Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 RPL21P103-201ENST00000479921 488 ntBASIC3.75□□□□□ -1.81
GABPAQ06546 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.75□□□□□ -1.81
GABPAQ06546 AC008885.1-201ENST00000514930 301 ntBASIC3.75□□□□□ -1.81
GABPAQ06546 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.75□□□□□ -1.81
GABPAQ06546 PSMA2P1-201ENST00000526365 646 ntBASIC3.75□□□□□ -1.81
GABPAQ06546 MTCO3P15-201ENST00000526563 574 ntBASIC3.75□□□□□ -1.81
GABPAQ06546 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.75□□□□□ -1.81
GABPAQ06546 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.75□□□□□ -1.81
GABPAQ06546 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.75□□□□□ -1.81
GABPAQ06546 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.75□□□□□ -1.81
GABPAQ06546 AC106782.4-201ENST00000568264 210 ntBASIC3.75□□□□□ -1.81
GABPAQ06546 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.75□□□□□ -1.81
GABPAQ06546 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.75□□□□□ -1.81
GABPAQ06546 BNIP3P39-201ENST00000601077 554 ntBASIC3.75□□□□□ -1.81
GABPAQ06546 LLPHP1-201ENST00000603571 367 ntBASIC3.75□□□□□ -1.81
GABPAQ06546 AL034351.1-201ENST00000605288 668 ntBASIC3.75□□□□□ -1.81
GABPAQ06546 AC105429.2-201ENST00000610567 517 ntBASIC3.75□□□□□ -1.81
GABPAQ06546 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.75□□□□□ -1.81
GABPAQ06546 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.75□□□□□ -1.81
GABPAQ06546 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
GABPAQ06546 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
GABPAQ06546 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.75□□□□□ -1.81
GABPAQ06546 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
GABPAQ06546 MIR422A-201ENST00000362286 90 ntBASIC3.74□□□□□ -1.81
GABPAQ06546 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
GABPAQ06546 UBA52P6-201ENST00000399822 382 ntBASIC3.74□□□□□ -1.81
GABPAQ06546 AC069218.2-201ENST00000411665 344 ntBASIC3.74□□□□□ -1.81
GABPAQ06546 AC009237.5-201ENST00000414271 501 ntBASIC3.74□□□□□ -1.81
GABPAQ06546 RPL31P45-201ENST00000419532 356 ntBASIC3.74□□□□□ -1.81
GABPAQ06546 C1DP1-201ENST00000426049 402 ntBASIC3.74□□□□□ -1.81
GABPAQ06546 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.74□□□□□ -1.81
GABPAQ06546 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.74□□□□□ -1.81
GABPAQ06546 RPS26P56-201ENST00000444468 240 ntBASIC3.74□□□□□ -1.81
GABPAQ06546 NF1P3-201ENST00000457709 450 ntBASIC3.74□□□□□ -1.81
GABPAQ06546 GAPDHP39-201ENST00000481866 979 ntBASIC3.74□□□□□ -1.81
GABPAQ06546 AC119751.4-201ENST00000507498 357 ntBASIC3.74□□□□□ -1.81
GABPAQ06546 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.74□□□□□ -1.81
GABPAQ06546 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.74□□□□□ -1.81
GABPAQ06546 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.74□□□□□ -1.81
GABPAQ06546 OR8K4P-201ENST00000534608 872 ntBASIC3.74□□□□□ -1.81
GABPAQ06546 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.74□□□□□ -1.81
GABPAQ06546 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.74□□□□□ -1.81
GABPAQ06546 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
GABPAQ06546 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.74□□□□□ -1.81
GABPAQ06546 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.74□□□□□ -1.81
GABPAQ06546 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.74□□□□□ -1.81
GABPAQ06546 AC135507.2-201ENST00000612443 309 ntBASIC3.74□□□□□ -1.81
GABPAQ06546 C2orf27A-204ENST00000623058 969 ntBASIC3.74□□□□□ -1.81
GABPAQ06546 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.74□□□□□ -1.81
GABPAQ06546 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.74□□□□□ -1.81
GABPAQ06546 MIR622-201ENST00000638396 96 ntBASIC3.74□□□□□ -1.81
GABPAQ06546 ZNF663P-202ENST00000641770 1131 ntBASIC3.74□□□□□ -1.81
GABPAQ06546 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
GABPAQ06546 ELL2P4-201ENST00000446870 1376 ntBASIC3.74□□□□□ -1.81
GABPAQ06546 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
GABPAQ06546 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.73□□□□□ -1.81
GABPAQ06546 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
GABPAQ06546 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
GABPAQ06546 AP002088.1-201ENST00000382740 395 ntBASIC3.73□□□□□ -1.81
GABPAQ06546 RNU6-224P-201ENST00000384055 107 ntBASIC3.73□□□□□ -1.81
GABPAQ06546 RNU6-441P-201ENST00000384545 106 ntBASIC3.73□□□□□ -1.81
GABPAQ06546 MTCO3P31-201ENST00000405526 789 ntBASIC3.73□□□□□ -1.81
GABPAQ06546 MIR1183-201ENST00000408856 89 ntBASIC3.73□□□□□ -1.81
GABPAQ06546 RPL30P2-201ENST00000414021 291 ntBASIC3.73□□□□□ -1.81
GABPAQ06546 AC009237.2-201ENST00000421358 284 ntBASIC3.73□□□□□ -1.81
GABPAQ06546 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.73□□□□□ -1.81
GABPAQ06546 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.73□□□□□ -1.81
GABPAQ06546 CST9LP2-201ENST00000437612 320 ntBASIC3.73□□□□□ -1.81
GABPAQ06546 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.73□□□□□ -1.81
GABPAQ06546 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.73□□□□□ -1.81
GABPAQ06546 Z99127.3-201ENST00000448158 395 ntBASIC3.73□□□□□ -1.81
GABPAQ06546 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.73□□□□□ -1.81
GABPAQ06546 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.73□□□□□ -1.81
GABPAQ06546 AC079203.1-201ENST00000487972 404 ntBASIC3.73□□□□□ -1.81
GABPAQ06546 DYNLL1P6-201ENST00000503440 264 ntBASIC3.73□□□□□ -1.81
GABPAQ06546 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.73□□□□□ -1.81
GABPAQ06546 AC016065.2-201ENST00000514530 444 ntBASIC3.73□□□□□ -1.81
GABPAQ06546 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.73□□□□□ -1.81
GABPAQ06546 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.73□□□□□ -1.81
GABPAQ06546 CENPUP2-201ENST00000555897 1186 ntBASIC3.73□□□□□ -1.81
GABPAQ06546 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.73□□□□□ -1.81
GABPAQ06546 AC069431.2-201ENST00000604149 1099 ntBASIC3.73□□□□□ -1.81
GABPAQ06546 AP003973.1-201ENST00000604639 691 ntBASIC3.73□□□□□ -1.81
GABPAQ06546 AC112220.2-201ENST00000605513 533 ntBASIC3.73□□□□□ -1.81
GABPAQ06546 AP003485.1-201ENST00000625093 753 ntBASIC3.73□□□□□ -1.81
GABPAQ06546 AC099654.9-201ENST00000637055 678 ntBASIC3.73□□□□□ -1.81
GABPAQ06546 AC087821.2-201ENST00000637086 450 ntBASIC3.73□□□□□ -1.81
GABPAQ06546 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
GABPAQ06546 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
GABPAQ06546 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
GABPAQ06546 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
GABPAQ06546 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
GABPAQ06546 RPS4XP5-202ENST00000449995 1334 ntBASIC3.72□□□□□ -1.81
GABPAQ06546 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
GABPAQ06546 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
GABPAQ06546 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
GABPAQ06546 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
GABPAQ06546 AL133264.1-201ENST00000407157 562 ntBASIC3.72□□□□□ -1.81
GABPAQ06546 RNU6-55P-201ENST00000411092 107 ntBASIC3.72□□□□□ -1.81
GABPAQ06546 RNU6-954P-201ENST00000411355 107 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms