Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 RPS27AP13-201ENST00000498403 237 ntBASIC6.07□□□□□ -1.44
RXRBP28702 RNA5SP216-201ENST00000516111 123 ntBASIC6.07□□□□□ -1.44
RXRBP28702 Y_RNA.719-201ENST00000517156 106 ntBASIC6.07□□□□□ -1.44
RXRBP28702 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC6.07□□□□□ -1.44
RXRBP28702 AC138832.1-201ENST00000522871 556 ntBASIC6.07□□□□□ -1.44
RXRBP28702 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC6.07□□□□□ -1.44
RXRBP28702 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC6.07□□□□□ -1.44
RXRBP28702 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC6.07□□□□□ -1.44
RXRBP28702 NRBF2P1-201ENST00000587407 859 ntBASIC6.07□□□□□ -1.44
RXRBP28702 AC006504.6-201ENST00000590142 199 ntBASIC6.07□□□□□ -1.44
RXRBP28702 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6.07□□□□□ -1.44
RXRBP28702 AC113403.1-201ENST00000604910 193 ntBASIC6.07□□□□□ -1.44
RXRBP28702 AC124303.1-201ENST00000605703 360 ntBASIC6.07□□□□□ -1.44
RXRBP28702 AC097468.3-201ENST00000607956 456 ntBASIC6.07□□□□□ -1.44
RXRBP28702 AC068722.2-201ENST00000618734 544 ntBASIC6.07□□□□□ -1.44
RXRBP28702 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC6.07□□□□□ -1.44
RXRBP28702 AC134503.1-201ENST00000633048 54 ntBASIC6.07□□□□□ -1.44
RXRBP28702 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC6.07□□□□□ -1.44
RXRBP28702 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RXRBP28702 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.07□□□□□ -1.44
RXRBP28702 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RXRBP28702 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
RXRBP28702 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
RXRBP28702 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
RXRBP28702 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RXRBP28702 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RXRBP28702 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RXRBP28702 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
RXRBP28702 EEF1A1P42-201ENST00000613436 1331 ntBASIC6.06□□□□□ -1.44
RXRBP28702 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RXRBP28702 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC6.06□□□□□ -1.44
RXRBP28702 RNA5SP124-201ENST00000362739 110 ntBASIC6.06□□□□□ -1.44
RXRBP28702 RNU6-666P-201ENST00000363499 107 ntBASIC6.06□□□□□ -1.44
RXRBP28702 Y_RNA.146-201ENST00000363549 102 ntBASIC6.06□□□□□ -1.44
RXRBP28702 RNA5SP22-201ENST00000365393 109 ntBASIC6.06□□□□□ -1.44
RXRBP28702 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC6.06□□□□□ -1.44
RXRBP28702 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
RXRBP28702 SNORA5.1-201ENST00000384275 131 ntBASIC6.06□□□□□ -1.44
RXRBP28702 PTMAP5-201ENST00000393073 333 ntBASIC6.06□□□□□ -1.44
RXRBP28702 RAB9AP3-201ENST00000412737 573 ntBASIC6.06□□□□□ -1.44
RXRBP28702 AL589872.1-201ENST00000426602 288 ntBASIC6.06□□□□□ -1.44
RXRBP28702 RPL31P35-201ENST00000431058 377 ntBASIC6.06□□□□□ -1.44
RXRBP28702 AL365400.1-201ENST00000431854 640 ntBASIC6.06□□□□□ -1.44
RXRBP28702 BRK1P2-201ENST00000442875 223 ntBASIC6.06□□□□□ -1.44
RXRBP28702 RAB9AP1-201ENST00000449393 573 ntBASIC6.06□□□□□ -1.44
RXRBP28702 AC008481.1-201ENST00000463278 396 ntBASIC6.06□□□□□ -1.44
RXRBP28702 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC6.06□□□□□ -1.44
RXRBP28702 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC6.06□□□□□ -1.44
RXRBP28702 RN7SKP116-201ENST00000516902 319 ntBASIC6.06□□□□□ -1.44
RXRBP28702 RNU6-835P-201ENST00000516974 104 ntBASIC6.06□□□□□ -1.44
RXRBP28702 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC6.06□□□□□ -1.44
RXRBP28702 ELOCP31-201ENST00000540463 467 ntBASIC6.06□□□□□ -1.44
RXRBP28702 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC6.06□□□□□ -1.44
RXRBP28702 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC6.06□□□□□ -1.44
RXRBP28702 AC093249.1-201ENST00000567049 203 ntBASIC6.06□□□□□ -1.44
RXRBP28702 MIR5685-201ENST00000579080 79 ntBASIC6.06□□□□□ -1.44
RXRBP28702 MIR4513-201ENST00000581077 86 ntBASIC6.06□□□□□ -1.44
RXRBP28702 MIR3682-201ENST00000581338 84 ntBASIC6.06□□□□□ -1.44
RXRBP28702 MIR544B-201ENST00000582372 78 ntBASIC6.06□□□□□ -1.44
RXRBP28702 AC245014.2-201ENST00000603689 287 ntBASIC6.06□□□□□ -1.44
RXRBP28702 AC113139.1-201ENST00000605049 239 ntBASIC6.06□□□□□ -1.44
RXRBP28702 AC246785.4-201ENST00000605374 287 ntBASIC6.06□□□□□ -1.44
RXRBP28702 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC6.06□□□□□ -1.44
RXRBP28702 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC6.06□□□□□ -1.44
RXRBP28702 TTK-211ENST00000627129 240 ntTSL 5 BASIC6.06□□□□□ -1.44
RXRBP28702 TPTEP1-208ENST00000636884 213 ntBASIC6.06□□□□□ -1.44
RXRBP28702 AC066616.2-201ENST00000559334 1481 ntBASIC6.06□□□□□ -1.44
RXRBP28702 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
RXRBP28702 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RXRBP28702 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
RXRBP28702 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.05□□□□□ -1.44
RXRBP28702 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RXRBP28702 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
RXRBP28702 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC6.05□□□□□ -1.44
RXRBP28702 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RXRBP28702 RNU6-492P-201ENST00000363035 104 ntBASIC6.05□□□□□ -1.44
RXRBP28702 Y_RNA.157-201ENST00000363638 102 ntBASIC6.05□□□□□ -1.44
RXRBP28702 RNU6-1322P-201ENST00000364309 107 ntBASIC6.05□□□□□ -1.44
RXRBP28702 Y_RNA.474-201ENST00000384341 102 ntBASIC6.05□□□□□ -1.44
RXRBP28702 RNU6-729P-201ENST00000384399 107 ntBASIC6.05□□□□□ -1.44
RXRBP28702 MIR218-2-201ENST00000385006 110 ntBASIC6.05□□□□□ -1.44
RXRBP28702 MT-TR-201ENST00000387439 65 ntBASIC6.05□□□□□ -1.44
RXRBP28702 RPA3-203ENST00000401447 414 ntTSL 3 BASIC6.05□□□□□ -1.44
RXRBP28702 AL590704.1-201ENST00000402856 794 ntBASIC6.05□□□□□ -1.44
RXRBP28702 RPL21P65-201ENST00000406094 466 ntBASIC6.05□□□□□ -1.44
RXRBP28702 AL354719.1-201ENST00000406535 843 ntBASIC6.05□□□□□ -1.44
RXRBP28702 MIR548P-201ENST00000408336 84 ntBASIC6.05□□□□□ -1.44
RXRBP28702 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC6.05□□□□□ -1.44
RXRBP28702 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.05□□□□□ -1.44
RXRBP28702 MTCO3P46-201ENST00000425787 232 ntBASIC6.05□□□□□ -1.44
RXRBP28702 AL451139.1-201ENST00000434718 346 ntBASIC6.05□□□□□ -1.44
RXRBP28702 AC099670.2-201ENST00000435130 321 ntBASIC6.05□□□□□ -1.44
RXRBP28702 HMGB3P12-201ENST00000438745 556 ntBASIC6.05□□□□□ -1.44
RXRBP28702 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC6.05□□□□□ -1.44
RXRBP28702 MTND1P12-201ENST00000455231 147 ntBASIC6.05□□□□□ -1.44
RXRBP28702 AC053481.1-201ENST00000467217 306 ntBASIC6.05□□□□□ -1.44
RXRBP28702 AC103851.1-201ENST00000506833 274 ntBASIC6.05□□□□□ -1.44
RXRBP28702 AC093809.1-201ENST00000509155 340 ntBASIC6.05□□□□□ -1.44
RXRBP28702 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC6.05□□□□□ -1.44
RXRBP28702 MTND5P4-201ENST00000514978 288 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms