Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AC093767.1-201ENST00000504523 156 ntBASIC3.65□□□□□ -1.83
HLA-DOBP13765 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.65□□□□□ -1.83
HLA-DOBP13765 CDC42P4-201ENST00000510507 563 ntBASIC3.65□□□□□ -1.83
HLA-DOBP13765 FABP5P5-201ENST00000515537 406 ntBASIC3.65□□□□□ -1.83
HLA-DOBP13765 IGKV2-38-201ENST00000517443 247 ntBASIC3.65□□□□□ -1.83
HLA-DOBP13765 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.65□□□□□ -1.83
HLA-DOBP13765 AC022861.1-201ENST00000522981 663 ntBASIC3.65□□□□□ -1.83
HLA-DOBP13765 OR5AP1P-201ENST00000529730 940 ntBASIC3.65□□□□□ -1.83
HLA-DOBP13765 AC013828.2-201ENST00000532487 235 ntBASIC3.65□□□□□ -1.83
HLA-DOBP13765 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.65□□□□□ -1.83
HLA-DOBP13765 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.65□□□□□ -1.83
HLA-DOBP13765 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.65□□□□□ -1.83
HLA-DOBP13765 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.65□□□□□ -1.83
HLA-DOBP13765 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.65□□□□□ -1.83
HLA-DOBP13765 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.65□□□□□ -1.83
HLA-DOBP13765 MIR5684-201ENST00000585074 65 ntBASIC3.65□□□□□ -1.83
HLA-DOBP13765 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.65□□□□□ -1.83
HLA-DOBP13765 AC007566.2-201ENST00000603642 413 ntBASIC3.65□□□□□ -1.83
HLA-DOBP13765 AL451044.1-201ENST00000604867 238 ntBASIC3.65□□□□□ -1.83
HLA-DOBP13765 AC092354.2-201ENST00000607786 514 ntBASIC3.65□□□□□ -1.83
HLA-DOBP13765 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.65□□□□□ -1.83
HLA-DOBP13765 LINC00901.1-201ENST00000617252 152 ntBASIC3.65□□□□□ -1.83
HLA-DOBP13765 AL445264.1-201ENST00000621719 171 ntBASIC3.65□□□□□ -1.83
HLA-DOBP13765 AC000123.2-201ENST00000623124 461 ntBASIC3.65□□□□□ -1.83
HLA-DOBP13765 AC093591.3-201ENST00000634516 308 ntBASIC3.65□□□□□ -1.83
HLA-DOBP13765 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
HLA-DOBP13765 AC010300.1-201ENST00000600671 5134 ntBASIC3.65□□□□□ -1.83
HLA-DOBP13765 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HLA-DOBP13765 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HLA-DOBP13765 AC006378.2-201ENST00000623178 2476 ntBASIC3.65□□□□□ -1.83
HLA-DOBP13765 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.65□□□□□ -1.83
HLA-DOBP13765 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
HLA-DOBP13765 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HLA-DOBP13765 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
HLA-DOBP13765 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DOBP13765 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.64□□□□□ -1.83
HLA-DOBP13765 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DOBP13765 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DOBP13765 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.64□□□□□ -1.83
HLA-DOBP13765 RPL32P3-201ENST00000359025 275 ntBASIC3.64□□□□□ -1.83
HLA-DOBP13765 RNU6-289P-201ENST00000364093 107 ntBASIC3.64□□□□□ -1.83
HLA-DOBP13765 RNU5E-5P-201ENST00000365379 116 ntBASIC3.64□□□□□ -1.83
HLA-DOBP13765 Y_RNA.359-201ENST00000365498 102 ntBASIC3.64□□□□□ -1.83
HLA-DOBP13765 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
HLA-DOBP13765 U8.14-201ENST00000390843 143 ntBASIC3.64□□□□□ -1.83
HLA-DOBP13765 ENSAP1-201ENST00000392855 326 ntBASIC3.64□□□□□ -1.83
HLA-DOBP13765 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.64□□□□□ -1.83
HLA-DOBP13765 Y_RNA.599-201ENST00000410489 109 ntBASIC3.64□□□□□ -1.83
HLA-DOBP13765 RN7SKP33-201ENST00000410942 340 ntBASIC3.64□□□□□ -1.83
HLA-DOBP13765 AC016397.1-201ENST00000412463 242 ntBASIC3.64□□□□□ -1.83
HLA-DOBP13765 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.64□□□□□ -1.83
HLA-DOBP13765 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.64□□□□□ -1.83
HLA-DOBP13765 MTCO2P5-201ENST00000422621 426 ntBASIC3.64□□□□□ -1.83
HLA-DOBP13765 AC008065.1-201ENST00000428525 348 ntBASIC3.64□□□□□ -1.83
HLA-DOBP13765 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.64□□□□□ -1.83
HLA-DOBP13765 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.64□□□□□ -1.83
HLA-DOBP13765 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.64□□□□□ -1.83
HLA-DOBP13765 MUPP-201ENST00000438111 566 ntBASIC3.64□□□□□ -1.83
HLA-DOBP13765 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.64□□□□□ -1.83
HLA-DOBP13765 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.64□□□□□ -1.83
HLA-DOBP13765 PABPC1P3-201ENST00000469174 459 ntBASIC3.64□□□□□ -1.83
HLA-DOBP13765 AC010618.1-201ENST00000469924 477 ntBASIC3.64□□□□□ -1.83
HLA-DOBP13765 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.64□□□□□ -1.83
HLA-DOBP13765 AL136126.1-201ENST00000473603 402 ntBASIC3.64□□□□□ -1.83
HLA-DOBP13765 AC026979.1-201ENST00000492525 396 ntBASIC3.64□□□□□ -1.83
HLA-DOBP13765 RPL29P14-201ENST00000495837 428 ntBASIC3.64□□□□□ -1.83
HLA-DOBP13765 PRELID3BP7-201ENST00000503606 469 ntBASIC3.64□□□□□ -1.83
HLA-DOBP13765 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.64□□□□□ -1.83
HLA-DOBP13765 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.64□□□□□ -1.83
HLA-DOBP13765 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.64□□□□□ -1.83
HLA-DOBP13765 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.64□□□□□ -1.83
HLA-DOBP13765 SNORA31.9-201ENST00000516429 84 ntBASIC3.64□□□□□ -1.83
HLA-DOBP13765 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.64□□□□□ -1.83
HLA-DOBP13765 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.64□□□□□ -1.83
HLA-DOBP13765 AC022880.1-201ENST00000534017 973 ntBASIC3.64□□□□□ -1.83
HLA-DOBP13765 OR6C73P-201ENST00000546432 358 ntBASIC3.64□□□□□ -1.83
HLA-DOBP13765 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.64□□□□□ -1.83
HLA-DOBP13765 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.64□□□□□ -1.83
HLA-DOBP13765 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.64□□□□□ -1.83
HLA-DOBP13765 MIR544B-201ENST00000582372 78 ntBASIC3.64□□□□□ -1.83
HLA-DOBP13765 MIR548AB-201ENST00000584917 84 ntBASIC3.64□□□□□ -1.83
HLA-DOBP13765 AC005771.1-201ENST00000585581 349 ntBASIC3.64□□□□□ -1.83
HLA-DOBP13765 DEFB131E-202ENST00000602581 683 ntBASIC3.64□□□□□ -1.83
HLA-DOBP13765 AC008638.3-201ENST00000603341 463 ntBASIC3.64□□□□□ -1.83
HLA-DOBP13765 AC113194.1-201ENST00000606037 500 ntBASIC3.64□□□□□ -1.83
HLA-DOBP13765 AC010857.1-201ENST00000606398 594 ntBASIC3.64□□□□□ -1.83
HLA-DOBP13765 AL513477.2-201ENST00000607858 568 ntBASIC3.64□□□□□ -1.83
HLA-DOBP13765 AL136295.6-201ENST00000610486 658 ntBASIC3.64□□□□□ -1.83
HLA-DOBP13765 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.64□□□□□ -1.83
HLA-DOBP13765 AL158196.1-201ENST00000616786 434 ntBASIC3.64□□□□□ -1.83
HLA-DOBP13765 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.64□□□□□ -1.83
HLA-DOBP13765 AL023881.1-201ENST00000621088 301 ntBASIC3.64□□□□□ -1.83
HLA-DOBP13765 AC068792.1-201ENST00000621354 417 ntBASIC3.64□□□□□ -1.83
HLA-DOBP13765 AL773545.4-201ENST00000637262 310 ntBASIC3.64□□□□□ -1.83
HLA-DOBP13765 AL513478.4-201ENST00000641636 310 ntBASIC3.64□□□□□ -1.83
HLA-DOBP13765 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DOBP13765 OR11H5P-202ENST00000641612 1325 ntBASIC3.64□□□□□ -1.83
HLA-DOBP13765 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.64□□□□□ -1.83
HLA-DOBP13765 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.64□□□□□ -1.83
HLA-DOBP13765 ASNSP1-201ENST00000518311 1939 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms