Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.4□□□□□ -2.03
HMGA1P17096 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.4□□□□□ -2.03
HMGA1P17096 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.4□□□□□ -2.03
HMGA1P17096 DPH3P2-201ENST00000422618 250 ntBASIC2.4□□□□□ -2.03
HMGA1P17096 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.4□□□□□ -2.03
HMGA1P17096 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.4□□□□□ -2.03
HMGA1P17096 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.4□□□□□ -2.03
HMGA1P17096 MTND4LP12-201ENST00000448237 295 ntBASIC2.4□□□□□ -2.03
HMGA1P17096 AP001317.1-201ENST00000531194 960 ntBASIC2.4□□□□□ -2.03
HMGA1P17096 SNRPGP18-201ENST00000553000 214 ntBASIC2.4□□□□□ -2.03
HMGA1P17096 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.4□□□□□ -2.03
HMGA1P17096 AC026464.5-201ENST00000562497 722 ntBASIC2.4□□□□□ -2.03
HMGA1P17096 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.4□□□□□ -2.03
HMGA1P17096 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.4□□□□□ -2.03
HMGA1P17096 MIR3670-2-201ENST00000582974 65 ntBASIC2.4□□□□□ -2.03
HMGA1P17096 MIR3670-1-201ENST00000584160 65 ntBASIC2.4□□□□□ -2.03
HMGA1P17096 MIR3670-3-201ENST00000584855 65 ntBASIC2.4□□□□□ -2.03
HMGA1P17096 MIR3670-4-201ENST00000612260 65 ntBASIC2.4□□□□□ -2.03
HMGA1P17096 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.03
HMGA1P17096 VN1R7P-201ENST00000619242 903 ntBASIC2.4□□□□□ -2.03
HMGA1P17096 XIST_intron.1-201ENST00000619444 68 ntBASIC2.4□□□□□ -2.03
HMGA1P17096 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
HMGA1P17096 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
HMGA1P17096 SEPT7P7-201ENST00000420492 1301 ntBASIC2.4□□□□□ -2.03
HMGA1P17096 AC114546.3-201ENST00000623582 1734 ntBASIC2.39□□□□□ -2.03
HMGA1P17096 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
HMGA1P17096 AC091152.2-201ENST00000591628 2569 ntBASIC2.39□□□□□ -2.03
HMGA1P17096 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.39□□□□□ -2.03
HMGA1P17096 MIR6073-201ENST00000352083 89 ntBASIC2.39□□□□□ -2.03
HMGA1P17096 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HMGA1P17096 RPS24P8-201ENST00000431490 402 ntBASIC2.39□□□□□ -2.03
HMGA1P17096 RPS27P5-201ENST00000444247 244 ntBASIC2.39□□□□□ -2.03
HMGA1P17096 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.39□□□□□ -2.03
HMGA1P17096 snoU13.15-201ENST00000459407 104 ntBASIC2.39□□□□□ -2.03
HMGA1P17096 AC098583.1-201ENST00000480875 255 ntBASIC2.39□□□□□ -2.03
HMGA1P17096 AC112673.1-201ENST00000513168 575 ntBASIC2.39□□□□□ -2.03
HMGA1P17096 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.39□□□□□ -2.03
HMGA1P17096 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.39□□□□□ -2.03
HMGA1P17096 SYT14P1-202ENST00000600441 1448 ntBASIC2.39□□□□□ -2.03
HMGA1P17096 AP001148.1-201ENST00000624124 2359 ntBASIC2.39□□□□□ -2.03
HMGA1P17096 AC009487.4-201ENST00000624969 3585 ntBASIC2.39□□□□□ -2.03
HMGA1P17096 Z99496.1-201ENST00000469424 1477 ntBASIC2.39□□□□□ -2.03
HMGA1P17096 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HMGA1P17096 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
HMGA1P17096 ATG3P1-201ENST00000419507 911 ntBASIC2.38□□□□□ -2.03
HMGA1P17096 MTND2P16-201ENST00000419987 799 ntBASIC2.38□□□□□ -2.03
HMGA1P17096 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.38□□□□□ -2.03
HMGA1P17096 MTATP6P11-201ENST00000428071 670 ntBASIC2.38□□□□□ -2.03
HMGA1P17096 SAR1AP4-201ENST00000429225 591 ntBASIC2.38□□□□□ -2.03
HMGA1P17096 YWHAZP7-201ENST00000436906 631 ntBASIC2.38□□□□□ -2.03
HMGA1P17096 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.38□□□□□ -2.03
HMGA1P17096 AC096638.1-201ENST00000444678 216 ntBASIC2.38□□□□□ -2.03
HMGA1P17096 AL354710.1-201ENST00000453641 246 ntBASIC2.38□□□□□ -2.03
HMGA1P17096 RPS20P32-201ENST00000456044 356 ntBASIC2.38□□□□□ -2.03
HMGA1P17096 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.38□□□□□ -2.03
HMGA1P17096 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.38□□□□□ -2.03
HMGA1P17096 IGHV3-76-201ENST00000522465 295 ntBASIC2.38□□□□□ -2.03
HMGA1P17096 MTCYBP20-201ENST00000524239 1129 ntBASIC2.38□□□□□ -2.03
HMGA1P17096 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.38□□□□□ -2.03
HMGA1P17096 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.38□□□□□ -2.03
HMGA1P17096 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC2.38□□□□□ -2.03
HMGA1P17096 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.38□□□□□ -2.03
HMGA1P17096 AL160237.3-201ENST00000604114 1013 ntBASIC2.38□□□□□ -2.03
HMGA1P17096 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
HMGA1P17096 MIR6715A-201ENST00000615929 79 ntBASIC2.38□□□□□ -2.03
HMGA1P17096 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.38□□□□□ -2.03
HMGA1P17096 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC2.38□□□□□ -2.03
HMGA1P17096 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.38□□□□□ -2.03
HMGA1P17096 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HMGA1P17096 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.37□□□□□ -2.03
HMGA1P17096 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.37□□□□□ -2.03
HMGA1P17096 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
HMGA1P17096 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
HMGA1P17096 RNU1-91P-201ENST00000364746 163 ntBASIC2.37□□□□□ -2.03
HMGA1P17096 U8.8-201ENST00000365399 135 ntBASIC2.37□□□□□ -2.03
HMGA1P17096 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.37□□□□□ -2.03
HMGA1P17096 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.37□□□□□ -2.03
HMGA1P17096 AL079342.1-201ENST00000401460 267 ntBASIC2.37□□□□□ -2.03
HMGA1P17096 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.37□□□□□ -2.03
HMGA1P17096 AC233981.1-201ENST00000423224 461 ntBASIC2.37□□□□□ -2.03
HMGA1P17096 AC106901.1-201ENST00000425086 698 ntBASIC2.37□□□□□ -2.03
HMGA1P17096 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.37□□□□□ -2.03
HMGA1P17096 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HMGA1P17096 RPS27AP9-201ENST00000477681 438 ntBASIC2.37□□□□□ -2.03
HMGA1P17096 AC108860.1-201ENST00000484521 383 ntBASIC2.37□□□□□ -2.03
HMGA1P17096 RPL9P6-201ENST00000492764 598 ntBASIC2.37□□□□□ -2.03
HMGA1P17096 RPS27P27-201ENST00000498779 255 ntBASIC2.37□□□□□ -2.03
HMGA1P17096 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC2.37□□□□□ -2.03
HMGA1P17096 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.37□□□□□ -2.03
HMGA1P17096 XKRY-201ENST00000510392 1100 ntBASIC2.37□□□□□ -2.03
HMGA1P17096 AP003467.2-201ENST00000520175 319 ntBASIC2.37□□□□□ -2.03
HMGA1P17096 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.37□□□□□ -2.03
HMGA1P17096 AP000873.5-201ENST00000533906 236 ntBASIC2.37□□□□□ -2.03
HMGA1P17096 AC004486.1-201ENST00000546846 233 ntBASIC2.37□□□□□ -2.03
HMGA1P17096 AC074029.1-201ENST00000552531 1044 ntBASIC2.37□□□□□ -2.03
HMGA1P17096 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.37□□□□□ -2.03
HMGA1P17096 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.37□□□□□ -2.03
HMGA1P17096 AC105137.2-201ENST00000569073 466 ntBASIC2.37□□□□□ -2.03
HMGA1P17096 AC104984.5-201ENST00000586878 94 ntBASIC2.37□□□□□ -2.03
HMGA1P17096 MIR6766-201ENST00000622641 72 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms