□□□□ -1.91
RAB40BQ12829 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.09□□□□□ -1.91
RAB40BQ12829 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
RAB40BQ12829 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
RAB40BQ12829 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RAB40BQ12829 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RAB40BQ12829 MIR372-201ENST00000362225 67 ntBASIC3.08□□□□□ -1.92
RAB40BQ12829 RNU5D-1-201ENST00000363299 116 ntBASIC3.08□□□□□ -1.92
RAB40BQ12829 RNA5SP283-201ENST00000365604 119 ntBASIC3.08□□□□□ -1.92
RAB40BQ12829 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RAB40BQ12829 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.08□□□□□ -1.92
RAB40BQ12829 MIR506-201ENST00000384998 124 ntBASIC3.08□□□□□ -1.92
RAB40BQ12829 RNU6-328P-201ENST00000390887 106 ntBASIC3.08□□□□□ -1.92
RAB40BQ12829 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RAB40BQ12829 RSL24D1P1-201ENST00000404972 493 ntBASIC3.08□□□□□ -1.92
RAB40BQ12829 RNU6-712P-201ENST00000410558 100 ntBASIC3.08□□□□□ -1.92
RAB40BQ12829 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.08□□□□□ -1.92
RAB40BQ12829 AC017079.2-201ENST00000416102 485 ntBASIC3.08□□□□□ -1.92
RAB40BQ12829 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.08□□□□□ -1.92
RAB40BQ12829 HMGB1P12-201ENST00000438594 598 ntBASIC3.08□□□□□ -1.92
RAB40BQ12829 HMGB3P11-201ENST00000440127 604 ntBASIC3.08□□□□□ -1.92
RAB40BQ12829 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.08□□□□□ -1.92
RAB40BQ12829 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.08□□□□□ -1.92
RAB40BQ12829 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.08□□□□□ -1.92
RAB40BQ12829 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.08□□□□□ -1.92
RAB40BQ12829 HMGB1P15-201ENST00000453854 435 ntBASIC3.08□□□□□ -1.92
RAB40BQ12829 BTF3P5-201ENST00000457252 467 ntBASIC3.08□□□□□ -1.92
RAB40BQ12829 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.08□□□□□ -1.92
RAB40BQ12829 MTCO3P35-201ENST00000485582 781 ntBASIC3.08□□□□□ -1.92
RAB40BQ12829 UBE2CP3-201ENST00000502715 450 ntBASIC3.08□□□□□ -1.92
RAB40BQ12829 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.08□□□□□ -1.92
RAB40BQ12829 AC010460.1-201ENST00000507087 466 ntBASIC3.08□□□□□ -1.92
RAB40BQ12829 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
RAB40BQ12829 AC004062.1-201ENST00000509926 645 ntBASIC3.08□□□□□ -1.92
RAB40BQ12829 PHBP14-201ENST00000512887 367 ntBASIC3.08□□□□□ -1.92
RAB40BQ12829 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.08□□□□□ -1.92
RAB40BQ12829 RNU6-27P-201ENST00000516146 107 ntBASIC3.08□□□□□ -1.92
RAB40BQ12829 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.08□□□□□ -1.92
RAB40BQ12829 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.08□□□□□ -1.92
RAB40BQ12829 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.08□□□□□ -1.92
RAB40BQ12829 EEF1B2P4-201ENST00000551398 348 ntBASIC3.08□□□□□ -1.92
RAB40BQ12829 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.08□□□□□ -1.92
RAB40BQ12829 AC087481.2-201ENST00000565492 330 ntBASIC3.08□□□□□ -1.92
RAB40BQ12829 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.08□□□□□ -1.92
RAB40BQ12829 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.08□□□□□ -1.92
RAB40BQ12829 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.08□□□□□ -1.92
RAB40BQ12829 AC022916.3-201ENST00000592961 742 ntBASIC3.08□□□□□ -1.92
RAB40BQ12829 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.08□□□□□ -1.92
RAB40BQ12829 AL020997.2-201ENST00000602607 184 ntBASIC3.08□□□□□ -1.92
RAB40BQ12829 AC069431.2-201ENST00000604149 1099 ntBASIC3.08□□□□□ -1.92
RAB40BQ12829 AC009269.6-201ENST00000621778 588 ntBASIC3.08□□□□□ -1.92
RAB40BQ12829 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
RAB40BQ12829 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RAB40BQ12829 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
RAB40BQ12829 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
RAB40BQ12829 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.08□□□□□ -1.92
RAB40BQ12829 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RAB40BQ12829 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.07□□□□□ -1.92
RAB40BQ12829 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.07□□□□□ -1.92
RAB40BQ12829 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.07□□□□□ -1.92
RAB40BQ12829 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RAB40BQ12829 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RAB40BQ12829 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.07□□□□□ -1.92
RAB40BQ12829 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.07□□□□□ -1.92
RAB40BQ12829 SNORA40.2-201ENST00000390847 128 ntBASIC3.07□□□□□ -1.92
RAB40BQ12829 PTMAP5-201ENST00000393073 333 ntBASIC3.07□□□□□ -1.92
RAB40BQ12829 EI24P2-201ENST00000397776 1076 ntBASIC3.07□□□□□ -1.92
RAB40BQ12829 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.07□□□□□ -1.92
RAB40BQ12829 AL161449.1-201ENST00000414531 1199 ntBASIC3.07□□□□□ -1.92
RAB40BQ12829 MRPS36P1-201ENST00000421291 307 ntBASIC3.07□□□□□ -1.92
RAB40BQ12829 AC012065.2-201ENST00000421295 375 ntBASIC3.07□□□□□ -1.92
RAB40BQ12829 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.07□□□□□ -1.92
RAB40BQ12829 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.07□□□□□ -1.92
RAB40BQ12829 FTH1P1-201ENST00000437933 532 ntBASIC3.07□□□□□ -1.92
RAB40BQ12829 MTCO1P53-201ENST00000441633 699 ntBASIC3.07□□□□□ -1.92
RAB40BQ12829 HMGN2P16-201ENST00000456802 261 ntBASIC3.07□□□□□ -1.92
RAB40BQ12829 AC108734.3-201ENST00000481241 1165 ntBASIC3.07□□□□□ -1.92
RAB40BQ12829 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.07□□□□□ -1.92
RAB40BQ12829 AL024509.2-201ENST00000493462 493 ntBASIC3.07□□□□□ -1.92
RAB40BQ12829 PRELID3BP6-201ENST00000503839 571 ntBASIC3.07□□□□□ -1.92
RAB40BQ12829 MTCYBP16-201ENST00000509187 1129 ntBASIC3.07□□□□□ -1.92
RAB40BQ12829 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.07□□□□□ -1.92
RAB40BQ12829 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RAB40BQ12829 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.07□□□□□ -1.92
RAB40BQ12829 AC026412.2-201ENST00000512270 1075 ntBASIC3.07□□□□□ -1.92
RAB40BQ12829 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.07□□□□□ -1.92
RAB40BQ12829 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.07□□□□□ -1.92
RAB40BQ12829 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RAB40BQ12829 AC093331.1-201ENST00000521474 169 ntBASIC3.07□□□□□ -1.92
RAB40BQ12829 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.07□□□□□ -1.92
RAB40BQ12829 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.07□□□□□ -1.92
RAB40BQ12829 AC125611.1-201ENST00000549563 229 ntBASIC3.07□□□□□ -1.92
RAB40BQ12829 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.07□□□□□ -1.92
RAB40BQ12829 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.07□□□□□ -1.92
RAB40BQ12829 AC037471.2-201ENST00000564941 598 ntBASIC3.07□□□□□ -1.92
RAB40BQ12829 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms