Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TOP2AP11388 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
TOP2AP11388 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TOP2AP11388 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.93□□□□□ -1.78
TOP2AP11388 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
TOP2AP11388 RNA5SP99-201ENST00000364020 114 ntBASIC3.93□□□□□ -1.78
TOP2AP11388 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.93□□□□□ -1.78
TOP2AP11388 RPS24P8-201ENST00000431490 402 ntBASIC3.93□□□□□ -1.78
TOP2AP11388 AC098826.1-201ENST00000433943 471 ntBASIC3.93□□□□□ -1.78
TOP2AP11388 AC091544.1-201ENST00000484702 348 ntBASIC3.93□□□□□ -1.78
TOP2AP11388 GOLGA5P1-201ENST00000507317 980 ntBASIC3.93□□□□□ -1.78
TOP2AP11388 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.93□□□□□ -1.78
TOP2AP11388 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.93□□□□□ -1.78
TOP2AP11388 AC023813.4-201ENST00000607580 580 ntBASIC3.93□□□□□ -1.78
TOP2AP11388 PHKBP1-201ENST00000450951 1951 ntBASIC3.93□□□□□ -1.78
TOP2AP11388 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
TOP2AP11388 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
TOP2AP11388 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.93□□□□□ -1.78
TOP2AP11388 AL139156.1-201ENST00000412785 841 ntBASIC3.92□□□□□ -1.78
TOP2AP11388 RNA5SP200-201ENST00000516360 103 ntBASIC3.92□□□□□ -1.78
TOP2AP11388 AL450489.1-201ENST00000612071 468 ntBASIC3.92□□□□□ -1.78
TOP2AP11388 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.92□□□□□ -1.78
TOP2AP11388 AC008432.1-201ENST00000615912 1320 ntBASIC3.92□□□□□ -1.78
TOP2AP11388 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TOP2AP11388 AC091152.2-201ENST00000591628 2569 ntBASIC3.92□□□□□ -1.78
TOP2AP11388 AC002543.1-201ENST00000299783 1954 ntBASIC3.91□□□□□ -1.78
TOP2AP11388 FRG1BP-201ENST00000278882 761 ntBASIC3.91□□□□□ -1.78
TOP2AP11388 MIR21-201ENST00000362134 72 ntBASIC3.91□□□□□ -1.78
TOP2AP11388 MIR137-201ENST00000385223 102 ntBASIC3.91□□□□□ -1.78
TOP2AP11388 AC234781.4-201ENST00000419384 244 ntBASIC3.91□□□□□ -1.78
TOP2AP11388 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.91□□□□□ -1.78
TOP2AP11388 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.91□□□□□ -1.78
TOP2AP11388 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.91□□□□□ -1.78
TOP2AP11388 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.91□□□□□ -1.78
TOP2AP11388 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
TOP2AP11388 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.91□□□□□ -1.78
TOP2AP11388 AL645944.1-201ENST00000603857 493 ntBASIC3.91□□□□□ -1.78
TOP2AP11388 AC107294.3-201ENST00000609211 526 ntBASIC3.91□□□□□ -1.78
TOP2AP11388 AC002076.2-201ENST00000617362 122 ntBASIC3.91□□□□□ -1.78
TOP2AP11388 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
TOP2AP11388 AC093591.3-201ENST00000634516 308 ntBASIC3.91□□□□□ -1.78
TOP2AP11388 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
TOP2AP11388 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
TOP2AP11388 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
TOP2AP11388 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.9□□□□□ -1.78
TOP2AP11388 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.9□□□□□ -1.78
TOP2AP11388 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.9□□□□□ -1.78
TOP2AP11388 RPS27P27-201ENST00000498779 255 ntBASIC3.9□□□□□ -1.78
TOP2AP11388 AC019227.1-201ENST00000526902 510 ntBASIC3.9□□□□□ -1.78
TOP2AP11388 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.9□□□□□ -1.78
TOP2AP11388 ELOCP31-201ENST00000540463 467 ntBASIC3.9□□□□□ -1.78
TOP2AP11388 AC135628.1-201ENST00000568867 534 ntBASIC3.9□□□□□ -1.78
TOP2AP11388 AC010378.1-201ENST00000619270 362 ntBASIC3.9□□□□□ -1.78
TOP2AP11388 PNPT1P2-201ENST00000456768 2050 ntBASIC3.9□□□□□ -1.78
TOP2AP11388 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
TOP2AP11388 HMGB1P18-201ENST00000438801 619 ntBASIC3.9□□□□□ -1.79
TOP2AP11388 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.9□□□□□ -1.79
TOP2AP11388 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.9□□□□□ -1.79
TOP2AP11388 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.9□□□□□ -1.79
TOP2AP11388 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.9□□□□□ -1.79
TOP2AP11388 MIR6733-201ENST00000635723 61 ntBASIC3.9□□□□□ -1.79
TOP2AP11388 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.89□□□□□ -1.79
TOP2AP11388 MTCO1P9-201ENST00000505577 1534 ntBASIC3.89□□□□□ -1.79
TOP2AP11388 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
TOP2AP11388 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TOP2AP11388 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TOP2AP11388 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TOP2AP11388 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
TOP2AP11388 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TOP2AP11388 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.89□□□□□ -1.79
TOP2AP11388 ATP5F1P6-201ENST00000402768 767 ntBASIC3.89□□□□□ -1.79
TOP2AP11388 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TOP2AP11388 AL357520.1-201ENST00000441557 453 ntBASIC3.89□□□□□ -1.79
TOP2AP11388 GSTA11P-201ENST00000452866 669 ntBASIC3.89□□□□□ -1.79
TOP2AP11388 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.89□□□□□ -1.79
TOP2AP11388 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.89□□□□□ -1.79
TOP2AP11388 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.89□□□□□ -1.79
TOP2AP11388 AADACP1-206ENST00000561502 1193 ntBASIC3.89□□□□□ -1.79
TOP2AP11388 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.89□□□□□ -1.79
TOP2AP11388 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
TOP2AP11388 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.88□□□□□ -1.79
TOP2AP11388 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.88□□□□□ -1.79
TOP2AP11388 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.88□□□□□ -1.79
TOP2AP11388 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.88□□□□□ -1.79
TOP2AP11388 AP001521.1-201ENST00000609150 300 ntBASIC3.88□□□□□ -1.79
TOP2AP11388 AC104237.2-201ENST00000612456 443 ntBASIC3.88□□□□□ -1.79
TOP2AP11388 AL356266.1-201ENST00000623311 483 ntBASIC3.88□□□□□ -1.79
TOP2AP11388 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
TOP2AP11388 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.87□□□□□ -1.79
TOP2AP11388 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.87□□□□□ -1.79
TOP2AP11388 AP000893.1-201ENST00000474462 794 ntBASIC3.87□□□□□ -1.79
TOP2AP11388 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.87□□□□□ -1.79
TOP2AP11388 RNA5SP458-201ENST00000516188 119 ntBASIC3.87□□□□□ -1.79
TOP2AP11388 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.87□□□□□ -1.79
TOP2AP11388 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.87□□□□□ -1.79
TOP2AP11388 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.87□□□□□ -1.79
TOP2AP11388 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.87□□□□□ -1.79
TOP2AP11388 MIR219B-201ENST00000637023 88 ntBASIC3.87□□□□□ -1.79
TOP2AP11388 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.87□□□□□ -1.79
TOP2AP11388 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms