Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.3□□□□□ -2.04
HLA-DMBP28068 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
HLA-DMBP28068 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.3□□□□□ -2.04
HLA-DMBP28068 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.3□□□□□ -2.04
HLA-DMBP28068 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC2.3□□□□□ -2.04
HLA-DMBP28068 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.3□□□□□ -2.04
HLA-DMBP28068 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.3□□□□□ -2.04
HLA-DMBP28068 AC099506.2-201ENST00000623074 221 ntBASIC2.3□□□□□ -2.04
HLA-DMBP28068 AC018692.3-201ENST00000623929 123 ntBASIC2.3□□□□□ -2.04
HLA-DMBP28068 AC026422.1-201ENST00000623961 452 ntBASIC2.3□□□□□ -2.04
HLA-DMBP28068 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.3□□□□□ -2.04
HLA-DMBP28068 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
HLA-DMBP28068 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.3□□□□□ -2.04
HLA-DMBP28068 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
HLA-DMBP28068 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
HLA-DMBP28068 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
HLA-DMBP28068 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
HLA-DMBP28068 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
HLA-DMBP28068 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
HLA-DMBP28068 ZNF833P-201ENST00000424938 1494 ntBASIC2.29□□□□□ -2.04
HLA-DMBP28068 MAPK10-266ENST00000641066 6555 ntBASIC2.29□□□□□ -2.04
HLA-DMBP28068 AC073325.2-201ENST00000339545 159 ntBASIC2.29□□□□□ -2.04
HLA-DMBP28068 SNORD15B-201ENST00000384714 146 ntBASIC2.29□□□□□ -2.04
HLA-DMBP28068 MIR142-201ENST00000384835 87 ntBASIC2.29□□□□□ -2.04
HLA-DMBP28068 SNORA48.5-201ENST00000391143 135 ntBASIC2.29□□□□□ -2.04
HLA-DMBP28068 RPL21P75-201ENST00000396599 483 ntBASIC2.29□□□□□ -2.04
HLA-DMBP28068 RPL21P28-201ENST00000401418 483 ntBASIC2.29□□□□□ -2.04
HLA-DMBP28068 AL592114.1-201ENST00000403842 483 ntBASIC2.29□□□□□ -2.04
HLA-DMBP28068 GSTA8P-201ENST00000404253 637 ntBASIC2.29□□□□□ -2.04
HLA-DMBP28068 RNA5SP274-201ENST00000410484 108 ntBASIC2.29□□□□□ -2.04
HLA-DMBP28068 OFD1P18Y-201ENST00000420889 959 ntBASIC2.29□□□□□ -2.04
HLA-DMBP28068 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.29□□□□□ -2.04
HLA-DMBP28068 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.29□□□□□ -2.04
HLA-DMBP28068 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.29□□□□□ -2.04
HLA-DMBP28068 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.29□□□□□ -2.04
HLA-DMBP28068 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.29□□□□□ -2.04
HLA-DMBP28068 YWHAZP8-201ENST00000436935 731 ntBASIC2.29□□□□□ -2.04
HLA-DMBP28068 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC2.29□□□□□ -2.04
HLA-DMBP28068 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.29□□□□□ -2.04
HLA-DMBP28068 AL034418.1-201ENST00000448675 860 ntBASIC2.29□□□□□ -2.04
HLA-DMBP28068 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.29□□□□□ -2.04
HLA-DMBP28068 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.29□□□□□ -2.04
HLA-DMBP28068 AL035407.2-201ENST00000454090 378 ntBASIC2.29□□□□□ -2.04
HLA-DMBP28068 AP001992.1-205ENST00000462248 379 ntBASIC2.29□□□□□ -2.04
HLA-DMBP28068 RPL21P39-201ENST00000463605 483 ntBASIC2.29□□□□□ -2.04
HLA-DMBP28068 AC011979.1-201ENST00000472300 483 ntBASIC2.29□□□□□ -2.04
HLA-DMBP28068 RPL21P93-201ENST00000480465 489 ntBASIC2.29□□□□□ -2.04
HLA-DMBP28068 AC233702.1-201ENST00000482905 502 ntBASIC2.29□□□□□ -2.04
HLA-DMBP28068 AC087190.1-201ENST00000484462 480 ntBASIC2.29□□□□□ -2.04
HLA-DMBP28068 AC068724.1-201ENST00000487100 792 ntBASIC2.29□□□□□ -2.04
HLA-DMBP28068 AC093591.1-201ENST00000491435 481 ntBASIC2.29□□□□□ -2.04
HLA-DMBP28068 RPL21P16-201ENST00000495531 483 ntBASIC2.29□□□□□ -2.04
HLA-DMBP28068 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
HLA-DMBP28068 RN7SKP43-201ENST00000516173 320 ntBASIC2.29□□□□□ -2.04
HLA-DMBP28068 RNU6-56P-201ENST00000516986 93 ntBASIC2.29□□□□□ -2.04
HLA-DMBP28068 C1DP5-201ENST00000525775 383 ntBASIC2.29□□□□□ -2.04
HLA-DMBP28068 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.29□□□□□ -2.04
HLA-DMBP28068 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.29□□□□□ -2.04
HLA-DMBP28068 SETP2-201ENST00000553886 926 ntBASIC2.29□□□□□ -2.04
HLA-DMBP28068 AL442163.2-201ENST00000553912 710 ntBASIC2.29□□□□□ -2.04
HLA-DMBP28068 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.29□□□□□ -2.04
HLA-DMBP28068 AC090312.2-201ENST00000582687 378 ntBASIC2.29□□□□□ -2.04
HLA-DMBP28068 AC083760.1-201ENST00000589621 670 ntBASIC2.29□□□□□ -2.04
HLA-DMBP28068 AC103881.1-201ENST00000603476 538 ntBASIC2.29□□□□□ -2.04
HLA-DMBP28068 AL009028.1-201ENST00000604895 802 ntBASIC2.29□□□□□ -2.04
HLA-DMBP28068 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.29□□□□□ -2.04
HLA-DMBP28068 AC069234.5-201ENST00000611056 416 ntBASIC2.29□□□□□ -2.04
HLA-DMBP28068 AC138932.5-201ENST00000617759 563 ntBASIC2.29□□□□□ -2.04
HLA-DMBP28068 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.29□□□□□ -2.04
HLA-DMBP28068 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.29□□□□□ -2.04
HLA-DMBP28068 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
HLA-DMBP28068 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
HLA-DMBP28068 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
HLA-DMBP28068 OR5BR1P-201ENST00000524992 1330 ntBASIC2.28□□□□□ -2.04
HLA-DMBP28068 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.28□□□□□ -2.04
HLA-DMBP28068 MIR422A-201ENST00000362286 90 ntBASIC2.28□□□□□ -2.04
HLA-DMBP28068 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.28□□□□□ -2.04
HLA-DMBP28068 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
HLA-DMBP28068 DSTNP4-201ENST00000399472 474 ntBASIC2.28□□□□□ -2.04
HLA-DMBP28068 AC096664.2-201ENST00000411843 406 ntBASIC2.28□□□□□ -2.04
HLA-DMBP28068 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.28□□□□□ -2.04
HLA-DMBP28068 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.28□□□□□ -2.04
HLA-DMBP28068 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.28□□□□□ -2.04
HLA-DMBP28068 AL390023.1-201ENST00000428836 262 ntBASIC2.28□□□□□ -2.04
HLA-DMBP28068 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.28□□□□□ -2.04
HLA-DMBP28068 AC109583.1-201ENST00000432156 268 ntBASIC2.28□□□□□ -2.04
HLA-DMBP28068 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.28□□□□□ -2.04
HLA-DMBP28068 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.28□□□□□ -2.04
HLA-DMBP28068 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC2.28□□□□□ -2.04
HLA-DMBP28068 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.28□□□□□ -2.04
HLA-DMBP28068 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.28□□□□□ -2.04
HLA-DMBP28068 AC010285.1-201ENST00000470580 392 ntBASIC2.28□□□□□ -2.04
HLA-DMBP28068 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.28□□□□□ -2.04
HLA-DMBP28068 AC087879.1-201ENST00000474343 374 ntBASIC2.28□□□□□ -2.04
HLA-DMBP28068 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.28□□□□□ -2.04
HLA-DMBP28068 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.28□□□□□ -2.04
HLA-DMBP28068 AC006445.1-201ENST00000491925 405 ntBASIC2.28□□□□□ -2.04
HLA-DMBP28068 KLHL2P1-201ENST00000508691 521 ntBASIC2.28□□□□□ -2.04
HLA-DMBP28068 AC098799.2-201ENST00000509466 868 ntBASIC2.28□□□□□ -2.04
HLA-DMBP28068 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms