Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
NEK3P51956 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
NEK3P51956 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NEK3P51956 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NEK3P51956 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
NEK3P51956 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NEK3P51956 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
NEK3P51956 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NEK3P51956 AC139769.1-204ENST00000472297 1931 ntBASIC4.5□□□□□ -1.69
NEK3P51956 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NEK3P51956 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NEK3P51956 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
NEK3P51956 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
NEK3P51956 RNU11-4P-201ENST00000391149 133 ntBASIC4.5□□□□□ -1.69
NEK3P51956 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
NEK3P51956 AC109780.2-201ENST00000413467 845 ntBASIC4.5□□□□□ -1.69
NEK3P51956 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.5□□□□□ -1.69
NEK3P51956 RPL36AP36-201ENST00000418616 301 ntBASIC4.5□□□□□ -1.69
NEK3P51956 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.5□□□□□ -1.69
NEK3P51956 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.5□□□□□ -1.69
NEK3P51956 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.5□□□□□ -1.69
NEK3P51956 AC096638.2-201ENST00000434965 711 ntBASIC4.5□□□□□ -1.69
NEK3P51956 MTND2P22-201ENST00000444325 1033 ntBASIC4.5□□□□□ -1.69
NEK3P51956 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.5□□□□□ -1.69
NEK3P51956 AC009961.3-201ENST00000449832 765 ntBASIC4.5□□□□□ -1.69
NEK3P51956 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.5□□□□□ -1.69
NEK3P51956 AC012671.1-201ENST00000451912 203 ntBASIC4.5□□□□□ -1.69
NEK3P51956 SNRPFP4-201ENST00000456366 242 ntBASIC4.5□□□□□ -1.69
NEK3P51956 AC092754.2-201ENST00000463506 460 ntBASIC4.5□□□□□ -1.69
NEK3P51956 RPL23AP2-201ENST00000471227 466 ntBASIC4.5□□□□□ -1.69
NEK3P51956 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.5□□□□□ -1.69
NEK3P51956 AC021146.1-201ENST00000511202 716 ntBASIC4.5□□□□□ -1.69
NEK3P51956 AC108043.1-201ENST00000512696 574 ntBASIC4.5□□□□□ -1.69
NEK3P51956 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NEK3P51956 AC022483.1-201ENST00000514020 567 ntBASIC4.5□□□□□ -1.69
NEK3P51956 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.5□□□□□ -1.69
NEK3P51956 RNU2-58P-201ENST00000516403 183 ntBASIC4.5□□□□□ -1.69
NEK3P51956 RNU6-1073P-201ENST00000517182 106 ntBASIC4.5□□□□□ -1.69
NEK3P51956 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.5□□□□□ -1.69
NEK3P51956 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.5□□□□□ -1.69
NEK3P51956 RPL23AP97-201ENST00000568955 471 ntBASIC4.5□□□□□ -1.69
NEK3P51956 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.5□□□□□ -1.69
NEK3P51956 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.5□□□□□ -1.69
NEK3P51956 AC083760.1-201ENST00000589621 670 ntBASIC4.5□□□□□ -1.69
NEK3P51956 TPMTP1-201ENST00000592307 737 ntBASIC4.5□□□□□ -1.69
NEK3P51956 BPIFA4P-203ENST00000603168 689 ntBASIC4.5□□□□□ -1.69
NEK3P51956 AL451086.1-201ENST00000605596 223 ntBASIC4.5□□□□□ -1.69
NEK3P51956 AL031666.3-201ENST00000609320 1006 ntBASIC4.5□□□□□ -1.69
NEK3P51956 MLECP1-201ENST00000615893 709 ntBASIC4.5□□□□□ -1.69
NEK3P51956 AC009268.2-201ENST00000621925 457 ntBASIC4.5□□□□□ -1.69
NEK3P51956 AC073530.2-201ENST00000623987 261 ntBASIC4.5□□□□□ -1.69
NEK3P51956 MIR4275-201ENST00000636486 87 ntBASIC4.5□□□□□ -1.69
NEK3P51956 AC011460.1-201ENST00000636268 1834 ntBASIC4.5□□□□□ -1.69
NEK3P51956 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.5□□□□□ -1.69
NEK3P51956 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.5□□□□□ -1.69
NEK3P51956 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NEK3P51956 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.5□□□□□ -1.69
NEK3P51956 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
NEK3P51956 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
NEK3P51956 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.5□□□□□ -1.69
NEK3P51956 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.49□□□□□ -1.69
NEK3P51956 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.49□□□□□ -1.69
NEK3P51956 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NEK3P51956 RNU1-15P-201ENST00000353977 144 ntBASIC4.49□□□□□ -1.69
NEK3P51956 RNA5SP307-201ENST00000362863 116 ntBASIC4.49□□□□□ -1.69
NEK3P51956 SNORA70.2-201ENST00000364506 135 ntBASIC4.49□□□□□ -1.69
NEK3P51956 MT-TH-201ENST00000387441 69 ntBASIC4.49□□□□□ -1.69
NEK3P51956 SKINT1L-201ENST00000401057 817 ntBASIC4.49□□□□□ -1.69
NEK3P51956 SNORA74C-2-201ENST00000411179 201 ntBASIC4.49□□□□□ -1.69
NEK3P51956 AL359704.1-201ENST00000411586 781 ntBASIC4.49□□□□□ -1.69
NEK3P51956 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.49□□□□□ -1.69
NEK3P51956 RPL17P12-201ENST00000413391 526 ntBASIC4.49□□□□□ -1.69
NEK3P51956 AC004552.1-201ENST00000419089 348 ntBASIC4.49□□□□□ -1.69
NEK3P51956 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.49□□□□□ -1.69
NEK3P51956 RPL21P66-201ENST00000426566 466 ntBASIC4.49□□□□□ -1.69
NEK3P51956 AC244035.1-201ENST00000430042 390 ntBASIC4.49□□□□□ -1.69
NEK3P51956 RPS29P17-201ENST00000430795 166 ntBASIC4.49□□□□□ -1.69
NEK3P51956 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.49□□□□□ -1.69
NEK3P51956 AC091390.1-201ENST00000433904 331 ntBASIC4.49□□□□□ -1.69
NEK3P51956 LARP1BP3-201ENST00000437229 869 ntBASIC4.49□□□□□ -1.69
NEK3P51956 SKP1P1-201ENST00000438081 489 ntBASIC4.49□□□□□ -1.69
NEK3P51956 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.49□□□□□ -1.69
NEK3P51956 AL353748.1-201ENST00000440753 474 ntBASIC4.49□□□□□ -1.69
NEK3P51956 PHBP16-201ENST00000446318 950 ntBASIC4.49□□□□□ -1.69
NEK3P51956 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.49□□□□□ -1.69
NEK3P51956 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.49□□□□□ -1.69
NEK3P51956 RPS27AP8-201ENST00000452665 445 ntBASIC4.49□□□□□ -1.69
NEK3P51956 AC234775.1-201ENST00000454247 670 ntBASIC4.49□□□□□ -1.69
NEK3P51956 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.49□□□□□ -1.69
NEK3P51956 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.49□□□□□ -1.69
NEK3P51956 snoU13.4-201ENST00000458916 104 ntBASIC4.49□□□□□ -1.69
NEK3P51956 RN7SL98P-201ENST00000462271 300 ntBASIC4.49□□□□□ -1.69
NEK3P51956 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.49□□□□□ -1.69
NEK3P51956 RPS26P3-201ENST00000470205 348 ntBASIC4.49□□□□□ -1.69
NEK3P51956 AC090543.2-201ENST00000483963 348 ntBASIC4.49□□□□□ -1.69
NEK3P51956 AC004057.1-201ENST00000485827 348 ntBASIC4.49□□□□□ -1.69
NEK3P51956 AL024509.2-201ENST00000493462 493 ntBASIC4.49□□□□□ -1.69
NEK3P51956 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.49□□□□□ -1.69
NEK3P51956 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.49□□□□□ -1.69
NEK3P51956 AC006499.6-201ENST00000511169 607 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms