Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 AC023813.2-201ENST00000564321 469 ntBASIC3.32□□□□□ -1.88
RPS4XP62701 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.32□□□□□ -1.88
RPS4XP62701 AC245036.5-201ENST00000596330 847 ntBASIC3.32□□□□□ -1.88
RPS4XP62701 AC006329.2-201ENST00000611491 394 ntBASIC3.32□□□□□ -1.88
RPS4XP62701 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.32□□□□□ -1.88
RPS4XP62701 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.32□□□□□ -1.88
RPS4XP62701 AC099786.3-201ENST00000565735 1410 ntBASIC3.32□□□□□ -1.88
RPS4XP62701 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
RPS4XP62701 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RPS4XP62701 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
RPS4XP62701 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
RPS4XP62701 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RPS4XP62701 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.31□□□□□ -1.88
RPS4XP62701 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RPS4XP62701 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RPS4XP62701 RNA5SP258-201ENST00000362750 119 ntBASIC3.31□□□□□ -1.88
RPS4XP62701 RNA5SP42-201ENST00000364278 115 ntBASIC3.31□□□□□ -1.88
RPS4XP62701 SNORA72.3-201ENST00000365074 132 ntBASIC3.31□□□□□ -1.88
RPS4XP62701 SNORD116.1-201ENST00000365628 92 ntBASIC3.31□□□□□ -1.88
RPS4XP62701 MIR607-201ENST00000385241 96 ntBASIC3.31□□□□□ -1.88
RPS4XP62701 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RPS4XP62701 RPS29P4-201ENST00000414733 161 ntBASIC3.31□□□□□ -1.88
RPS4XP62701 RPL21P112-201ENST00000434403 463 ntBASIC3.31□□□□□ -1.88
RPS4XP62701 AC092427.1-201ENST00000439177 601 ntBASIC3.31□□□□□ -1.88
RPS4XP62701 ELOCP13-201ENST00000443934 329 ntBASIC3.31□□□□□ -1.88
RPS4XP62701 PRSS3P4-201ENST00000453323 162 ntBASIC3.31□□□□□ -1.88
RPS4XP62701 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RPS4XP62701 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.31□□□□□ -1.88
RPS4XP62701 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RPS4XP62701 UBE2CP3-201ENST00000502715 450 ntBASIC3.31□□□□□ -1.88
RPS4XP62701 HMGB1P28-201ENST00000507778 552 ntBASIC3.31□□□□□ -1.88
RPS4XP62701 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.31□□□□□ -1.88
RPS4XP62701 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.31□□□□□ -1.88
RPS4XP62701 MTND2P32-201ENST00000521584 1038 ntBASIC3.31□□□□□ -1.88
RPS4XP62701 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.31□□□□□ -1.88
RPS4XP62701 IGKV2D-19-201ENST00000523346 262 ntBASIC3.31□□□□□ -1.88
RPS4XP62701 AP004371.1-201ENST00000525240 214 ntBASIC3.31□□□□□ -1.88
RPS4XP62701 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.31□□□□□ -1.88
RPS4XP62701 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.31□□□□□ -1.88
RPS4XP62701 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.31□□□□□ -1.88
RPS4XP62701 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.31□□□□□ -1.88
RPS4XP62701 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.31□□□□□ -1.88
RPS4XP62701 AC008011.1-201ENST00000545989 227 ntBASIC3.31□□□□□ -1.88
RPS4XP62701 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.31□□□□□ -1.88
RPS4XP62701 AL121766.1-201ENST00000547436 487 ntBASIC3.31□□□□□ -1.88
RPS4XP62701 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.31□□□□□ -1.88
RPS4XP62701 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.31□□□□□ -1.88
RPS4XP62701 MIR4738-201ENST00000579134 87 ntBASIC3.31□□□□□ -1.88
RPS4XP62701 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.31□□□□□ -1.88
RPS4XP62701 MIR5187-201ENST00000583479 76 ntBASIC3.31□□□□□ -1.88
RPS4XP62701 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.31□□□□□ -1.88
RPS4XP62701 AC110741.2-201ENST00000605278 268 ntBASIC3.31□□□□□ -1.88
RPS4XP62701 AC027449.1-201ENST00000608890 407 ntBASIC3.31□□□□□ -1.88
RPS4XP62701 AC107075.1-201ENST00000613695 314 ntBASIC3.31□□□□□ -1.88
RPS4XP62701 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RPS4XP62701 AL732618.1-201ENST00000623251 301 ntBASIC3.31□□□□□ -1.88
RPS4XP62701 AL078595.3-201ENST00000623815 1166 ntBASIC3.31□□□□□ -1.88
RPS4XP62701 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.31□□□□□ -1.88
RPS4XP62701 MIR1322-201ENST00000638013 71 ntBASIC3.31□□□□□ -1.88
RPS4XP62701 AL732372.2-225ENST00000642124 456 ntBASIC3.31□□□□□ -1.88
RPS4XP62701 USP8P1-201ENST00000494673 3183 ntBASIC3.31□□□□□ -1.88
RPS4XP62701 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RPS4XP62701 AC008725.1-201ENST00000605123 2263 ntBASIC3.31□□□□□ -1.88
RPS4XP62701 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.3□□□□□ -1.88
RPS4XP62701 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.3□□□□□ -1.88
RPS4XP62701 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.3□□□□□ -1.88
RPS4XP62701 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.3□□□□□ -1.88
RPS4XP62701 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RPS4XP62701 AC095050.2-201ENST00000510748 1458 ntBASIC3.3□□□□□ -1.88
RPS4XP62701 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RPS4XP62701 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RPS4XP62701 RNU6-1249P-201ENST00000363237 111 ntBASIC3.3□□□□□ -1.88
RPS4XP62701 U8.11-201ENST00000384699 133 ntBASIC3.3□□□□□ -1.88
RPS4XP62701 U8.12-201ENST00000384701 133 ntBASIC3.3□□□□□ -1.88
RPS4XP62701 SNRPEP2-201ENST00000397592 279 ntBASIC3.3□□□□□ -1.88
RPS4XP62701 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
RPS4XP62701 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.3□□□□□ -1.88
RPS4XP62701 RPL30P2-201ENST00000414021 291 ntBASIC3.3□□□□□ -1.88
RPS4XP62701 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.3□□□□□ -1.88
RPS4XP62701 TOMM22P1-201ENST00000418578 312 ntBASIC3.3□□□□□ -1.88
RPS4XP62701 AIMP1P1-201ENST00000418670 937 ntBASIC3.3□□□□□ -1.88
RPS4XP62701 AL035423.1-201ENST00000420331 213 ntBASIC3.3□□□□□ -1.88
RPS4XP62701 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.3□□□□□ -1.88
RPS4XP62701 RPL23AP74-201ENST00000437246 471 ntBASIC3.3□□□□□ -1.88
RPS4XP62701 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RPS4XP62701 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RPS4XP62701 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.3□□□□□ -1.88
RPS4XP62701 AL445669.2-201ENST00000454425 421 ntBASIC3.3□□□□□ -1.88
RPS4XP62701 snoU109.4-201ENST00000458953 143 ntBASIC3.3□□□□□ -1.88
RPS4XP62701 U8.18-201ENST00000459285 133 ntBASIC3.3□□□□□ -1.88
RPS4XP62701 AL133162.1-201ENST00000463228 453 ntBASIC3.3□□□□□ -1.88
RPS4XP62701 RPS15AP17-201ENST00000470598 390 ntBASIC3.3□□□□□ -1.88
RPS4XP62701 AC106872.2-201ENST00000494303 480 ntBASIC3.3□□□□□ -1.88
RPS4XP62701 HMGB1P22-201ENST00000505315 124 ntBASIC3.3□□□□□ -1.88
RPS4XP62701 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.3□□□□□ -1.88
RPS4XP62701 RNU6-415P-201ENST00000516252 97 ntBASIC3.3□□□□□ -1.88
RPS4XP62701 RNU6-579P-201ENST00000516879 102 ntBASIC3.3□□□□□ -1.88
RPS4XP62701 AC104986.1-201ENST00000517978 436 ntBASIC3.3□□□□□ -1.88
RPS4XP62701 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.3□□□□□ -1.88
RPS4XP62701 OR5AP1P-201ENST00000529730 940 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms