Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.54□□□□□ -2
CD28P10747 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.54□□□□□ -2
CD28P10747 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC2.54□□□□□ -2
CD28P10747 AC000041.1-201ENST00000439655 175 ntBASIC2.54□□□□□ -2
CD28P10747 AL831737.1-201ENST00000441288 271 ntBASIC2.54□□□□□ -2
CD28P10747 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.54□□□□□ -2
CD28P10747 SEPT14P24-201ENST00000447236 180 ntBASIC2.54□□□□□ -2
CD28P10747 RPL12P26-201ENST00000452430 487 ntBASIC2.54□□□□□ -2
CD28P10747 AC010468.1-201ENST00000461022 817 ntBASIC2.54□□□□□ -2
CD28P10747 NAP1L1P3-201ENST00000462291 880 ntBASIC2.54□□□□□ -2
CD28P10747 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.54□□□□□ -2
CD28P10747 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.54□□□□□ -2
CD28P10747 AC109925.1-201ENST00000478069 331 ntBASIC2.54□□□□□ -2
CD28P10747 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.54□□□□□ -2
CD28P10747 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.54□□□□□ -2
CD28P10747 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC2.54□□□□□ -2
CD28P10747 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.54□□□□□ -2
CD28P10747 AC119751.1-201ENST00000513357 765 ntBASIC2.54□□□□□ -2
CD28P10747 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC2.54□□□□□ -2
CD28P10747 AC107934.2-201ENST00000518653 310 ntBASIC2.54□□□□□ -2
CD28P10747 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.54□□□□□ -2
CD28P10747 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.54□□□□□ -2
CD28P10747 AC113192.3-201ENST00000529152 742 ntBASIC2.54□□□□□ -2
CD28P10747 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.54□□□□□ -2
CD28P10747 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.54□□□□□ -2
CD28P10747 AC011602.1-201ENST00000546484 331 ntBASIC2.54□□□□□ -2
CD28P10747 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC2.54□□□□□ -2
CD28P10747 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.54□□□□□ -2
CD28P10747 AC107954.1-201ENST00000565906 727 ntBASIC2.54□□□□□ -2
CD28P10747 MIR4789-201ENST00000577469 82 ntBASIC2.54□□□□□ -2
CD28P10747 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.54□□□□□ -2
CD28P10747 AC113368.1-201ENST00000603736 382 ntBASIC2.54□□□□□ -2
CD28P10747 AC011468.4-201ENST00000603942 409 ntBASIC2.54□□□□□ -2
CD28P10747 AL009028.1-201ENST00000604895 802 ntBASIC2.54□□□□□ -2
CD28P10747 AC011816.2-201ENST00000607089 556 ntBASIC2.54□□□□□ -2
CD28P10747 AC013468.1-201ENST00000608680 598 ntBASIC2.54□□□□□ -2
CD28P10747 AL157817.1-201ENST00000614264 790 ntBASIC2.54□□□□□ -2
CD28P10747 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.54□□□□□ -2
CD28P10747 AC138932.5-201ENST00000617759 563 ntBASIC2.54□□□□□ -2
CD28P10747 U73479.1-201ENST00000618062 168 ntBASIC2.54□□□□□ -2
CD28P10747 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.54□□□□□ -2
CD28P10747 AC068722.2-201ENST00000618734 544 ntBASIC2.54□□□□□ -2
CD28P10747 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.54□□□□□ -2
CD28P10747 CR381572.1-201ENST00000625098 102 ntBASIC2.54□□□□□ -2
CD28P10747 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.54□□□□□ -2
CD28P10747 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.54□□□□□ -2
CD28P10747 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.54□□□□□ -2
CD28P10747 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.54□□□□□ -2
CD28P10747 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CD28P10747 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
CD28P10747 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CD28P10747 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.54□□□□□ -2
CD28P10747 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.54□□□□□ -2
CD28P10747 ZNF807-201ENST00000328088 1707 ntBASIC2.54□□□□□ -2
CD28P10747 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.54□□□□□ -2
CD28P10747 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.54□□□□□ -2
CD28P10747 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.53□□□□□ -2
CD28P10747 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
CD28P10747 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
CD28P10747 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CD28P10747 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.53□□□□□ -2
CD28P10747 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.53□□□□□ -2
CD28P10747 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
CD28P10747 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC2.53□□□□□ -2
CD28P10747 RNU1-70P-201ENST00000362618 164 ntBASIC2.53□□□□□ -2
CD28P10747 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.53□□□□□ -2
CD28P10747 RNU6-730P-201ENST00000383954 104 ntBASIC2.53□□□□□ -2
CD28P10747 RNU6-339P-201ENST00000384310 107 ntBASIC2.53□□□□□ -2
CD28P10747 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.53□□□□□ -2
CD28P10747 U3.26-201ENST00000391236 204 ntBASIC2.53□□□□□ -2
CD28P10747 MTCO2P31-201ENST00000402702 684 ntBASIC2.53□□□□□ -2
CD28P10747 AL583834.1-201ENST00000406943 343 ntBASIC2.53□□□□□ -2
CD28P10747 RNU2-72P-201ENST00000411175 163 ntBASIC2.53□□□□□ -2
CD28P10747 AC007899.1-201ENST00000412776 775 ntBASIC2.53□□□□□ -2
CD28P10747 AC027644.1-201ENST00000419595 298 ntBASIC2.53□□□□□ -2
CD28P10747 RPS15AP6-201ENST00000420703 385 ntBASIC2.53□□□□□ -2
CD28P10747 AC246680.2-201ENST00000422106 389 ntBASIC2.53□□□□□ -2
CD28P10747 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.53□□□□□ -2
CD28P10747 MTCO2P1-201ENST00000424648 477 ntBASIC2.53□□□□□ -2
CD28P10747 NEK4P1-201ENST00000433383 879 ntBASIC2.53□□□□□ -2
CD28P10747 RPL21P112-201ENST00000434403 463 ntBASIC2.53□□□□□ -2
CD28P10747 SETP5-201ENST00000437270 562 ntBASIC2.53□□□□□ -2
CD28P10747 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.53□□□□□ -2
CD28P10747 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC2.53□□□□□ -2
CD28P10747 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC2.53□□□□□ -2
CD28P10747 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.53□□□□□ -2
CD28P10747 AC104073.1-201ENST00000451988 151 ntBASIC2.53□□□□□ -2
CD28P10747 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.53□□□□□ -2
CD28P10747 RPL27AP5-201ENST00000469428 449 ntBASIC2.53□□□□□ -2
CD28P10747 AC087312.1-201ENST00000471411 480 ntBASIC2.53□□□□□ -2
CD28P10747 AC020893.1-201ENST00000502452 580 ntBASIC2.53□□□□□ -2
CD28P10747 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.53□□□□□ -2
CD28P10747 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC2.53□□□□□ -2
CD28P10747 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.53□□□□□ -2
CD28P10747 RNU6-467P-201ENST00000517027 110 ntBASIC2.53□□□□□ -2
CD28P10747 RNU6-334P-201ENST00000517072 102 ntBASIC2.53□□□□□ -2
CD28P10747 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC2.53□□□□□ -2
CD28P10747 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.53□□□□□ -2
CD28P10747 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC2.53□□□□□ -2
CD28P10747 HMGB1P1-201ENST00000522557 636 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms