Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC091925.2-201ENST00000625059 256 ntBASIC3.77□□□□□ -1.81
HNF4AP41235 AC068724.3-201ENST00000625906 87 ntBASIC3.77□□□□□ -1.81
HNF4AP41235 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.77□□□□□ -1.81
HNF4AP41235 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HNF4AP41235 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HNF4AP41235 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HNF4AP41235 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
HNF4AP41235 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.76□□□□□ -1.81
HNF4AP41235 SGO1P2-201ENST00000429458 1589 ntBASIC3.76□□□□□ -1.81
HNF4AP41235 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.76□□□□□ -1.81
HNF4AP41235 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.76□□□□□ -1.81
HNF4AP41235 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HNF4AP41235 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.76□□□□□ -1.81
HNF4AP41235 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
HNF4AP41235 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HNF4AP41235 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HNF4AP41235 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
HNF4AP41235 RNU4-92P-201ENST00000363783 136 ntBASIC3.76□□□□□ -1.81
HNF4AP41235 SNORD51-201ENST00000384320 80 ntBASIC3.76□□□□□ -1.81
HNF4AP41235 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HNF4AP41235 HLFP1-201ENST00000402375 499 ntBASIC3.76□□□□□ -1.81
HNF4AP41235 AL079342.2-201ENST00000403367 482 ntBASIC3.76□□□□□ -1.81
HNF4AP41235 AL591034.1-201ENST00000407447 340 ntBASIC3.76□□□□□ -1.81
HNF4AP41235 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.76□□□□□ -1.81
HNF4AP41235 AC092447.6-201ENST00000414578 210 ntBASIC3.76□□□□□ -1.81
HNF4AP41235 AC107081.1-201ENST00000414975 361 ntBASIC3.76□□□□□ -1.81
HNF4AP41235 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.76□□□□□ -1.81
HNF4AP41235 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HNF4AP41235 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.76□□□□□ -1.81
HNF4AP41235 OR1AA1P-201ENST00000419597 916 ntBASIC3.76□□□□□ -1.81
HNF4AP41235 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.76□□□□□ -1.81
HNF4AP41235 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HNF4AP41235 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.76□□□□□ -1.81
HNF4AP41235 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.76□□□□□ -1.81
HNF4AP41235 ARF4P2-201ENST00000430209 526 ntBASIC3.76□□□□□ -1.81
HNF4AP41235 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.76□□□□□ -1.81
HNF4AP41235 HSFY6P-201ENST00000445573 403 ntBASIC3.76□□□□□ -1.81
HNF4AP41235 PTENP1-201ENST00000447117 1215 ntBASIC3.76□□□□□ -1.81
HNF4AP41235 RPS23P3-201ENST00000470993 430 ntBASIC3.76□□□□□ -1.81
HNF4AP41235 RPL23AP44-201ENST00000482216 473 ntBASIC3.76□□□□□ -1.81
HNF4AP41235 AC068587.1-201ENST00000483613 781 ntBASIC3.76□□□□□ -1.81
HNF4AP41235 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.76□□□□□ -1.81
HNF4AP41235 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.76□□□□□ -1.81
HNF4AP41235 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
HNF4AP41235 AC002456.2-201ENST00000509356 380 ntBASIC3.76□□□□□ -1.81
HNF4AP41235 AC010625.1-201ENST00000511296 403 ntBASIC3.76□□□□□ -1.81
HNF4AP41235 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.76□□□□□ -1.81
HNF4AP41235 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.76□□□□□ -1.81
HNF4AP41235 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.76□□□□□ -1.81
HNF4AP41235 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
HNF4AP41235 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.76□□□□□ -1.81
HNF4AP41235 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.76□□□□□ -1.81
HNF4AP41235 AC145350.1-201ENST00000567426 208 ntBASIC3.76□□□□□ -1.81
HNF4AP41235 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.76□□□□□ -1.81
HNF4AP41235 MIR5047-201ENST00000579212 100 ntBASIC3.76□□□□□ -1.81
HNF4AP41235 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.76□□□□□ -1.81
HNF4AP41235 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.76□□□□□ -1.81
HNF4AP41235 AL592436.1-201ENST00000605135 558 ntBASIC3.76□□□□□ -1.81
HNF4AP41235 AL139344.1-201ENST00000605228 195 ntBASIC3.76□□□□□ -1.81
HNF4AP41235 AL034351.1-201ENST00000605288 668 ntBASIC3.76□□□□□ -1.81
HNF4AP41235 AC016877.3-201ENST00000606778 504 ntBASIC3.76□□□□□ -1.81
HNF4AP41235 AL391497.1-201ENST00000608671 547 ntBASIC3.76□□□□□ -1.81
HNF4AP41235 AL110115.1-201ENST00000614396 364 ntBASIC3.76□□□□□ -1.81
HNF4AP41235 AC015967.1-201ENST00000619893 476 ntBASIC3.76□□□□□ -1.81
HNF4AP41235 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.76□□□□□ -1.81
HNF4AP41235 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.76□□□□□ -1.81
HNF4AP41235 MFSD8-245ENST00000641743 948 ntBASIC3.76□□□□□ -1.81
HNF4AP41235 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HNF4AP41235 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HNF4AP41235 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HNF4AP41235 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.75□□□□□ -1.81
HNF4AP41235 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.75□□□□□ -1.81
HNF4AP41235 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HNF4AP41235 RNA5SP479-201ENST00000364858 117 ntBASIC3.75□□□□□ -1.81
HNF4AP41235 RNA5SP97-201ENST00000365006 84 ntBASIC3.75□□□□□ -1.81
HNF4AP41235 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
HNF4AP41235 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
HNF4AP41235 RNU6-878P-201ENST00000384578 110 ntBASIC3.75□□□□□ -1.81
HNF4AP41235 RNY3P9-201ENST00000384727 106 ntBASIC3.75□□□□□ -1.81
HNF4AP41235 MIR506-201ENST00000384998 124 ntBASIC3.75□□□□□ -1.81
HNF4AP41235 MIR199A2-201ENST00000385289 110 ntBASIC3.75□□□□□ -1.81
HNF4AP41235 RNU2-15P-201ENST00000410692 191 ntBASIC3.75□□□□□ -1.81
HNF4AP41235 OR4K6P-201ENST00000416478 897 ntBASIC3.75□□□□□ -1.81
HNF4AP41235 Z97055.1-201ENST00000419730 712 ntBASIC3.75□□□□□ -1.81
HNF4AP41235 YPEL5P1-201ENST00000419731 367 ntBASIC3.75□□□□□ -1.81
HNF4AP41235 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.75□□□□□ -1.81
HNF4AP41235 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.75□□□□□ -1.81
HNF4AP41235 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
HNF4AP41235 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.75□□□□□ -1.81
HNF4AP41235 RPL21P89-201ENST00000444021 467 ntBASIC3.75□□□□□ -1.81
HNF4AP41235 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.75□□□□□ -1.81
HNF4AP41235 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.75□□□□□ -1.81
HNF4AP41235 AC098824.1-201ENST00000453565 980 ntBASIC3.75□□□□□ -1.81
HNF4AP41235 RPL23AP31-201ENST00000456160 467 ntBASIC3.75□□□□□ -1.81
HNF4AP41235 AC092757.1-201ENST00000467293 467 ntBASIC3.75□□□□□ -1.81
HNF4AP41235 AC017015.1-201ENST00000477387 286 ntBASIC3.75□□□□□ -1.81
HNF4AP41235 AP000563.1-201ENST00000490865 758 ntBASIC3.75□□□□□ -1.81
HNF4AP41235 AC108941.1-201ENST00000502853 530 ntBASIC3.75□□□□□ -1.81
HNF4AP41235 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.75□□□□□ -1.81
HNF4AP41235 KLHL2P1-201ENST00000508691 521 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms