Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.16□□□□□ -1.9
PKNOX1P55347 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.16□□□□□ -1.9
PKNOX1P55347 AC130650.2-201ENST00000618736 2403 ntBASIC3.16□□□□□ -1.9
PKNOX1P55347 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.16□□□□□ -1.9
PKNOX1P55347 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PKNOX1P55347 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.16□□□□□ -1.9
PKNOX1P55347 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
PKNOX1P55347 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PKNOX1P55347 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.16□□□□□ -1.9
PKNOX1P55347 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.16□□□□□ -1.9
PKNOX1P55347 MTND5P24-201ENST00000438892 1767 ntBASIC3.15□□□□□ -1.9
PKNOX1P55347 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PKNOX1P55347 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
PKNOX1P55347 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
PKNOX1P55347 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PKNOX1P55347 RNU6-989P-201ENST00000362756 107 ntBASIC3.15□□□□□ -1.91
PKNOX1P55347 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.91
PKNOX1P55347 MIR217-201ENST00000384817 110 ntBASIC3.15□□□□□ -1.91
PKNOX1P55347 MT-TC-201ENST00000387405 66 ntBASIC3.15□□□□□ -1.91
PKNOX1P55347 FNDC3CP-201ENST00000420795 1155 ntBASIC3.15□□□□□ -1.91
PKNOX1P55347 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.15□□□□□ -1.91
PKNOX1P55347 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.15□□□□□ -1.91
PKNOX1P55347 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.15□□□□□ -1.91
PKNOX1P55347 AC018644.1-201ENST00000429934 551 ntBASIC3.15□□□□□ -1.91
PKNOX1P55347 VDAC1P3-201ENST00000434069 851 ntBASIC3.15□□□□□ -1.91
PKNOX1P55347 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.15□□□□□ -1.91
PKNOX1P55347 COX6CP18-201ENST00000448769 222 ntBASIC3.15□□□□□ -1.91
PKNOX1P55347 HMGN2P16-201ENST00000456802 261 ntBASIC3.15□□□□□ -1.91
PKNOX1P55347 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.15□□□□□ -1.91
PKNOX1P55347 AC104629.1-201ENST00000494226 508 ntBASIC3.15□□□□□ -1.91
PKNOX1P55347 RPL23AP55-201ENST00000498163 452 ntBASIC3.15□□□□□ -1.91
PKNOX1P55347 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.15□□□□□ -1.91
PKNOX1P55347 AC016550.1-201ENST00000505348 785 ntBASIC3.15□□□□□ -1.91
PKNOX1P55347 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.15□□□□□ -1.91
PKNOX1P55347 MTND4LP22-201ENST00000508209 276 ntBASIC3.15□□□□□ -1.91
PKNOX1P55347 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
PKNOX1P55347 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.15□□□□□ -1.91
PKNOX1P55347 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PKNOX1P55347 RNA5SP380-201ENST00000517190 98 ntBASIC3.15□□□□□ -1.91
PKNOX1P55347 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.15□□□□□ -1.91
PKNOX1P55347 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.15□□□□□ -1.91
PKNOX1P55347 AC068339.2-201ENST00000534395 618 ntBASIC3.15□□□□□ -1.91
PKNOX1P55347 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.15□□□□□ -1.91
PKNOX1P55347 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.15□□□□□ -1.91
PKNOX1P55347 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
PKNOX1P55347 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.15□□□□□ -1.91
PKNOX1P55347 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.15□□□□□ -1.91
PKNOX1P55347 MIR5186-201ENST00000577504 120 ntBASIC3.15□□□□□ -1.91
PKNOX1P55347 MIR4276-201ENST00000584832 70 ntBASIC3.15□□□□□ -1.91
PKNOX1P55347 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PKNOX1P55347 AC093227.2-201ENST00000589357 285 ntBASIC3.15□□□□□ -1.91
PKNOX1P55347 AC073657.2-201ENST00000605661 303 ntBASIC3.15□□□□□ -1.91
PKNOX1P55347 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.15□□□□□ -1.91
PKNOX1P55347 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.15□□□□□ -1.91
PKNOX1P55347 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PKNOX1P55347 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.15□□□□□ -1.91
PKNOX1P55347 Z83843.1-201ENST00000604070 3685 ntBASIC3.15□□□□□ -1.91
PKNOX1P55347 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PKNOX1P55347 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PKNOX1P55347 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.14□□□□□ -1.91
PKNOX1P55347 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.14□□□□□ -1.91
PKNOX1P55347 MAPK10-362ENST00000641864 4484 ntBASIC3.14□□□□□ -1.91
PKNOX1P55347 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.14□□□□□ -1.91
PKNOX1P55347 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
PKNOX1P55347 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PKNOX1P55347 RNU6-251P-201ENST00000363235 104 ntBASIC3.14□□□□□ -1.91
PKNOX1P55347 RNA5SP479-201ENST00000364858 117 ntBASIC3.14□□□□□ -1.91
PKNOX1P55347 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PKNOX1P55347 RNU6-730P-201ENST00000383954 104 ntBASIC3.14□□□□□ -1.91
PKNOX1P55347 RNU6-1181P-201ENST00000384191 106 ntBASIC3.14□□□□□ -1.91
PKNOX1P55347 RPL31P1-201ENST00000398116 372 ntBASIC3.14□□□□□ -1.91
PKNOX1P55347 AL136133.1-201ENST00000413694 376 ntBASIC3.14□□□□□ -1.91
PKNOX1P55347 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.14□□□□□ -1.91
PKNOX1P55347 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.14□□□□□ -1.91
PKNOX1P55347 DPPA2P1-201ENST00000428060 556 ntBASIC3.14□□□□□ -1.91
PKNOX1P55347 AC009969.1-201ENST00000438726 172 ntBASIC3.14□□□□□ -1.91
PKNOX1P55347 AL662791.1-201ENST00000441992 928 ntBASIC3.14□□□□□ -1.91
PKNOX1P55347 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.14□□□□□ -1.91
PKNOX1P55347 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.14□□□□□ -1.91
PKNOX1P55347 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.14□□□□□ -1.91
PKNOX1P55347 RPL7P38-201ENST00000488396 739 ntBASIC3.14□□□□□ -1.91
PKNOX1P55347 RN7SL283P-201ENST00000489055 303 ntBASIC3.14□□□□□ -1.91
PKNOX1P55347 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.14□□□□□ -1.91
PKNOX1P55347 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.14□□□□□ -1.91
PKNOX1P55347 HMGB1P22-201ENST00000505315 124 ntBASIC3.14□□□□□ -1.91
PKNOX1P55347 HMGB3P15-201ENST00000507326 574 ntBASIC3.14□□□□□ -1.91
PKNOX1P55347 snoZ278.1-201ENST00000517059 112 ntBASIC3.14□□□□□ -1.91
PKNOX1P55347 AC023632.1-201ENST00000518463 375 ntBASIC3.14□□□□□ -1.91
PKNOX1P55347 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.14□□□□□ -1.91
PKNOX1P55347 OR8I1P-201ENST00000529291 931 ntBASIC3.14□□□□□ -1.91
PKNOX1P55347 AC087894.1-201ENST00000538359 518 ntBASIC3.14□□□□□ -1.91
PKNOX1P55347 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.14□□□□□ -1.91
PKNOX1P55347 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.14□□□□□ -1.91
PKNOX1P55347 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.14□□□□□ -1.91
PKNOX1P55347 AC106785.1-201ENST00000565935 262 ntBASIC3.14□□□□□ -1.91
PKNOX1P55347 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.14□□□□□ -1.91
PKNOX1P55347 AC122134.1-202ENST00000569111 1201 ntBASIC3.14□□□□□ -1.91
PKNOX1P55347 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.14□□□□□ -1.91
PKNOX1P55347 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.14□□□□□ -1.91
PKNOX1P55347 AL513477.2-201ENST00000607858 568 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms