Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AC233728.2-201ENST00000425348 757 ntBASIC2.1□□□□□ -2.07
SNCAP37840 AC073508.1-201ENST00000428866 656 ntBASIC2.1□□□□□ -2.07
SNCAP37840 AC112220.1-201ENST00000434628 355 ntBASIC2.1□□□□□ -2.07
SNCAP37840 AC044797.1-201ENST00000445744 679 ntBASIC2.1□□□□□ -2.07
SNCAP37840 HMGB1P25-201ENST00000468402 607 ntBASIC2.1□□□□□ -2.07
SNCAP37840 CAB39P1-201ENST00000502277 460 ntBASIC2.1□□□□□ -2.07
SNCAP37840 VN1R104P-201ENST00000505115 1009 ntBASIC2.1□□□□□ -2.07
SNCAP37840 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.1□□□□□ -2.07
SNCAP37840 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.1□□□□□ -2.07
SNCAP37840 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.1□□□□□ -2.07
SNCAP37840 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
SNCAP37840 CENPUP2-201ENST00000555897 1186 ntBASIC2.1□□□□□ -2.07
SNCAP37840 SNRPGP15-201ENST00000600149 222 ntBASIC2.1□□□□□ -2.07
SNCAP37840 AP003117.1-201ENST00000602771 554 ntBASIC2.1□□□□□ -2.07
SNCAP37840 AC079880.2-201ENST00000603790 1213 ntBASIC2.1□□□□□ -2.07
SNCAP37840 MIR6895-201ENST00000613497 78 ntBASIC2.1□□□□□ -2.07
SNCAP37840 MIR8057-201ENST00000620957 69 ntBASIC2.1□□□□□ -2.07
SNCAP37840 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
SNCAP37840 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.1□□□□□ -2.07
SNCAP37840 AC090897.3-201ENST00000636973 1157 ntBASIC2.1□□□□□ -2.07
SNCAP37840 ZNF807-201ENST00000328088 1707 ntBASIC2.1□□□□□ -2.07
SNCAP37840 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SNCAP37840 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.1□□□□□ -2.07
SNCAP37840 PABPC1P9-201ENST00000426076 1612 ntBASIC2.09□□□□□ -2.07
SNCAP37840 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
SNCAP37840 AL139276.1-201ENST00000311910 1001 ntBASIC2.09□□□□□ -2.07
SNCAP37840 SEPT7P2-202ENST00000398921 823 ntBASIC2.09□□□□□ -2.07
SNCAP37840 DHFRP5-201ENST00000406944 564 ntBASIC2.09□□□□□ -2.07
SNCAP37840 AF274854.1-201ENST00000413236 615 ntBASIC2.09□□□□□ -2.07
SNCAP37840 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.09□□□□□ -2.07
SNCAP37840 USP9YP27-201ENST00000418455 438 ntBASIC2.09□□□□□ -2.07
SNCAP37840 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
SNCAP37840 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.09□□□□□ -2.07
SNCAP37840 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.09□□□□□ -2.07
SNCAP37840 MTCO3P35-201ENST00000485582 781 ntBASIC2.09□□□□□ -2.07
SNCAP37840 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.09□□□□□ -2.07
SNCAP37840 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.09□□□□□ -2.07
SNCAP37840 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC2.09□□□□□ -2.07
SNCAP37840 AC009901.1-201ENST00000506703 541 ntBASIC2.09□□□□□ -2.07
SNCAP37840 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.09□□□□□ -2.07
SNCAP37840 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.09□□□□□ -2.07
SNCAP37840 AC093755.1-201ENST00000512950 1023 ntBASIC2.09□□□□□ -2.07
SNCAP37840 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.09□□□□□ -2.07
SNCAP37840 RNA5SP82-201ENST00000516707 92 ntBASIC2.09□□□□□ -2.07
SNCAP37840 MTCYBP41-201ENST00000528913 1123 ntBASIC2.09□□□□□ -2.07
SNCAP37840 AC087241.2-201ENST00000535801 324 ntBASIC2.09□□□□□ -2.07
SNCAP37840 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC2.09□□□□□ -2.07
SNCAP37840 AC007954.1-201ENST00000554198 494 ntBASIC2.09□□□□□ -2.07
SNCAP37840 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SNCAP37840 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.09□□□□□ -2.07
SNCAP37840 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC2.09□□□□□ -2.07
SNCAP37840 AC007336.1-201ENST00000576365 3828 ntBASIC2.09□□□□□ -2.07
SNCAP37840 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.09□□□□□ -2.07
SNCAP37840 AL355816.1-201ENST00000607951 118 ntBASIC2.09□□□□□ -2.07
SNCAP37840 AC239803.2-201ENST00000610161 430 ntBASIC2.09□□□□□ -2.07
SNCAP37840 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
SNCAP37840 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
SNCAP37840 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
SNCAP37840 AC012321.1-201ENST00000561622 1588 ntBASIC2.09□□□□□ -2.08
SNCAP37840 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.08□□□□□ -2.08
SNCAP37840 AC005336.3-201ENST00000623833 2679 ntBASIC2.08□□□□□ -2.08
SNCAP37840 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.08□□□□□ -2.08
SNCAP37840 MTCO1P8-201ENST00000416914 1523 ntBASIC2.08□□□□□ -2.08
SNCAP37840 SNORA14A-201ENST00000364773 135 ntBASIC2.08□□□□□ -2.08
SNCAP37840 RNU6-1180P-201ENST00000364935 107 ntBASIC2.08□□□□□ -2.08
SNCAP37840 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SNCAP37840 UBA52P6-201ENST00000399822 382 ntBASIC2.08□□□□□ -2.08
SNCAP37840 USP9YP20-201ENST00000419224 558 ntBASIC2.08□□□□□ -2.08
SNCAP37840 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.08□□□□□ -2.08
SNCAP37840 AC093716.1-201ENST00000435923 377 ntBASIC2.08□□□□□ -2.08
SNCAP37840 LSM1P1-201ENST00000438629 273 ntBASIC2.08□□□□□ -2.08
SNCAP37840 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.08□□□□□ -2.08
SNCAP37840 RPS24P13-201ENST00000442520 397 ntBASIC2.08□□□□□ -2.08
SNCAP37840 AC234775.1-201ENST00000454247 670 ntBASIC2.08□□□□□ -2.08
SNCAP37840 RPS29P26-201ENST00000477483 171 ntBASIC2.08□□□□□ -2.08
SNCAP37840 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.08□□□□□ -2.08
SNCAP37840 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC2.08□□□□□ -2.08
SNCAP37840 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.08□□□□□ -2.08
SNCAP37840 NAMPTP2-201ENST00000505629 1115 ntBASIC2.08□□□□□ -2.08
SNCAP37840 AC026427.2-201ENST00000506228 536 ntBASIC2.08□□□□□ -2.08
SNCAP37840 RNU1-61P-201ENST00000516107 151 ntBASIC2.08□□□□□ -2.08
SNCAP37840 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.08□□□□□ -2.08
SNCAP37840 CASP1-216ENST00000534497 825 ntTSL 5 BASIC2.08□□□□□ -2.08
SNCAP37840 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.08□□□□□ -2.08
SNCAP37840 MIR4325-201ENST00000583049 90 ntBASIC2.08□□□□□ -2.08
SNCAP37840 AC113194.1-201ENST00000606037 500 ntBASIC2.08□□□□□ -2.08
SNCAP37840 AC093732.2-201ENST00000607950 274 ntBASIC2.08□□□□□ -2.08
SNCAP37840 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.08□□□□□ -2.08
SNCAP37840 AC002064.3-201ENST00000623448 346 ntBASIC2.08□□□□□ -2.08
SNCAP37840 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.08□□□□□ -2.08
SNCAP37840 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SNCAP37840 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.08□□□□□ -2.08
SNCAP37840 CUL1P1-201ENST00000509510 2425 ntBASIC2.07□□□□□ -2.08
SNCAP37840 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.07□□□□□ -2.08
SNCAP37840 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SNCAP37840 SNORA18.3-201ENST00000384122 132 ntBASIC2.07□□□□□ -2.08
SNCAP37840 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.07□□□□□ -2.08
SNCAP37840 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.07□□□□□ -2.08
SNCAP37840 LSM5-206ENST00000409987 504 ntTSL 5 BASIC2.07□□□□□ -2.08
SNCAP37840 KRR1P1-201ENST00000419430 803 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms