Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXC8P31273 AP001269.3-201ENST00000588718 329 ntBASIC4.02□□□□□ -1.77
HOXC8P31273 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.02□□□□□ -1.77
HOXC8P31273 TUSC7.1-201ENST00000610969 165 ntBASIC4.02□□□□□ -1.77
HOXC8P31273 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HOXC8P31273 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.02□□□□□ -1.77
HOXC8P31273 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
HOXC8P31273 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HOXC8P31273 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HOXC8P31273 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.02□□□□□ -1.77
HOXC8P31273 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
HOXC8P31273 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
HOXC8P31273 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HOXC8P31273 ZNF37BP-203ENST00000452306 1352 ntBASIC4.02□□□□□ -1.77
HOXC8P31273 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXC8P31273 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
HOXC8P31273 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HOXC8P31273 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.01□□□□□ -1.77
HOXC8P31273 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HOXC8P31273 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXC8P31273 SNORA40.2-201ENST00000390847 128 ntBASIC4.01□□□□□ -1.77
HOXC8P31273 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.01□□□□□ -1.77
HOXC8P31273 AL590084.1-201ENST00000407885 387 ntBASIC4.01□□□□□ -1.77
HOXC8P31273 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.01□□□□□ -1.77
HOXC8P31273 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC4.01□□□□□ -1.77
HOXC8P31273 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.01□□□□□ -1.77
HOXC8P31273 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.01□□□□□ -1.77
HOXC8P31273 ELOCP18-201ENST00000434209 337 ntBASIC4.01□□□□□ -1.77
HOXC8P31273 RPL21P112-201ENST00000434403 463 ntBASIC4.01□□□□□ -1.77
HOXC8P31273 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.01□□□□□ -1.77
HOXC8P31273 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
HOXC8P31273 AC104073.1-201ENST00000451988 151 ntBASIC4.01□□□□□ -1.77
HOXC8P31273 NECAP1P2-201ENST00000455668 727 ntBASIC4.01□□□□□ -1.77
HOXC8P31273 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.01□□□□□ -1.77
HOXC8P31273 AC013828.1-201ENST00000481845 158 ntBASIC4.01□□□□□ -1.77
HOXC8P31273 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.01□□□□□ -1.77
HOXC8P31273 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.01□□□□□ -1.77
HOXC8P31273 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.01□□□□□ -1.77
HOXC8P31273 AC118465.1-201ENST00000513820 1271 ntBASIC4.01□□□□□ -1.77
HOXC8P31273 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.01□□□□□ -1.77
HOXC8P31273 SNORA70.18-201ENST00000516696 98 ntBASIC4.01□□□□□ -1.77
HOXC8P31273 AP000790.1-201ENST00000528891 737 ntBASIC4.01□□□□□ -1.77
HOXC8P31273 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.01□□□□□ -1.77
HOXC8P31273 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.01□□□□□ -1.77
HOXC8P31273 AC008011.1-201ENST00000545989 227 ntBASIC4.01□□□□□ -1.77
HOXC8P31273 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.01□□□□□ -1.77
HOXC8P31273 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
HOXC8P31273 AC010928.3-201ENST00000587712 541 ntBASIC4.01□□□□□ -1.77
HOXC8P31273 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.01□□□□□ -1.77
HOXC8P31273 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
HOXC8P31273 AL354976.1-201ENST00000613843 387 ntBASIC4.01□□□□□ -1.77
HOXC8P31273 AC090116.1-201ENST00000615679 446 ntBASIC4.01□□□□□ -1.77
HOXC8P31273 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.01□□□□□ -1.77
HOXC8P31273 AL355365.1-201ENST00000616480 294 ntBASIC4.01□□□□□ -1.77
HOXC8P31273 AC069209.1-201ENST00000619282 651 ntBASIC4.01□□□□□ -1.77
HOXC8P31273 RMST_9.1-201ENST00000619945 193 ntBASIC4.01□□□□□ -1.77
HOXC8P31273 AC026422.1-201ENST00000623961 452 ntBASIC4.01□□□□□ -1.77
HOXC8P31273 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.01□□□□□ -1.77
HOXC8P31273 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXC8P31273 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.01□□□□□ -1.77
HOXC8P31273 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXC8P31273 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXC8P31273 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXC8P31273 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXC8P31273 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HOXC8P31273 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4□□□□□ -1.77
HOXC8P31273 AC130650.2-201ENST00000618736 2403 ntBASIC4□□□□□ -1.77
HOXC8P31273 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HOXC8P31273 AC007685.1-201ENST00000329806 452 ntBASIC4□□□□□ -1.77
HOXC8P31273 NACA3P-201ENST00000359690 648 ntBASIC4□□□□□ -1.77
HOXC8P31273 Y_RNA.169-201ENST00000363745 96 ntBASIC4□□□□□ -1.77
HOXC8P31273 RNA5SP189-201ENST00000364920 115 ntBASIC4□□□□□ -1.77
HOXC8P31273 RNU6-413P-201ENST00000384115 107 ntBASIC4□□□□□ -1.77
HOXC8P31273 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4□□□□□ -1.77
HOXC8P31273 ERHP2-201ENST00000402323 299 ntBASIC4□□□□□ -1.77
HOXC8P31273 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4□□□□□ -1.77
HOXC8P31273 AC244098.2-201ENST00000422068 99 ntBASIC4□□□□□ -1.77
HOXC8P31273 SDCBPP2-201ENST00000424643 885 ntBASIC4□□□□□ -1.77
HOXC8P31273 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4□□□□□ -1.77
HOXC8P31273 AL035410.1-201ENST00000427409 427 ntBASIC4□□□□□ -1.77
HOXC8P31273 LAMTOR3P1-201ENST00000428620 370 ntBASIC4□□□□□ -1.77
HOXC8P31273 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4□□□□□ -1.77
HOXC8P31273 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4□□□□□ -1.77
HOXC8P31273 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4□□□□□ -1.77
HOXC8P31273 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4□□□□□ -1.77
HOXC8P31273 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4□□□□□ -1.77
HOXC8P31273 RPS4XP10-201ENST00000465034 731 ntBASIC4□□□□□ -1.77
HOXC8P31273 RPS6P4-201ENST00000494693 758 ntBASIC4□□□□□ -1.77
HOXC8P31273 KLRA1P-201ENST00000503499 986 ntBASIC4□□□□□ -1.77
HOXC8P31273 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
HOXC8P31273 AC113347.3-201ENST00000509113 148 ntBASIC4□□□□□ -1.77
HOXC8P31273 AC005921.1-201ENST00000510589 286 ntBASIC4□□□□□ -1.77
HOXC8P31273 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4□□□□□ -1.77
HOXC8P31273 SNORA48.10-201ENST00000516965 160 ntBASIC4□□□□□ -1.77
HOXC8P31273 SNORA70.24-201ENST00000517233 118 ntBASIC4□□□□□ -1.77
HOXC8P31273 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4□□□□□ -1.77
HOXC8P31273 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4□□□□□ -1.77
HOXC8P31273 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4□□□□□ -1.77
HOXC8P31273 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4□□□□□ -1.77
HOXC8P31273 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms