Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AL162151.2-201ENST00000448875 158 ntBASIC3.38□□□□□ -1.87
CDX1P47902 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.38□□□□□ -1.87
CDX1P47902 ABCF2P2-201ENST00000450549 296 ntBASIC3.38□□□□□ -1.87
CDX1P47902 HMGN2P7-201ENST00000456186 273 ntBASIC3.38□□□□□ -1.87
CDX1P47902 UQCRHP4-201ENST00000471686 272 ntBASIC3.38□□□□□ -1.87
CDX1P47902 AC017015.1-201ENST00000477387 286 ntBASIC3.38□□□□□ -1.87
CDX1P47902 RPL35P6-201ENST00000490024 372 ntBASIC3.38□□□□□ -1.87
CDX1P47902 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.38□□□□□ -1.87
CDX1P47902 AC118282.1-201ENST00000506408 765 ntBASIC3.38□□□□□ -1.87
CDX1P47902 TXNP6-201ENST00000510190 310 ntBASIC3.38□□□□□ -1.87
CDX1P47902 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.38□□□□□ -1.87
CDX1P47902 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.38□□□□□ -1.87
CDX1P47902 SNRPGP16-201ENST00000533275 226 ntBASIC3.38□□□□□ -1.87
CDX1P47902 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.38□□□□□ -1.87
CDX1P47902 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.38□□□□□ -1.87
CDX1P47902 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.38□□□□□ -1.87
CDX1P47902 AC090888.2-201ENST00000559765 1144 ntBASIC3.38□□□□□ -1.87
CDX1P47902 OR4K8P-201ENST00000578842 1048 ntBASIC3.38□□□□□ -1.87
CDX1P47902 MIR5047-201ENST00000579212 100 ntBASIC3.38□□□□□ -1.87
CDX1P47902 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.38□□□□□ -1.87
CDX1P47902 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.38□□□□□ -1.87
CDX1P47902 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.38□□□□□ -1.87
CDX1P47902 VN1R92P-201ENST00000598511 928 ntBASIC3.38□□□□□ -1.87
CDX1P47902 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.38□□□□□ -1.87
CDX1P47902 AC020910.2-201ENST00000603635 610 ntBASIC3.38□□□□□ -1.87
CDX1P47902 AP001330.4-201ENST00000604350 154 ntBASIC3.38□□□□□ -1.87
CDX1P47902 AL365503.1-201ENST00000605247 905 ntBASIC3.38□□□□□ -1.87
CDX1P47902 AL021997.2-201ENST00000615674 271 ntBASIC3.38□□□□□ -1.87
CDX1P47902 AL355493.4-201ENST00000618530 292 ntBASIC3.38□□□□□ -1.87
CDX1P47902 AL731566.2-201ENST00000618971 317 ntBASIC3.38□□□□□ -1.87
CDX1P47902 MIR3653-201ENST00000625572 110 ntBASIC3.38□□□□□ -1.87
CDX1P47902 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.38□□□□□ -1.87
CDX1P47902 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDX1P47902 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
CDX1P47902 AF127577.6-201ENST00000623352 2191 ntBASIC3.38□□□□□ -1.87
CDX1P47902 SGO1P2-201ENST00000429458 1589 ntBASIC3.38□□□□□ -1.87
CDX1P47902 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CDX1P47902 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDX1P47902 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.37□□□□□ -1.87
CDX1P47902 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.37□□□□□ -1.87
CDX1P47902 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.37□□□□□ -1.87
CDX1P47902 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDX1P47902 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.37□□□□□ -1.87
CDX1P47902 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDX1P47902 RNU6-1155P-201ENST00000363554 107 ntBASIC3.37□□□□□ -1.87
CDX1P47902 RNU6-173P-201ENST00000364215 104 ntBASIC3.37□□□□□ -1.87
CDX1P47902 RNU1-132P-201ENST00000364300 164 ntBASIC3.37□□□□□ -1.87
CDX1P47902 RNU6-343P-201ENST00000364709 104 ntBASIC3.37□□□□□ -1.87
CDX1P47902 DEFB109C-201ENST00000382575 264 ntBASIC3.37□□□□□ -1.87
CDX1P47902 DEFB109B-201ENST00000382656 264 ntBASIC3.37□□□□□ -1.87
CDX1P47902 RNU6-1200P-201ENST00000384162 107 ntBASIC3.37□□□□□ -1.87
CDX1P47902 RPS3AP26-201ENST00000398259 784 ntBASIC3.37□□□□□ -1.87
CDX1P47902 AL139095.3-201ENST00000419672 1203 ntBASIC3.37□□□□□ -1.87
CDX1P47902 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.37□□□□□ -1.87
CDX1P47902 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.37□□□□□ -1.87
CDX1P47902 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.37□□□□□ -1.87
CDX1P47902 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.37□□□□□ -1.87
CDX1P47902 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.37□□□□□ -1.87
CDX1P47902 YWHAZP7-201ENST00000436906 631 ntBASIC3.37□□□□□ -1.87
CDX1P47902 AL008629.1-201ENST00000438615 184 ntBASIC3.37□□□□□ -1.87
CDX1P47902 AL662791.1-201ENST00000441992 928 ntBASIC3.37□□□□□ -1.87
CDX1P47902 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.37□□□□□ -1.87
CDX1P47902 AL359073.1-201ENST00000448036 403 ntBASIC3.37□□□□□ -1.87
CDX1P47902 NUTF2P3-201ENST00000448540 384 ntBASIC3.37□□□□□ -1.87
CDX1P47902 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.37□□□□□ -1.87
CDX1P47902 RPL23AP31-201ENST00000456160 467 ntBASIC3.37□□□□□ -1.87
CDX1P47902 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.37□□□□□ -1.87
CDX1P47902 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.37□□□□□ -1.87
CDX1P47902 RPL7P1-201ENST00000468161 747 ntBASIC3.37□□□□□ -1.87
CDX1P47902 RPL23AP14-201ENST00000468281 468 ntBASIC3.37□□□□□ -1.87
CDX1P47902 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.37□□□□□ -1.87
CDX1P47902 AC068587.1-201ENST00000483613 781 ntBASIC3.37□□□□□ -1.87
CDX1P47902 AC105137.1-201ENST00000484355 562 ntBASIC3.37□□□□□ -1.87
CDX1P47902 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.37□□□□□ -1.87
CDX1P47902 NDUFB4P9-201ENST00000511646 388 ntBASIC3.37□□□□□ -1.87
CDX1P47902 MTND5P4-201ENST00000514978 288 ntBASIC3.37□□□□□ -1.87
CDX1P47902 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.37□□□□□ -1.87
CDX1P47902 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.37□□□□□ -1.87
CDX1P47902 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.37□□□□□ -1.87
CDX1P47902 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.37□□□□□ -1.87
CDX1P47902 RPL23AP87-202ENST00000573039 466 ntBASIC3.37□□□□□ -1.87
CDX1P47902 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.37□□□□□ -1.87
CDX1P47902 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.37□□□□□ -1.87
CDX1P47902 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.37□□□□□ -1.87
CDX1P47902 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.37□□□□□ -1.87
CDX1P47902 AC020914.6-201ENST00000594327 272 ntBASIC3.37□□□□□ -1.87
CDX1P47902 AC022146.1-201ENST00000595307 847 ntBASIC3.37□□□□□ -1.87
CDX1P47902 AC011451.2-201ENST00000604303 598 ntBASIC3.37□□□□□ -1.87
CDX1P47902 AL022099.1-201ENST00000604551 712 ntBASIC3.37□□□□□ -1.87
CDX1P47902 AC090186.1-201ENST00000605991 572 ntBASIC3.37□□□□□ -1.87
CDX1P47902 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.37□□□□□ -1.87
CDX1P47902 AL355810.1-201ENST00000614629 552 ntBASIC3.37□□□□□ -1.87
CDX1P47902 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
CDX1P47902 AL445567.2-201ENST00000618935 498 ntBASIC3.37□□□□□ -1.87
CDX1P47902 AL356596.1-201ENST00000624230 379 ntBASIC3.37□□□□□ -1.87
CDX1P47902 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.37□□□□□ -1.87
CDX1P47902 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.37□□□□□ -1.87
CDX1P47902 AC011477.1-204ENST00000623416 1325 ntBASIC3.37□□□□□ -1.87
CDX1P47902 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.37□□□□□ -1.87
CDX1P47902 AL158163.1-201ENST00000603915 1649 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms