Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC087468.1-201ENST00000604365 630 ntBASIC2.8□□□□□ -1.96
COL4A5P29400 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.8□□□□□ -1.96
COL4A5P29400 AC103710.2-201ENST00000609912 942 ntBASIC2.8□□□□□ -1.96
COL4A5P29400 MIR6845-201ENST00000613182 61 ntBASIC2.8□□□□□ -1.96
COL4A5P29400 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.8□□□□□ -1.96
COL4A5P29400 AL353997.5-201ENST00000618886 171 ntBASIC2.8□□□□□ -1.96
COL4A5P29400 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.8□□□□□ -1.96
COL4A5P29400 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
COL4A5P29400 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
COL4A5P29400 Z99496.1-201ENST00000469424 1477 ntBASIC2.8□□□□□ -1.96
COL4A5P29400 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
COL4A5P29400 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC2.79□□□□□ -1.96
COL4A5P29400 RNU1-91P-201ENST00000364746 163 ntBASIC2.79□□□□□ -1.96
COL4A5P29400 RNU6-673P-201ENST00000365084 104 ntBASIC2.79□□□□□ -1.96
COL4A5P29400 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.79□□□□□ -1.96
COL4A5P29400 AC019155.1-201ENST00000382242 574 ntBASIC2.79□□□□□ -1.96
COL4A5P29400 U8.13-201ENST00000390842 128 ntBASIC2.79□□□□□ -1.96
COL4A5P29400 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
COL4A5P29400 PTP4A1P7-201ENST00000423476 514 ntBASIC2.79□□□□□ -1.96
COL4A5P29400 MTCO2P17-201ENST00000424336 677 ntBASIC2.79□□□□□ -1.96
COL4A5P29400 AC009414.1-201ENST00000427200 443 ntBASIC2.79□□□□□ -1.96
COL4A5P29400 AL606490.7-201ENST00000433136 191 ntBASIC2.79□□□□□ -1.96
COL4A5P29400 RPL7P52-201ENST00000449200 742 ntBASIC2.79□□□□□ -1.96
COL4A5P29400 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC2.79□□□□□ -1.96
COL4A5P29400 HSPE1P22-201ENST00000456856 327 ntBASIC2.79□□□□□ -1.96
COL4A5P29400 OR5BN1P-201ENST00000532955 829 ntBASIC2.79□□□□□ -1.96
COL4A5P29400 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.79□□□□□ -1.96
COL4A5P29400 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.79□□□□□ -1.96
COL4A5P29400 AC104237.2-201ENST00000612456 443 ntBASIC2.79□□□□□ -1.96
COL4A5P29400 AC107871.2-201ENST00000612894 502 ntBASIC2.79□□□□□ -1.96
COL4A5P29400 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC2.79□□□□□ -1.96
COL4A5P29400 AC005539.1-201ENST00000443768 1479 ntBASIC2.79□□□□□ -1.96
COL4A5P29400 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC2.79□□□□□ -1.96
COL4A5P29400 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC2.79□□□□□ -1.96
COL4A5P29400 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
COL4A5P29400 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
COL4A5P29400 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.79□□□□□ -1.96
COL4A5P29400 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.79□□□□□ -1.96
COL4A5P29400 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
COL4A5P29400 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC2.79□□□□□ -1.96
COL4A5P29400 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.79□□□□□ -1.96
COL4A5P29400 AC011037.1-201ENST00000483964 558 ntBASIC2.79□□□□□ -1.96
COL4A5P29400 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
COL4A5P29400 AC104090.1-201ENST00000506341 1171 ntBASIC2.79□□□□□ -1.96
COL4A5P29400 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC2.79□□□□□ -1.96
COL4A5P29400 CD24P2-201ENST00000565486 219 ntBASIC2.79□□□□□ -1.96
COL4A5P29400 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.79□□□□□ -1.96
COL4A5P29400 MIR4644-201ENST00000579929 84 ntBASIC2.79□□□□□ -1.96
COL4A5P29400 OR4K7P-201ENST00000580232 945 ntBASIC2.79□□□□□ -1.96
COL4A5P29400 AP000942.3-201ENST00000603702 160 ntBASIC2.79□□□□□ -1.96
COL4A5P29400 AC067747.1-201ENST00000608026 250 ntBASIC2.79□□□□□ -1.96
COL4A5P29400 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
COL4A5P29400 CUL1P1-201ENST00000509510 2425 ntBASIC2.79□□□□□ -1.96
COL4A5P29400 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
COL4A5P29400 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
COL4A5P29400 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.78□□□□□ -1.96
COL4A5P29400 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
COL4A5P29400 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC2.78□□□□□ -1.96
COL4A5P29400 SNORA67.3-201ENST00000384366 140 ntBASIC2.78□□□□□ -1.96
COL4A5P29400 MIR489-201ENST00000384923 84 ntBASIC2.78□□□□□ -1.96
COL4A5P29400 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
COL4A5P29400 Y_RNA.595-201ENST00000410403 105 ntBASIC2.78□□□□□ -1.96
COL4A5P29400 MORF4L1P6-201ENST00000418771 268 ntBASIC2.78□□□□□ -1.96
COL4A5P29400 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.78□□□□□ -1.96
COL4A5P29400 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC2.78□□□□□ -1.96
COL4A5P29400 RNU7-170P-201ENST00000459303 61 ntBASIC2.78□□□□□ -1.96
COL4A5P29400 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC2.78□□□□□ -1.96
COL4A5P29400 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.78□□□□□ -1.96
COL4A5P29400 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.78□□□□□ -1.96
COL4A5P29400 OR7K1P-201ENST00000546439 926 ntBASIC2.78□□□□□ -1.96
COL4A5P29400 AC055876.1-202ENST00000567053 138 ntBASIC2.78□□□□□ -1.96
COL4A5P29400 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.78□□□□□ -1.96
COL4A5P29400 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC2.78□□□□□ -1.96
COL4A5P29400 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.78□□□□□ -1.96
COL4A5P29400 VN1R81P-201ENST00000602085 372 ntBASIC2.78□□□□□ -1.96
COL4A5P29400 AC012119.1-201ENST00000603184 222 ntBASIC2.78□□□□□ -1.96
COL4A5P29400 AC023813.4-201ENST00000607580 580 ntBASIC2.78□□□□□ -1.96
COL4A5P29400 AC009570.1-201ENST00000609599 745 ntBASIC2.78□□□□□ -1.96
COL4A5P29400 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.78□□□□□ -1.96
COL4A5P29400 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
COL4A5P29400 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
COL4A5P29400 AL450326.2-201ENST00000421913 1962 ntBASIC2.78□□□□□ -1.96
COL4A5P29400 NSRP1P1-201ENST00000444067 1693 ntBASIC2.78□□□□□ -1.97
COL4A5P29400 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.77□□□□□ -1.97
COL4A5P29400 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.77□□□□□ -1.97
COL4A5P29400 AL512646.1-201ENST00000269395 1077 ntBASIC2.77□□□□□ -1.97
COL4A5P29400 RNA5SP88-201ENST00000365560 109 ntBASIC2.77□□□□□ -1.97
COL4A5P29400 RNU6-167P-201ENST00000384292 106 ntBASIC2.77□□□□□ -1.97
COL4A5P29400 RNU2-2P-201ENST00000410396 191 ntBASIC2.77□□□□□ -1.97
COL4A5P29400 AC243772.1-201ENST00000451620 410 ntBASIC2.77□□□□□ -1.97
COL4A5P29400 AC106872.2-201ENST00000494303 480 ntBASIC2.77□□□□□ -1.97
COL4A5P29400 NIPA2P2-201ENST00000496376 1083 ntBASIC2.77□□□□□ -1.97
COL4A5P29400 AP000926.3-201ENST00000497201 299 ntBASIC2.77□□□□□ -1.97
COL4A5P29400 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.77□□□□□ -1.97
COL4A5P29400 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC2.77□□□□□ -1.97
COL4A5P29400 MTCYBP20-201ENST00000524239 1129 ntBASIC2.77□□□□□ -1.97
COL4A5P29400 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC2.77□□□□□ -1.97
COL4A5P29400 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
COL4A5P29400 SNRPGP18-201ENST00000553000 214 ntBASIC2.77□□□□□ -1.97
COL4A5P29400 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms