Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.3□□□□□ -1.88
CLTCL1P53675 AC103798.2-201ENST00000624292 632 ntBASIC3.3□□□□□ -1.88
CLTCL1P53675 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLTCL1P53675 HSPA8P4-201ENST00000511877 1920 ntBASIC3.3□□□□□ -1.88
CLTCL1P53675 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.3□□□□□ -1.88
CLTCL1P53675 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLTCL1P53675 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLTCL1P53675 AL023284.1-201ENST00000403956 276 ntBASIC3.3□□□□□ -1.88
CLTCL1P53675 MTATP6P11-201ENST00000428071 670 ntBASIC3.3□□□□□ -1.88
CLTCL1P53675 MTND4P2-201ENST00000507767 1203 ntBASIC3.3□□□□□ -1.88
CLTCL1P53675 XKRY-201ENST00000510392 1100 ntBASIC3.3□□□□□ -1.88
CLTCL1P53675 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.3□□□□□ -1.88
CLTCL1P53675 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.3□□□□□ -1.88
CLTCL1P53675 TPMTP1-201ENST00000592307 737 ntBASIC3.3□□□□□ -1.88
CLTCL1P53675 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.3□□□□□ -1.88
CLTCL1P53675 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLTCL1P53675 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLTCL1P53675 ZNF72P-201ENST00000425869 1908 ntBASIC3.29□□□□□ -1.88
CLTCL1P53675 SNORA64-201ENST00000384674 134 ntBASIC3.29□□□□□ -1.88
CLTCL1P53675 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.29□□□□□ -1.88
CLTCL1P53675 PTP4A1P7-201ENST00000423476 514 ntBASIC3.29□□□□□ -1.88
CLTCL1P53675 RPS15AP28-201ENST00000435088 386 ntBASIC3.29□□□□□ -1.88
CLTCL1P53675 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
CLTCL1P53675 AC023043.3-201ENST00000593113 385 ntBASIC3.29□□□□□ -1.88
CLTCL1P53675 AC092447.7-201ENST00000422212 1621 ntBASIC3.29□□□□□ -1.88
CLTCL1P53675 PHKBP1-201ENST00000450951 1951 ntBASIC3.29□□□□□ -1.88
CLTCL1P53675 MTCO1P9-201ENST00000505577 1534 ntBASIC3.29□□□□□ -1.88
CLTCL1P53675 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.28□□□□□ -1.88
CLTCL1P53675 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.28□□□□□ -1.88
CLTCL1P53675 AC107081.1-201ENST00000414975 361 ntBASIC3.28□□□□□ -1.88
CLTCL1P53675 RPS24P8-201ENST00000431490 402 ntBASIC3.28□□□□□ -1.88
CLTCL1P53675 RPL7P12-201ENST00000446719 750 ntBASIC3.28□□□□□ -1.88
CLTCL1P53675 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.28□□□□□ -1.88
CLTCL1P53675 SUMO2P4-201ENST00000504193 276 ntBASIC3.28□□□□□ -1.88
CLTCL1P53675 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CLTCL1P53675 AP003467.2-201ENST00000520175 319 ntBASIC3.28□□□□□ -1.88
CLTCL1P53675 AC019227.1-201ENST00000526902 510 ntBASIC3.28□□□□□ -1.88
CLTCL1P53675 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.28□□□□□ -1.88
CLTCL1P53675 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.28□□□□□ -1.88
CLTCL1P53675 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.28□□□□□ -1.88
CLTCL1P53675 AL645944.1-201ENST00000603857 493 ntBASIC3.28□□□□□ -1.88
CLTCL1P53675 CR589904.2-201ENST00000612533 440 ntBASIC3.28□□□□□ -1.88
CLTCL1P53675 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLTCL1P53675 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.27□□□□□ -1.89
CLTCL1P53675 RNU6-76P-201ENST00000384060 104 ntBASIC3.27□□□□□ -1.89
CLTCL1P53675 MIR142-201ENST00000384835 87 ntBASIC3.27□□□□□ -1.89
CLTCL1P53675 RPS3AP26-201ENST00000398259 784 ntBASIC3.27□□□□□ -1.89
CLTCL1P53675 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.27□□□□□ -1.89
CLTCL1P53675 Z98742.2-201ENST00000431564 187 ntBASIC3.27□□□□□ -1.89
CLTCL1P53675 AC010881.1-201ENST00000433830 235 ntBASIC3.27□□□□□ -1.89
CLTCL1P53675 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.27□□□□□ -1.89
CLTCL1P53675 MIR6873-201ENST00000622788 63 ntBASIC3.27□□□□□ -1.89
CLTCL1P53675 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CLTCL1P53675 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLTCL1P53675 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.27□□□□□ -1.89
CLTCL1P53675 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CLTCL1P53675 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.26□□□□□ -1.89
CLTCL1P53675 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC3.26□□□□□ -1.89
CLTCL1P53675 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.26□□□□□ -1.89
CLTCL1P53675 MTCO3P11-201ENST00000455103 774 ntBASIC3.26□□□□□ -1.89
CLTCL1P53675 RPL23AP62-201ENST00000463396 453 ntBASIC3.26□□□□□ -1.89
CLTCL1P53675 AC104090.1-201ENST00000506341 1171 ntBASIC3.26□□□□□ -1.89
CLTCL1P53675 RNA5SP458-201ENST00000516188 119 ntBASIC3.26□□□□□ -1.89
CLTCL1P53675 HMGB1P41-201ENST00000520234 440 ntBASIC3.26□□□□□ -1.89
CLTCL1P53675 AC026464.5-201ENST00000562497 722 ntBASIC3.26□□□□□ -1.89
CLTCL1P53675 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.26□□□□□ -1.89
CLTCL1P53675 AC009318.2-201ENST00000610917 651 ntBASIC3.26□□□□□ -1.89
CLTCL1P53675 AL136981.2-201ENST00000617319 734 ntBASIC3.26□□□□□ -1.89
CLTCL1P53675 AC026634.1-201ENST00000634369 198 ntBASIC3.26□□□□□ -1.89
CLTCL1P53675 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CLTCL1P53675 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CLTCL1P53675 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CLTCL1P53675 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CLTCL1P53675 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CLTCL1P53675 MIR21-201ENST00000362134 72 ntBASIC3.26□□□□□ -1.89
CLTCL1P53675 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.26□□□□□ -1.89
CLTCL1P53675 AL139156.1-201ENST00000412785 841 ntBASIC3.26□□□□□ -1.89
CLTCL1P53675 AL354710.1-201ENST00000453641 246 ntBASIC3.26□□□□□ -1.89
CLTCL1P53675 RPL21P99-201ENST00000480369 423 ntBASIC3.26□□□□□ -1.89
CLTCL1P53675 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
CLTCL1P53675 AC110994.2-201ENST00000635481 492 ntBASIC3.26□□□□□ -1.89
CLTCL1P53675 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.25□□□□□ -1.89
CLTCL1P53675 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.25□□□□□ -1.89
CLTCL1P53675 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.25□□□□□ -1.89
CLTCL1P53675 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.25□□□□□ -1.89
CLTCL1P53675 ISCA1P6-201ENST00000427740 390 ntBASIC3.25□□□□□ -1.89
CLTCL1P53675 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.25□□□□□ -1.89
CLTCL1P53675 AC068587.2-201ENST00000478386 781 ntBASIC3.25□□□□□ -1.89
CLTCL1P53675 RANP3-201ENST00000530970 276 ntBASIC3.25□□□□□ -1.89
CLTCL1P53675 PISRT1-201ENST00000626175 531 ntBASIC3.25□□□□□ -1.89
CLTCL1P53675 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.25□□□□□ -1.89
CLTCL1P53675 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.25□□□□□ -1.89
CLTCL1P53675 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLTCL1P53675 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLTCL1P53675 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.25□□□□□ -1.89
CLTCL1P53675 RNU6-253P-201ENST00000384730 105 ntBASIC3.24□□□□□ -1.89
CLTCL1P53675 GSTA9P-201ENST00000406231 611 ntBASIC3.24□□□□□ -1.89
CLTCL1P53675 RN7SKP32-201ENST00000410167 303 ntBASIC3.24□□□□□ -1.89
CLTCL1P53675 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.24□□□□□ -1.89
CLTCL1P53675 YWHAZP7-201ENST00000436906 631 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms