Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.06□□□□□ -1.76
HOXD13P35453 AC126177.3-201ENST00000551839 688 ntBASIC4.06□□□□□ -1.76
HOXD13P35453 CBX3P5-201ENST00000552017 521 ntBASIC4.06□□□□□ -1.76
HOXD13P35453 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.06□□□□□ -1.76
HOXD13P35453 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.06□□□□□ -1.76
HOXD13P35453 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.06□□□□□ -1.76
HOXD13P35453 AC087465.1-201ENST00000560574 245 ntBASIC4.06□□□□□ -1.76
HOXD13P35453 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.06□□□□□ -1.76
HOXD13P35453 VN1R78P-201ENST00000597393 564 ntBASIC4.06□□□□□ -1.76
HOXD13P35453 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.06□□□□□ -1.76
HOXD13P35453 XIAPP1-201ENST00000603162 600 ntBASIC4.06□□□□□ -1.76
HOXD13P35453 AL592221.1-201ENST00000605266 382 ntBASIC4.06□□□□□ -1.76
HOXD13P35453 AC110741.2-201ENST00000605278 268 ntBASIC4.06□□□□□ -1.76
HOXD13P35453 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.06□□□□□ -1.76
HOXD13P35453 AC005344.1-201ENST00000613391 459 ntBASIC4.06□□□□□ -1.76
HOXD13P35453 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HOXD13P35453 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.06□□□□□ -1.76
HOXD13P35453 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
HOXD13P35453 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HOXD13P35453 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HOXD13P35453 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HOXD13P35453 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
HOXD13P35453 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.06□□□□□ -1.76
HOXD13P35453 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HOXD13P35453 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.06□□□□□ -1.76
HOXD13P35453 ZNF876P-202ENST00000398732 1485 ntBASIC4.05□□□□□ -1.76
HOXD13P35453 AP004289.2-201ENST00000444413 1457 ntBASIC4.05□□□□□ -1.76
HOXD13P35453 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.05□□□□□ -1.76
HOXD13P35453 AL133383.2-201ENST00000622958 2336 ntBASIC4.05□□□□□ -1.76
HOXD13P35453 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
HOXD13P35453 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
HOXD13P35453 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HOXD13P35453 RPL23AP57-201ENST00000332361 466 ntBASIC4.05□□□□□ -1.76
HOXD13P35453 FAM133CP-201ENST00000332869 704 ntBASIC4.05□□□□□ -1.76
HOXD13P35453 SNORD3H-201ENST00000384486 214 ntBASIC4.05□□□□□ -1.76
HOXD13P35453 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
HOXD13P35453 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
HOXD13P35453 AC007066.1-201ENST00000392902 381 ntBASIC4.05□□□□□ -1.76
HOXD13P35453 HSPE1P26-201ENST00000405341 275 ntBASIC4.05□□□□□ -1.76
HOXD13P35453 RPS3AP25-201ENST00000411660 793 ntBASIC4.05□□□□□ -1.76
HOXD13P35453 USP9YP33-201ENST00000412220 421 ntBASIC4.05□□□□□ -1.76
HOXD13P35453 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.05□□□□□ -1.76
HOXD13P35453 TOMM22P1-201ENST00000418578 312 ntBASIC4.05□□□□□ -1.76
HOXD13P35453 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HOXD13P35453 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.05□□□□□ -1.76
HOXD13P35453 AL445584.1-201ENST00000431451 330 ntBASIC4.05□□□□□ -1.76
HOXD13P35453 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.05□□□□□ -1.76
HOXD13P35453 RPS25P9-201ENST00000435591 252 ntBASIC4.05□□□□□ -1.76
HOXD13P35453 USP9YP35-201ENST00000435696 412 ntBASIC4.05□□□□□ -1.76
HOXD13P35453 SKP1P1-201ENST00000438081 489 ntBASIC4.05□□□□□ -1.76
HOXD13P35453 MUPP-201ENST00000438111 566 ntBASIC4.05□□□□□ -1.76
HOXD13P35453 AP001992.1-205ENST00000462248 379 ntBASIC4.05□□□□□ -1.76
HOXD13P35453 RPL9P32-201ENST00000464118 620 ntBASIC4.05□□□□□ -1.76
HOXD13P35453 RPS4XP10-201ENST00000465034 731 ntBASIC4.05□□□□□ -1.76
HOXD13P35453 RPL23AP55-201ENST00000498163 452 ntBASIC4.05□□□□□ -1.76
HOXD13P35453 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.05□□□□□ -1.76
HOXD13P35453 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.05□□□□□ -1.76
HOXD13P35453 AC034244.1-201ENST00000507687 207 ntBASIC4.05□□□□□ -1.76
HOXD13P35453 AC004062.1-201ENST00000509926 645 ntBASIC4.05□□□□□ -1.76
HOXD13P35453 AC006499.2-201ENST00000513470 337 ntBASIC4.05□□□□□ -1.76
HOXD13P35453 RNU5A-4P-201ENST00000516588 111 ntBASIC4.05□□□□□ -1.76
HOXD13P35453 IGKV2D-23-201ENST00000518179 286 ntBASIC4.05□□□□□ -1.76
HOXD13P35453 DEFB131D-201ENST00000526803 184 ntBASIC4.05□□□□□ -1.76
HOXD13P35453 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.05□□□□□ -1.76
HOXD13P35453 AC018630.1-201ENST00000541376 925 ntBASIC4.05□□□□□ -1.76
HOXD13P35453 AC023161.2-201ENST00000551218 780 ntBASIC4.05□□□□□ -1.76
HOXD13P35453 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.05□□□□□ -1.76
HOXD13P35453 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.05□□□□□ -1.76
HOXD13P35453 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.05□□□□□ -1.76
HOXD13P35453 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.05□□□□□ -1.76
HOXD13P35453 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.05□□□□□ -1.76
HOXD13P35453 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
HOXD13P35453 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
HOXD13P35453 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HOXD13P35453 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.05□□□□□ -1.76
HOXD13P35453 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HOXD13P35453 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.04□□□□□ -1.76
HOXD13P35453 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HOXD13P35453 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXD13P35453 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HOXD13P35453 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
HOXD13P35453 RNA5SP124-201ENST00000362739 110 ntBASIC4.04□□□□□ -1.76
HOXD13P35453 RNU6-283P-201ENST00000364788 107 ntBASIC4.04□□□□□ -1.76
HOXD13P35453 Z98941.1-201ENST00000407764 100 ntBASIC4.04□□□□□ -1.76
HOXD13P35453 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXD13P35453 CRYBB2P1-203ENST00000415709 538 ntBASIC4.04□□□□□ -1.76
HOXD13P35453 RPL22P18-201ENST00000417197 377 ntBASIC4.04□□□□□ -1.76
HOXD13P35453 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HOXD13P35453 OR1AA1P-201ENST00000419597 916 ntBASIC4.04□□□□□ -1.76
HOXD13P35453 AL137014.1-201ENST00000420490 1226 ntBASIC4.04□□□□□ -1.76
HOXD13P35453 RPL7P2-201ENST00000427639 268 ntBASIC4.04□□□□□ -1.76
HOXD13P35453 SETD6P1-201ENST00000444575 317 ntBASIC4.04□□□□□ -1.76
HOXD13P35453 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.04□□□□□ -1.76
HOXD13P35453 snoU13.4-201ENST00000458916 104 ntBASIC4.04□□□□□ -1.76
HOXD13P35453 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.04□□□□□ -1.76
HOXD13P35453 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HOXD13P35453 AP001086.1-201ENST00000494882 321 ntBASIC4.04□□□□□ -1.76
HOXD13P35453 UBE2CP3-201ENST00000502715 450 ntBASIC4.04□□□□□ -1.76
HOXD13P35453 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.04□□□□□ -1.76
HOXD13P35453 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms