Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 AC016590.3-201ENST00000611171 753 ntBASIC2.35□□□□□ -2.03
TPRP12270 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC2.35□□□□□ -2.03
TPRP12270 Z82209.1-201ENST00000422141 2135 ntBASIC2.34□□□□□ -2.03
TPRP12270 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC2.34□□□□□ -2.03
TPRP12270 AL138878.1-201ENST00000405131 347 ntBASIC2.34□□□□□ -2.03
TPRP12270 RPL32P35-201ENST00000415214 394 ntBASIC2.34□□□□□ -2.03
TPRP12270 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
TPRP12270 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.34□□□□□ -2.03
TPRP12270 AC135721.1-201ENST00000497954 479 ntBASIC2.34□□□□□ -2.03
TPRP12270 RNU4-62P-201ENST00000410125 130 ntBASIC2.34□□□□□ -2.04
TPRP12270 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.34□□□□□ -2.04
TPRP12270 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.34□□□□□ -2.04
TPRP12270 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC2.34□□□□□ -2.04
TPRP12270 AC108078.3-201ENST00000502633 489 ntBASIC2.34□□□□□ -2.04
TPRP12270 OR8L1P-201ENST00000534005 955 ntBASIC2.34□□□□□ -2.04
TPRP12270 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.34□□□□□ -2.04
TPRP12270 PSMA3P-201ENST00000555485 635 ntBASIC2.34□□□□□ -2.04
TPRP12270 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.04
TPRP12270 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC2.34□□□□□ -2.04
TPRP12270 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
TPRP12270 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
TPRP12270 RNA5SP383-201ENST00000362934 120 ntBASIC2.33□□□□□ -2.04
TPRP12270 Y_RNA.205-201ENST00000364128 113 ntBASIC2.33□□□□□ -2.04
TPRP12270 Y_RNA.224-201ENST00000364308 111 ntBASIC2.33□□□□□ -2.04
TPRP12270 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.33□□□□□ -2.04
TPRP12270 BTF3P4-201ENST00000418852 495 ntBASIC2.33□□□□□ -2.04
TPRP12270 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TPRP12270 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.33□□□□□ -2.04
TPRP12270 AC107398.1-201ENST00000486904 505 ntBASIC2.33□□□□□ -2.04
TPRP12270 NIPA2P2-201ENST00000496376 1083 ntBASIC2.33□□□□□ -2.04
TPRP12270 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.33□□□□□ -2.04
TPRP12270 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC2.33□□□□□ -2.04
TPRP12270 AC025946.2-201ENST00000603398 234 ntBASIC2.33□□□□□ -2.04
TPRP12270 AC103710.2-201ENST00000609912 942 ntBASIC2.33□□□□□ -2.04
TPRP12270 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.33□□□□□ -2.04
TPRP12270 AC087565.3-202ENST00000642085 1603 ntBASIC2.33□□□□□ -2.04
TPRP12270 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
TPRP12270 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
TPRP12270 RNU1-75P-201ENST00000347264 129 ntBASIC2.32□□□□□ -2.04
TPRP12270 RNU1-91P-201ENST00000364746 163 ntBASIC2.32□□□□□ -2.04
TPRP12270 RPL23AP48-201ENST00000406913 488 ntBASIC2.32□□□□□ -2.04
TPRP12270 RPL23AP45-201ENST00000476406 468 ntBASIC2.32□□□□□ -2.04
TPRP12270 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC2.32□□□□□ -2.04
TPRP12270 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.32□□□□□ -2.04
TPRP12270 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.32□□□□□ -2.04
TPRP12270 AC135628.1-201ENST00000568867 534 ntBASIC2.32□□□□□ -2.04
TPRP12270 RPL23AP84-201ENST00000571193 464 ntBASIC2.32□□□□□ -2.04
TPRP12270 AL158196.1-201ENST00000616786 434 ntBASIC2.32□□□□□ -2.04
TPRP12270 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.32□□□□□ -2.04
TPRP12270 AC006111.3-201ENST00000622137 383 ntBASIC2.32□□□□□ -2.04
TPRP12270 METTL8-218ENST00000638989 876 ntTSL 5 BASIC2.32□□□□□ -2.04
TPRP12270 METTL8-219ENST00000640734 726 ntTSL 2 BASIC2.32□□□□□ -2.04
TPRP12270 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC2.32□□□□□ -2.04
TPRP12270 AC093311.1-201ENST00000506586 2021 ntBASIC2.32□□□□□ -2.04
TPRP12270 AC107081.3-201ENST00000612715 2034 ntBASIC2.32□□□□□ -2.04
TPRP12270 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
TPRP12270 MTND4P10-201ENST00000446199 1363 ntBASIC2.32□□□□□ -2.04
TPRP12270 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
TPRP12270 RNU6-457P-201ENST00000363999 107 ntBASIC2.32□□□□□ -2.04
TPRP12270 SNORA46-201ENST00000384762 135 ntBASIC2.32□□□□□ -2.04
TPRP12270 GLS-203ENST00000409215 632 ntTSL 4 BASIC2.32□□□□□ -2.04
TPRP12270 YPEL5P1-201ENST00000419731 367 ntBASIC2.32□□□□□ -2.04
TPRP12270 EXTL2P1-201ENST00000446218 416 ntBASIC2.32□□□□□ -2.04
TPRP12270 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC2.32□□□□□ -2.04
TPRP12270 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.32□□□□□ -2.04
TPRP12270 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.32□□□□□ -2.04
TPRP12270 AC003982.1-202ENST00000469928 248 ntBASIC2.32□□□□□ -2.04
TPRP12270 AC021146.8-201ENST00000507455 733 ntBASIC2.32□□□□□ -2.04
TPRP12270 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.32□□□□□ -2.04
TPRP12270 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.32□□□□□ -2.04
TPRP12270 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.32□□□□□ -2.04
TPRP12270 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.32□□□□□ -2.04
TPRP12270 BMS1P7-201ENST00000602440 1052 ntBASIC2.32□□□□□ -2.04
TPRP12270 AL365503.1-201ENST00000605247 905 ntBASIC2.32□□□□□ -2.04
TPRP12270 MIR6504-201ENST00000613520 61 ntBASIC2.32□□□□□ -2.04
TPRP12270 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
TPRP12270 AC109315.1-201ENST00000584143 1347 ntBASIC2.31□□□□□ -2.04
TPRP12270 RNU6-1140P-201ENST00000410517 106 ntBASIC2.31□□□□□ -2.04
TPRP12270 RPS29P6-201ENST00000438196 145 ntBASIC2.31□□□□□ -2.04
TPRP12270 AL591719.1-201ENST00000444669 744 ntBASIC2.31□□□□□ -2.04
TPRP12270 FAM92A1P2-202ENST00000504766 877 ntBASIC2.31□□□□□ -2.04
TPRP12270 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.31□□□□□ -2.04
TPRP12270 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.31□□□□□ -2.04
TPRP12270 MIR4452-201ENST00000583004 71 ntBASIC2.31□□□□□ -2.04
TPRP12270 YWHAEP7-203ENST00000622054 312 ntBASIC2.31□□□□□ -2.04
TPRP12270 MTND5P19-201ENST00000424872 1794 ntBASIC2.31□□□□□ -2.04
TPRP12270 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
TPRP12270 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
TPRP12270 AP001486.2-201ENST00000561652 5113 ntBASIC2.31□□□□□ -2.04
TPRP12270 MIR137-201ENST00000385223 102 ntBASIC2.31□□□□□ -2.04
TPRP12270 USP9YP20-201ENST00000419224 558 ntBASIC2.31□□□□□ -2.04
TPRP12270 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.31□□□□□ -2.04
TPRP12270 AC021146.5-201ENST00000503544 545 ntBASIC2.31□□□□□ -2.04
TPRP12270 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
TPRP12270 AL512646.1-201ENST00000269395 1077 ntBASIC2.3□□□□□ -2.04
TPRP12270 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC2.3□□□□□ -2.04
TPRP12270 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.3□□□□□ -2.04
TPRP12270 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.3□□□□□ -2.04
TPRP12270 AC080013.2-201ENST00000460866 323 ntBASIC2.3□□□□□ -2.04
TPRP12270 AC072039.1-201ENST00000477611 581 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms