Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.25□□□□□ -1.89
CASQ1P31415 AC008571.1-201ENST00000467232 300 ntBASIC3.25□□□□□ -1.89
CASQ1P31415 RPS17P11-201ENST00000474297 293 ntBASIC3.25□□□□□ -1.89
CASQ1P31415 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.25□□□□□ -1.89
CASQ1P31415 MTND3P24-201ENST00000506306 329 ntBASIC3.25□□□□□ -1.89
CASQ1P31415 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.25□□□□□ -1.89
CASQ1P31415 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CASQ1P31415 RN7SL339P-201ENST00000580597 296 ntBASIC3.25□□□□□ -1.89
CASQ1P31415 AC125494.3-201ENST00000602759 455 ntBASIC3.25□□□□□ -1.89
CASQ1P31415 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.25□□□□□ -1.89
CASQ1P31415 MIR6758-201ENST00000620653 63 ntBASIC3.25□□□□□ -1.89
CASQ1P31415 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CASQ1P31415 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CASQ1P31415 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.25□□□□□ -1.89
CASQ1P31415 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
CASQ1P31415 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
CASQ1P31415 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
CASQ1P31415 NACA3P-201ENST00000359690 648 ntBASIC3.24□□□□□ -1.89
CASQ1P31415 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.24□□□□□ -1.89
CASQ1P31415 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CASQ1P31415 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.24□□□□□ -1.89
CASQ1P31415 AL049693.1-201ENST00000402760 611 ntBASIC3.24□□□□□ -1.89
CASQ1P31415 AL356057.2-201ENST00000403318 432 ntBASIC3.24□□□□□ -1.89
CASQ1P31415 HMGN2P35-201ENST00000412164 270 ntBASIC3.24□□□□□ -1.89
CASQ1P31415 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.24□□□□□ -1.89
CASQ1P31415 AC010881.1-201ENST00000433830 235 ntBASIC3.24□□□□□ -1.89
CASQ1P31415 KCTD10P1-201ENST00000434203 625 ntBASIC3.24□□□□□ -1.89
CASQ1P31415 AC092641.1-201ENST00000440229 772 ntBASIC3.24□□□□□ -1.89
CASQ1P31415 RPL21P23-201ENST00000446654 460 ntBASIC3.24□□□□□ -1.89
CASQ1P31415 AC004022.1-201ENST00000447766 1066 ntBASIC3.24□□□□□ -1.89
CASQ1P31415 RPL23AP11-201ENST00000475260 469 ntBASIC3.24□□□□□ -1.89
CASQ1P31415 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CASQ1P31415 AC015724.1-201ENST00000478577 156 ntBASIC3.24□□□□□ -1.89
CASQ1P31415 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.24□□□□□ -1.89
CASQ1P31415 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.24□□□□□ -1.89
CASQ1P31415 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.24□□□□□ -1.89
CASQ1P31415 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.24□□□□□ -1.89
CASQ1P31415 AC126177.3-201ENST00000551839 688 ntBASIC3.24□□□□□ -1.89
CASQ1P31415 EIF1AXP2-201ENST00000555940 413 ntBASIC3.24□□□□□ -1.89
CASQ1P31415 AC053481.3-201ENST00000577881 843 ntBASIC3.24□□□□□ -1.89
CASQ1P31415 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.24□□□□□ -1.89
CASQ1P31415 AC006504.3-201ENST00000586818 523 ntBASIC3.24□□□□□ -1.89
CASQ1P31415 AC008739.2-201ENST00000597006 317 ntBASIC3.24□□□□□ -1.89
CASQ1P31415 PRELID3BP8-201ENST00000604148 295 ntBASIC3.24□□□□□ -1.89
CASQ1P31415 AL023583.1-201ENST00000607518 1143 ntBASIC3.24□□□□□ -1.89
CASQ1P31415 MIR6820-201ENST00000611508 62 ntBASIC3.24□□□□□ -1.89
CASQ1P31415 AC100793.4-201ENST00000613683 429 ntBASIC3.24□□□□□ -1.89
CASQ1P31415 AC024595.1-201ENST00000623088 387 ntBASIC3.24□□□□□ -1.89
CASQ1P31415 AC103798.2-201ENST00000624292 632 ntBASIC3.24□□□□□ -1.89
CASQ1P31415 AC009093.8-201ENST00000641769 292 ntBASIC3.24□□□□□ -1.89
CASQ1P31415 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
CASQ1P31415 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
CASQ1P31415 RNU6-444P-201ENST00000383988 108 ntBASIC3.23□□□□□ -1.89
CASQ1P31415 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CASQ1P31415 AC063979.1-201ENST00000415539 377 ntBASIC3.23□□□□□ -1.89
CASQ1P31415 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.23□□□□□ -1.89
CASQ1P31415 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.23□□□□□ -1.89
CASQ1P31415 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.23□□□□□ -1.89
CASQ1P31415 MRPS33P4-201ENST00000434892 317 ntBASIC3.23□□□□□ -1.89
CASQ1P31415 MTND2P21-201ENST00000436242 1042 ntBASIC3.23□□□□□ -1.89
CASQ1P31415 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.23□□□□□ -1.89
CASQ1P31415 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.23□□□□□ -1.89
CASQ1P31415 AC106707.2-201ENST00000484182 374 ntBASIC3.23□□□□□ -1.89
CASQ1P31415 MTCO1P31-201ENST00000506355 492 ntBASIC3.23□□□□□ -1.89
CASQ1P31415 HPRT1P1-201ENST00000509498 657 ntBASIC3.23□□□□□ -1.89
CASQ1P31415 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.23□□□□□ -1.89
CASQ1P31415 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CASQ1P31415 RPPH1-2P-201ENST00000516688 293 ntBASIC3.23□□□□□ -1.89
CASQ1P31415 RPL21P12-201ENST00000559810 515 ntBASIC3.23□□□□□ -1.89
CASQ1P31415 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.23□□□□□ -1.89
CASQ1P31415 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CASQ1P31415 AL137843.1-201ENST00000605078 385 ntBASIC3.23□□□□□ -1.89
CASQ1P31415 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.23□□□□□ -1.89
CASQ1P31415 AC009464.1-201ENST00000615731 469 ntBASIC3.23□□□□□ -1.89
CASQ1P31415 Z99129.2-201ENST00000619967 314 ntBASIC3.23□□□□□ -1.89
CASQ1P31415 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CASQ1P31415 AC243312.2-201ENST00000623340 601 ntBASIC3.23□□□□□ -1.89
CASQ1P31415 AC092608.3-201ENST00000625017 386 ntBASIC3.23□□□□□ -1.89
CASQ1P31415 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.23□□□□□ -1.89
CASQ1P31415 AL161431.1-201ENST00000618966 4205 ntBASIC3.23□□□□□ -1.89
CASQ1P31415 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.23□□□□□ -1.89
CASQ1P31415 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.23□□□□□ -1.89
CASQ1P31415 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.22□□□□□ -1.89
CASQ1P31415 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CASQ1P31415 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
CASQ1P31415 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
CASQ1P31415 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CASQ1P31415 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CASQ1P31415 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CASQ1P31415 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.22□□□□□ -1.89
CASQ1P31415 RNU6-1151P-201ENST00000384684 107 ntBASIC3.22□□□□□ -1.89
CASQ1P31415 AL139095.1-201ENST00000404326 391 ntBASIC3.22□□□□□ -1.89
CASQ1P31415 HSFY4P-201ENST00000415994 1181 ntBASIC3.22□□□□□ -1.89
CASQ1P31415 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.22□□□□□ -1.89
CASQ1P31415 AL353678.1-201ENST00000422735 741 ntBASIC3.22□□□□□ -1.89
CASQ1P31415 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.22□□□□□ -1.89
CASQ1P31415 AC079780.1-201ENST00000428259 207 ntBASIC3.22□□□□□ -1.89
CASQ1P31415 BRWD1P3-201ENST00000428816 390 ntBASIC3.22□□□□□ -1.89
CASQ1P31415 RPL36AP6-201ENST00000435770 321 ntBASIC3.22□□□□□ -1.89
CASQ1P31415 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms