Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AP001486.3-201ENST00000615334 372 ntBASIC4.8□□□□□ -1.64
GFRA1P56159 SNHG22-203ENST00000617833 660 ntBASIC4.8□□□□□ -1.64
GFRA1P56159 MIR6719-201ENST00000622428 87 ntBASIC4.8□□□□□ -1.64
GFRA1P56159 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
GFRA1P56159 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.8□□□□□ -1.64
GFRA1P56159 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.8□□□□□ -1.64
GFRA1P56159 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
GFRA1P56159 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.8□□□□□ -1.64
GFRA1P56159 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
GFRA1P56159 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
GFRA1P56159 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
GFRA1P56159 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
GFRA1P56159 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
GFRA1P56159 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GFRA1P56159 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
GFRA1P56159 AC109780.1-201ENST00000451768 1344 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
GFRA1P56159 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GFRA1P56159 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
GFRA1P56159 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.79□□□□□ -1.64
GFRA1P56159 AL034549.2-201ENST00000618285 3373 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.79□□□□□ -1.64
GFRA1P56159 RNU6-188P-201ENST00000364207 107 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 RNU1-43P-201ENST00000365052 165 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 Y_RNA.373-201ENST00000365600 103 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.79□□□□□ -1.64
GFRA1P56159 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GFRA1P56159 Y_RNA.384-201ENST00000383909 102 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 MIR153-1-201ENST00000384914 90 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 MIR105-2-201ENST00000385083 81 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 AC013442.1-201ENST00000397347 228 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 DUTP5-201ENST00000406790 469 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.79□□□□□ -1.64
GFRA1P56159 AL451054.2-201ENST00000420896 202 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.79□□□□□ -1.64
GFRA1P56159 CKS1BP5-201ENST00000434172 273 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 HMGB1P18-201ENST00000438801 619 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.79□□□□□ -1.64
GFRA1P56159 AL118520.1-201ENST00000450770 291 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 CEACAMP6-201ENST00000452007 574 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 AL389915.2-201ENST00000454576 441 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 AC079168.1-201ENST00000458741 345 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 AC008481.1-201ENST00000463278 396 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 RN7SL197P-201ENST00000466981 299 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 RN7SL432P-201ENST00000484057 298 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 AC008953.1-201ENST00000497334 318 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.79□□□□□ -1.64
GFRA1P56159 AC027308.1-201ENST00000517993 110 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 RPL7P20-201ENST00000520308 745 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 HPRT1P3-201ENST00000539521 576 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.79□□□□□ -1.64
GFRA1P56159 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.79□□□□□ -1.64
GFRA1P56159 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.79□□□□□ -1.64
GFRA1P56159 AL670379.6-201ENST00000603753 252 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 AL670379.11-201ENST00000604059 253 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 AC008162.1-201ENST00000604718 254 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 AL670379.1-201ENST00000604752 252 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 AL670379.5-201ENST00000605253 252 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 AL670379.12-201ENST00000605291 253 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 AL670379.8-201ENST00000605353 252 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 AL670379.7-201ENST00000605823 252 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 AL022345.1-201ENST00000607292 135 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.79□□□□□ -1.64
GFRA1P56159 uc_338.34-201ENST00000617467 174 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 MIR6130-201ENST00000619419 109 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 AC018445.2-201ENST00000622987 260 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 AC011155.2-201ENST00000623202 216 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 AC055839.1-201ENST00000634467 498 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
GFRA1P56159 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.79□□□□□ -1.64
GFRA1P56159 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.79□□□□□ -1.64
GFRA1P56159 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.79□□□□□ -1.64
GFRA1P56159 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
GFRA1P56159 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
GFRA1P56159 ADAM24P-201ENST00000398655 2101 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GFRA1P56159 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GFRA1P56159 AC116667.1-201ENST00000604855 2072 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 AL360270.2-201ENST00000562952 5985 ntBASIC4.79□□□□□ -1.64
GFRA1P56159 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.79□□□□□ -1.64
GFRA1P56159 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
GFRA1P56159 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
GFRA1P56159 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
GFRA1P56159 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
GFRA1P56159 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
GFRA1P56159 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
GFRA1P56159 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
GFRA1P56159 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.78□□□□□ -1.64
GFRA1P56159 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
GFRA1P56159 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GFRA1P56159 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.78□□□□□ -1.64
GFRA1P56159 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
GFRA1P56159 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
GFRA1P56159 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GFRA1P56159 SNORA17.1-201ENST00000362945 126 ntBASIC4.78□□□□□ -1.64
GFRA1P56159 Y_RNA.184-201ENST00000363884 108 ntBASIC4.78□□□□□ -1.64
GFRA1P56159 SNORA24.1-201ENST00000384401 135 ntBASIC4.78□□□□□ -1.64
GFRA1P56159 MIR105-1-201ENST00000385222 81 ntBASIC4.78□□□□□ -1.64
GFRA1P56159 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GFRA1P56159 SPTLC1P2-201ENST00000407089 121 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms