Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.4□□□□□ -2.03
VCANP13611 RNA5SP274-201ENST00000410484 108 ntBASIC2.4□□□□□ -2.03
VCANP13611 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
VCANP13611 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
VCANP13611 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.39□□□□□ -2.03
VCANP13611 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
VCANP13611 AC127526.1-201ENST00000417526 366 ntBASIC2.39□□□□□ -2.03
VCANP13611 RPL12P18-201ENST00000437175 325 ntBASIC2.39□□□□□ -2.03
VCANP13611 AL450263.2-201ENST00000439400 589 ntBASIC2.39□□□□□ -2.03
VCANP13611 MIR6895-201ENST00000613497 78 ntBASIC2.39□□□□□ -2.03
VCANP13611 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.39□□□□□ -2.03
VCANP13611 SAGE4P-201ENST00000442271 3381 ntBASIC2.39□□□□□ -2.03
VCANP13611 HMGN1P33-201ENST00000432945 451 ntBASIC2.39□□□□□ -2.03
VCANP13611 RPS29P11-201ENST00000496507 171 ntBASIC2.39□□□□□ -2.03
VCANP13611 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
VCANP13611 snoZ278.1-201ENST00000517059 112 ntBASIC2.39□□□□□ -2.03
VCANP13611 OR5D17P-201ENST00000531492 978 ntBASIC2.39□□□□□ -2.03
VCANP13611 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.39□□□□□ -2.03
VCANP13611 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.39□□□□□ -2.03
VCANP13611 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.39□□□□□ -2.03
VCANP13611 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.39□□□□□ -2.03
VCANP13611 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
VCANP13611 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
VCANP13611 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
VCANP13611 RNU6-356P-201ENST00000384140 107 ntBASIC2.38□□□□□ -2.03
VCANP13611 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.38□□□□□ -2.03
VCANP13611 AC245166.1-201ENST00000521012 253 ntBASIC2.38□□□□□ -2.03
VCANP13611 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.38□□□□□ -2.03
VCANP13611 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.38□□□□□ -2.03
VCANP13611 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.38□□□□□ -2.03
VCANP13611 CRYM-AS1-204ENST00000637983 556 ntBASIC2.38□□□□□ -2.03
VCANP13611 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
VCANP13611 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.38□□□□□ -2.03
VCANP13611 SNORD114-22-201ENST00000365423 72 ntBASIC2.38□□□□□ -2.03
VCANP13611 AL590004.2-201ENST00000404787 371 ntBASIC2.38□□□□□ -2.03
VCANP13611 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.38□□□□□ -2.03
VCANP13611 RN7SKP140-201ENST00000411196 284 ntBASIC2.38□□□□□ -2.03
VCANP13611 RPS7P9-201ENST00000414704 586 ntBASIC2.38□□□□□ -2.03
VCANP13611 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC2.38□□□□□ -2.03
VCANP13611 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
VCANP13611 AL591719.1-201ENST00000444669 744 ntBASIC2.38□□□□□ -2.03
VCANP13611 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.38□□□□□ -2.03
VCANP13611 MIR4303-201ENST00000581299 66 ntBASIC2.38□□□□□ -2.03
VCANP13611 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
VCANP13611 AC138915.3-201ENST00000562908 1389 ntBASIC2.38□□□□□ -2.03
VCANP13611 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.38□□□□□ -2.03
VCANP13611 MIR423-201ENST00000362201 94 ntBASIC2.38□□□□□ -2.03
VCANP13611 RNU6-805P-201ENST00000365643 106 ntBASIC2.38□□□□□ -2.03
VCANP13611 U8.10-201ENST00000384260 133 ntBASIC2.38□□□□□ -2.03
VCANP13611 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.38□□□□□ -2.03
VCANP13611 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.38□□□□□ -2.03
VCANP13611 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.38□□□□□ -2.03
VCANP13611 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC2.38□□□□□ -2.03
VCANP13611 ACTR6P1-201ENST00000514311 1104 ntBASIC2.38□□□□□ -2.03
VCANP13611 OR8L1P-201ENST00000534005 955 ntBASIC2.38□□□□□ -2.03
VCANP13611 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.38□□□□□ -2.03
VCANP13611 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.38□□□□□ -2.03
VCANP13611 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC2.38□□□□□ -2.03
VCANP13611 PHKBP1-201ENST00000450951 1951 ntBASIC2.38□□□□□ -2.03
VCANP13611 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.37□□□□□ -2.03
VCANP13611 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.37□□□□□ -2.03
VCANP13611 ERHP2-201ENST00000402323 299 ntBASIC2.37□□□□□ -2.03
VCANP13611 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.37□□□□□ -2.03
VCANP13611 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
VCANP13611 MTND2P29-201ENST00000438595 412 ntBASIC2.37□□□□□ -2.03
VCANP13611 MTND4LP16-201ENST00000440828 295 ntBASIC2.37□□□□□ -2.03
VCANP13611 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.37□□□□□ -2.03
VCANP13611 AL365503.1-201ENST00000605247 905 ntBASIC2.37□□□□□ -2.03
VCANP13611 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.37□□□□□ -2.03
VCANP13611 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.37□□□□□ -2.03
VCANP13611 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
VCANP13611 AL353743.4-201ENST00000422653 1547 ntBASIC2.37□□□□□ -2.03
VCANP13611 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
VCANP13611 RNU4-62P-201ENST00000410125 130 ntBASIC2.37□□□□□ -2.03
VCANP13611 AC092798.1-201ENST00000458542 409 ntBASIC2.37□□□□□ -2.03
VCANP13611 AC233280.2-201ENST00000603917 1070 ntBASIC2.37□□□□□ -2.03
VCANP13611 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
VCANP13611 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.37□□□□□ -2.03
VCANP13611 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.37□□□□□ -2.03
VCANP13611 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
VCANP13611 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
VCANP13611 Y_RNA.327-201ENST00000365201 102 ntBASIC2.36□□□□□ -2.03
VCANP13611 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
VCANP13611 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.36□□□□□ -2.03
VCANP13611 AC004987.3-201ENST00000413879 771 ntBASIC2.36□□□□□ -2.03
VCANP13611 RPL21P41-201ENST00000459863 264 ntBASIC2.36□□□□□ -2.03
VCANP13611 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC2.36□□□□□ -2.03
VCANP13611 RN7SKP43-201ENST00000516173 320 ntBASIC2.36□□□□□ -2.03
VCANP13611 AC128657.1-201ENST00000549459 145 ntBASIC2.36□□□□□ -2.03
VCANP13611 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
VCANP13611 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.36□□□□□ -2.03
VCANP13611 AC061975.8-201ENST00000587058 721 ntBASIC2.36□□□□□ -2.03
VCANP13611 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
VCANP13611 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
VCANP13611 RPS15AP28-201ENST00000435088 386 ntBASIC2.36□□□□□ -2.03
VCANP13611 AL355836.1-201ENST00000555951 870 ntBASIC2.36□□□□□ -2.03
VCANP13611 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC2.36□□□□□ -2.03
VCANP13611 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
VCANP13611 AC004965.1-201ENST00000413033 213 ntBASIC2.36□□□□□ -2.03
VCANP13611 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms