Protein–RNA interactions for Protein: Q01955

COL4A3, Collagen alpha-3(IV) chain, humanhuman

Predictions only

Length 1,670 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3Q01955 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.49□□□□□ -1.69
COL4A3Q01955 CALM1P1-201ENST00000442082 433 ntBASIC4.49□□□□□ -1.69
COL4A3Q01955 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.49□□□□□ -1.69
COL4A3Q01955 RPL23AP2-201ENST00000471227 466 ntBASIC4.49□□□□□ -1.69
COL4A3Q01955 FAM172BP-201ENST00000487497 1089 ntBASIC4.49□□□□□ -1.69
COL4A3Q01955 RPS27AP13-201ENST00000498403 237 ntBASIC4.49□□□□□ -1.69
COL4A3Q01955 HMGN1P13-201ENST00000505795 138 ntBASIC4.49□□□□□ -1.69
COL4A3Q01955 AC006390.1-201ENST00000508068 283 ntBASIC4.49□□□□□ -1.69
COL4A3Q01955 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.49□□□□□ -1.69
COL4A3Q01955 RNA5SP446-201ENST00000515955 82 ntBASIC4.49□□□□□ -1.69
COL4A3Q01955 RNA5SP49-201ENST00000516450 115 ntBASIC4.49□□□□□ -1.69
COL4A3Q01955 RN7SKP283-201ENST00000517197 270 ntBASIC4.49□□□□□ -1.69
COL4A3Q01955 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.49□□□□□ -1.69
COL4A3Q01955 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.49□□□□□ -1.69
COL4A3Q01955 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.49□□□□□ -1.69
COL4A3Q01955 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.49□□□□□ -1.69
COL4A3Q01955 HIF1AP1-201ENST00000553642 175 ntBASIC4.49□□□□□ -1.69
COL4A3Q01955 AL845331.3-202ENST00000562856 261 ntBASIC4.49□□□□□ -1.69
COL4A3Q01955 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.49□□□□□ -1.69
COL4A3Q01955 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.49□□□□□ -1.69
COL4A3Q01955 TPMTP1-201ENST00000592307 737 ntBASIC4.49□□□□□ -1.69
COL4A3Q01955 AL161729.3-201ENST00000603533 673 ntBASIC4.49□□□□□ -1.69
COL4A3Q01955 AP001836.1-201ENST00000604675 523 ntBASIC4.49□□□□□ -1.69
COL4A3Q01955 AC055876.5-201ENST00000605667 259 ntBASIC4.49□□□□□ -1.69
COL4A3Q01955 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.49□□□□□ -1.69
COL4A3Q01955 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.49□□□□□ -1.69
COL4A3Q01955 Y_RNA.812-201ENST00000610788 101 ntBASIC4.49□□□□□ -1.69
COL4A3Q01955 Y_RNA.784-201ENST00000613803 101 ntBASIC4.49□□□□□ -1.69
COL4A3Q01955 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
COL4A3Q01955 Y_RNA.787-201ENST00000616522 101 ntBASIC4.49□□□□□ -1.69
COL4A3Q01955 Y_RNA.780-201ENST00000617336 101 ntBASIC4.49□□□□□ -1.69
COL4A3Q01955 Y_RNA.801-201ENST00000619005 101 ntBASIC4.49□□□□□ -1.69
COL4A3Q01955 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.49□□□□□ -1.69
COL4A3Q01955 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL4A3Q01955 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.49□□□□□ -1.69
COL4A3Q01955 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC4.49□□□□□ -1.69
COL4A3Q01955 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL4A3Q01955 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL4A3Q01955 RLIMP1-201ENST00000339626 1680 ntBASIC4.48□□□□□ -1.69
COL4A3Q01955 AL359922.3-201ENST00000624779 1670 ntBASIC4.48□□□□□ -1.69
COL4A3Q01955 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL4A3Q01955 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL4A3Q01955 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL4A3Q01955 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL4A3Q01955 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL4A3Q01955 RNU4-79P-201ENST00000362764 141 ntBASIC4.48□□□□□ -1.69
COL4A3Q01955 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.48□□□□□ -1.69
COL4A3Q01955 AL136131.1-201ENST00000406079 803 ntBASIC4.48□□□□□ -1.69
COL4A3Q01955 RNA5SP36-201ENST00000410197 133 ntBASIC4.48□□□□□ -1.69
COL4A3Q01955 JKAMPP1-201ENST00000413804 919 ntBASIC4.48□□□□□ -1.69
COL4A3Q01955 AC017078.1-201ENST00000416146 368 ntBASIC4.48□□□□□ -1.69
COL4A3Q01955 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.48□□□□□ -1.69
COL4A3Q01955 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.48□□□□□ -1.69
COL4A3Q01955 SDCBPP2-201ENST00000424643 885 ntBASIC4.48□□□□□ -1.69
COL4A3Q01955 AL157831.1-201ENST00000426134 473 ntBASIC4.48□□□□□ -1.69
COL4A3Q01955 HMGB3P10-201ENST00000434734 572 ntBASIC4.48□□□□□ -1.69
COL4A3Q01955 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.48□□□□□ -1.69
COL4A3Q01955 RPL17P49-201ENST00000443728 411 ntBASIC4.48□□□□□ -1.69
COL4A3Q01955 AC079448.1-201ENST00000449377 373 ntBASIC4.48□□□□□ -1.69
COL4A3Q01955 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.48□□□□□ -1.69
COL4A3Q01955 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.48□□□□□ -1.69
COL4A3Q01955 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL4A3Q01955 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.48□□□□□ -1.69
COL4A3Q01955 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.48□□□□□ -1.69
COL4A3Q01955 AC010486.1-201ENST00000511793 424 ntBASIC4.48□□□□□ -1.69
COL4A3Q01955 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL4A3Q01955 FTH1P21-201ENST00000512179 511 ntBASIC4.48□□□□□ -1.69
COL4A3Q01955 AC006499.2-201ENST00000513470 337 ntBASIC4.48□□□□□ -1.69
COL4A3Q01955 RNA5SP249-201ENST00000516127 99 ntBASIC4.48□□□□□ -1.69
COL4A3Q01955 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.48□□□□□ -1.69
COL4A3Q01955 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.48□□□□□ -1.69
COL4A3Q01955 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.48□□□□□ -1.69
COL4A3Q01955 AL157394.1-201ENST00000562983 1224 ntBASIC4.48□□□□□ -1.69
COL4A3Q01955 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.48□□□□□ -1.69
COL4A3Q01955 AL359999.1-201ENST00000604513 294 ntBASIC4.48□□□□□ -1.69
COL4A3Q01955 AL161734.1-201ENST00000609720 557 ntBASIC4.48□□□□□ -1.69
COL4A3Q01955 CDRT1-208ENST00000630868 794 ntBASIC4.48□□□□□ -1.69
COL4A3Q01955 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC4.48□□□□□ -1.69
COL4A3Q01955 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.48□□□□□ -1.69
COL4A3Q01955 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL4A3Q01955 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.48□□□□□ -1.69
COL4A3Q01955 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL4A3Q01955 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
COL4A3Q01955 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL4A3Q01955 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
COL4A3Q01955 AL512646.1-201ENST00000269395 1077 ntBASIC4.48□□□□□ -1.69
COL4A3Q01955 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
COL4A3Q01955 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
COL4A3Q01955 Y_RNA.111-201ENST00000363248 100 ntBASIC4.48□□□□□ -1.69
COL4A3Q01955 RNU6-878P-201ENST00000384578 110 ntBASIC4.48□□□□□ -1.69
COL4A3Q01955 MIR491-201ENST00000384877 84 ntBASIC4.48□□□□□ -1.69
COL4A3Q01955 AC104297.1-201ENST00000393779 870 ntBASIC4.48□□□□□ -1.69
COL4A3Q01955 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL4A3Q01955 RN7SKP235-201ENST00000410662 305 ntBASIC4.48□□□□□ -1.69
COL4A3Q01955 RPS20P14-201ENST00000412545 360 ntBASIC4.48□□□□□ -1.69
COL4A3Q01955 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.48□□□□□ -1.69
COL4A3Q01955 COX6B1P7-201ENST00000430845 235 ntBASIC4.48□□□□□ -1.69
COL4A3Q01955 RPS24P8-201ENST00000431490 402 ntBASIC4.48□□□□□ -1.69
COL4A3Q01955 SNRPEP7-201ENST00000438350 220 ntBASIC4.48□□□□□ -1.69
COL4A3Q01955 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms