Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RNU11-4P-201ENST00000391149 133 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.74□□□□□ -1.81
CLDN20P56880 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLDN20P56880 AL031679.1-201ENST00000400616 525 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 MTND4LP20-201ENST00000402379 270 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.74□□□□□ -1.81
CLDN20P56880 RPL31P45-201ENST00000419532 356 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 GLRXP1-201ENST00000423261 334 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 BX119904.4-201ENST00000424402 301 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.74□□□□□ -1.81
CLDN20P56880 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLDN20P56880 AL512649.1-201ENST00000428997 581 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 OR4C10P-201ENST00000434991 931 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 MUPP-201ENST00000438111 566 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 AL022578.1-201ENST00000439330 1433 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 AL831737.1-201ENST00000441288 271 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 MTND5P14-201ENST00000441481 1267 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 HSPE1P28-201ENST00000443139 211 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 RPL21P133-201ENST00000443666 476 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 MTND1P29-201ENST00000448112 647 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 KATNBL1P6-201ENST00000453433 915 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 RPL30P9-201ENST00000465586 330 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.74□□□□□ -1.81
CLDN20P56880 RPS4XP15-201ENST00000489210 795 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 AL024509.2-201ENST00000493462 493 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 AC080014.1-201ENST00000496877 1201 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 NUP58P1-201ENST00000502546 1738 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CLDN20P56880 AC093824.1-201ENST00000508796 343 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 MTCO3P44-201ENST00000510977 541 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.74□□□□□ -1.81
CLDN20P56880 MTND5P13-201ENST00000513046 1079 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 MTCO1P24-201ENST00000515438 1558 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 IGKV2D-36-201ENST00000518643 226 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.74□□□□□ -1.81
CLDN20P56880 COX6CP8-201ENST00000522620 226 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 HIGD1AP10-201ENST00000527837 282 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 AC068587.4-201ENST00000533893 186 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.74□□□□□ -1.81
CLDN20P56880 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.74□□□□□ -1.81
CLDN20P56880 PCMTD1P2-201ENST00000565017 355 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 AC008507.1-201ENST00000587506 734 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLDN20P56880 AL022161.1-201ENST00000604390 213 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.74□□□□□ -1.81
CLDN20P56880 AC110741.2-201ENST00000605278 268 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 AC107214.2-201ENST00000608204 634 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 OR6R2P-201ENST00000609216 300 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 AC064801.1-201ENST00000612025 407 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 AC073114.1-201ENST00000612027 490 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 ZYXP1-201ENST00000617638 118 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 AC068831.8-201ENST00000620171 435 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 AL445264.1-201ENST00000621719 171 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 AC004009.2-201ENST00000623016 728 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 AC068724.3-201ENST00000625906 87 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 AC068137.4-201ENST00000638485 296 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 HSPA8P1-201ENST00000425843 1833 ntBASIC3.74□□□□□ -1.81
CLDN20P56880 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.74□□□□□ -1.81
CLDN20P56880 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.74□□□□□ -1.81
CLDN20P56880 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
CLDN20P56880 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
CLDN20P56880 AC097714.1-201ENST00000511272 1647 ntBASIC3.73□□□□□ -1.81
CLDN20P56880 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLDN20P56880 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLDN20P56880 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CLDN20P56880 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.73□□□□□ -1.81
CLDN20P56880 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLDN20P56880 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CLDN20P56880 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CLDN20P56880 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.73□□□□□ -1.81
CLDN20P56880 RNU6-339P-201ENST00000384310 107 ntBASIC3.73□□□□□ -1.81
CLDN20P56880 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
CLDN20P56880 Z98941.1-201ENST00000407764 100 ntBASIC3.73□□□□□ -1.81
CLDN20P56880 RHEBP3-201ENST00000411920 351 ntBASIC3.73□□□□□ -1.81
CLDN20P56880 HMGB1P11-201ENST00000413899 637 ntBASIC3.73□□□□□ -1.81
CLDN20P56880 AC108032.1-201ENST00000416706 207 ntBASIC3.73□□□□□ -1.81
CLDN20P56880 MTCO2P5-201ENST00000422621 426 ntBASIC3.73□□□□□ -1.81
CLDN20P56880 AC005517.2-201ENST00000424673 553 ntBASIC3.73□□□□□ -1.81
CLDN20P56880 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.73□□□□□ -1.81
CLDN20P56880 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.73□□□□□ -1.81
CLDN20P56880 AL512286.1-201ENST00000439244 400 ntBASIC3.73□□□□□ -1.81
CLDN20P56880 AC006011.1-201ENST00000442758 349 ntBASIC3.73□□□□□ -1.81
CLDN20P56880 MTCO1P27-201ENST00000448269 226 ntBASIC3.73□□□□□ -1.81
CLDN20P56880 PAXBP1P1-201ENST00000449315 447 ntBASIC3.73□□□□□ -1.81
CLDN20P56880 RPL36AP33-201ENST00000450395 310 ntBASIC3.73□□□□□ -1.81
CLDN20P56880 AC005297.2-201ENST00000450430 606 ntBASIC3.73□□□□□ -1.81
CLDN20P56880 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.73□□□□□ -1.81
CLDN20P56880 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.73□□□□□ -1.81
CLDN20P56880 SUMO2P2-201ENST00000456482 255 ntBASIC3.73□□□□□ -1.81
CLDN20P56880 AC146507.1-201ENST00000468335 354 ntBASIC3.73□□□□□ -1.81
CLDN20P56880 RN7SL604P-201ENST00000492589 296 ntBASIC3.73□□□□□ -1.81
CLDN20P56880 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.73□□□□□ -1.81
CLDN20P56880 PRELID3BP7-201ENST00000503606 469 ntBASIC3.73□□□□□ -1.81
CLDN20P56880 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.73□□□□□ -1.81
CLDN20P56880 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.73□□□□□ -1.81
CLDN20P56880 TMEM248P1-201ENST00000510579 951 ntBASIC3.73□□□□□ -1.81
CLDN20P56880 AC024589.1-201ENST00000512207 263 ntBASIC3.73□□□□□ -1.81
CLDN20P56880 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.73□□□□□ -1.81
CLDN20P56880 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.73□□□□□ -1.81
CLDN20P56880 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms