Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC2.15□□□□□ -2.07
CXCL1P09341 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.15□□□□□ -2.07
CXCL1P09341 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.15□□□□□ -2.07
CXCL1P09341 AC018755.4-201ENST00000619715 454 ntBASIC2.15□□□□□ -2.07
CXCL1P09341 AC233263.6-201ENST00000631132 1963 ntBASIC2.15□□□□□ -2.07
CXCL1P09341 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CXCL1P09341 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.15□□□□□ -2.07
CXCL1P09341 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CXCL1P09341 FRG1BP-201ENST00000278882 761 ntBASIC2.14□□□□□ -2.07
CXCL1P09341 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CXCL1P09341 RNU6-851P-201ENST00000384565 107 ntBASIC2.14□□□□□ -2.07
CXCL1P09341 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
CXCL1P09341 AC245052.5-201ENST00000416320 649 ntBASIC2.14□□□□□ -2.07
CXCL1P09341 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.14□□□□□ -2.07
CXCL1P09341 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.14□□□□□ -2.07
CXCL1P09341 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.14□□□□□ -2.07
CXCL1P09341 AC097713.2-201ENST00000430199 356 ntBASIC2.14□□□□□ -2.07
CXCL1P09341 TRAPPC13P1-201ENST00000435991 1062 ntBASIC2.14□□□□□ -2.07
CXCL1P09341 CDC27P1-201ENST00000445384 715 ntBASIC2.14□□□□□ -2.07
CXCL1P09341 AC034236.1-201ENST00000469891 373 ntBASIC2.14□□□□□ -2.07
CXCL1P09341 RN7SL601P-201ENST00000471221 293 ntBASIC2.14□□□□□ -2.07
CXCL1P09341 AC117440.1-201ENST00000474107 571 ntBASIC2.14□□□□□ -2.07
CXCL1P09341 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC2.14□□□□□ -2.07
CXCL1P09341 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.14□□□□□ -2.07
CXCL1P09341 AC133963.2-201ENST00000513686 578 ntBASIC2.14□□□□□ -2.07
CXCL1P09341 MTND4LP31-201ENST00000514859 294 ntBASIC2.14□□□□□ -2.07
CXCL1P09341 OR8I1P-201ENST00000529291 931 ntBASIC2.14□□□□□ -2.07
CXCL1P09341 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.14□□□□□ -2.07
CXCL1P09341 NBEAP1-201ENST00000554452 979 ntBASIC2.14□□□□□ -2.07
CXCL1P09341 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC2.14□□□□□ -2.07
CXCL1P09341 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.14□□□□□ -2.07
CXCL1P09341 AL049874.4-201ENST00000557593 255 ntBASIC2.14□□□□□ -2.07
CXCL1P09341 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.14□□□□□ -2.07
CXCL1P09341 MTCYBP28-201ENST00000566728 1132 ntBASIC2.14□□□□□ -2.07
CXCL1P09341 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.14□□□□□ -2.07
CXCL1P09341 AC245036.5-201ENST00000596330 847 ntBASIC2.14□□□□□ -2.07
CXCL1P09341 AC091057.2-201ENST00000602594 792 ntBASIC2.14□□□□□ -2.07
CXCL1P09341 AC019159.1-201ENST00000605094 187 ntBASIC2.14□□□□□ -2.07
CXCL1P09341 BNIP3P7-201ENST00000605641 516 ntBASIC2.14□□□□□ -2.07
CXCL1P09341 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.14□□□□□ -2.07
CXCL1P09341 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC2.14□□□□□ -2.07
CXCL1P09341 AC024023.1-201ENST00000624530 922 ntBASIC2.14□□□□□ -2.07
CXCL1P09341 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
CXCL1P09341 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.14□□□□□ -2.07
CXCL1P09341 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.14□□□□□ -2.07
CXCL1P09341 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
CXCL1P09341 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CXCL1P09341 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CXCL1P09341 AC092593.1-201ENST00000515413 1815 ntBASIC2.13□□□□□ -2.07
CXCL1P09341 SNORA80E-201ENST00000384744 137 ntBASIC2.13□□□□□ -2.07
CXCL1P09341 SNORA57.1-201ENST00000391227 145 ntBASIC2.13□□□□□ -2.07
CXCL1P09341 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC2.13□□□□□ -2.07
CXCL1P09341 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
CXCL1P09341 RN7SKP202-201ENST00000410439 330 ntBASIC2.13□□□□□ -2.07
CXCL1P09341 RNA5SP38-201ENST00000410750 119 ntBASIC2.13□□□□□ -2.07
CXCL1P09341 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.13□□□□□ -2.07
CXCL1P09341 OFD1P18Y-201ENST00000420889 959 ntBASIC2.13□□□□□ -2.07
CXCL1P09341 HMGN2P30-201ENST00000423237 256 ntBASIC2.13□□□□□ -2.07
CXCL1P09341 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.13□□□□□ -2.07
CXCL1P09341 OR6C71P-201ENST00000432580 913 ntBASIC2.13□□□□□ -2.07
CXCL1P09341 PTP4A1P3-201ENST00000433661 420 ntBASIC2.13□□□□□ -2.07
CXCL1P09341 AC006028.1-201ENST00000438379 402 ntBASIC2.13□□□□□ -2.07
CXCL1P09341 AL513043.1-201ENST00000439124 535 ntBASIC2.13□□□□□ -2.07
CXCL1P09341 AC093156.1-201ENST00000440382 670 ntBASIC2.13□□□□□ -2.07
CXCL1P09341 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.13□□□□□ -2.07
CXCL1P09341 H2AFZP6-201ENST00000444403 394 ntBASIC2.13□□□□□ -2.07
CXCL1P09341 Z96811.1-201ENST00000445880 108 ntBASIC2.13□□□□□ -2.07
CXCL1P09341 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.13□□□□□ -2.07
CXCL1P09341 PDSS1P2-201ENST00000449397 678 ntBASIC2.13□□□□□ -2.07
CXCL1P09341 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.13□□□□□ -2.07
CXCL1P09341 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.13□□□□□ -2.07
CXCL1P09341 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
CXCL1P09341 SRIP1-201ENST00000489235 288 ntBASIC2.13□□□□□ -2.07
CXCL1P09341 AC025459.1-201ENST00000504072 156 ntBASIC2.13□□□□□ -2.07
CXCL1P09341 AC006499.5-201ENST00000505037 514 ntBASIC2.13□□□□□ -2.07
CXCL1P09341 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.13□□□□□ -2.07
CXCL1P09341 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.13□□□□□ -2.07
CXCL1P09341 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.13□□□□□ -2.07
CXCL1P09341 RN7SKP272-201ENST00000516988 232 ntBASIC2.13□□□□□ -2.07
CXCL1P09341 ERHP1-201ENST00000523006 310 ntBASIC2.13□□□□□ -2.07
CXCL1P09341 OR4V1P-201ENST00000525394 1140 ntBASIC2.13□□□□□ -2.07
CXCL1P09341 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.13□□□□□ -2.07
CXCL1P09341 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.13□□□□□ -2.07
CXCL1P09341 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC2.13□□□□□ -2.07
CXCL1P09341 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.13□□□□□ -2.07
CXCL1P09341 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.13□□□□□ -2.07
CXCL1P09341 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC2.13□□□□□ -2.07
CXCL1P09341 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.13□□□□□ -2.07
CXCL1P09341 UBL5P2-201ENST00000583788 219 ntBASIC2.13□□□□□ -2.07
CXCL1P09341 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.13□□□□□ -2.07
CXCL1P09341 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.13□□□□□ -2.07
CXCL1P09341 AC073111.2-201ENST00000605657 1075 ntBASIC2.13□□□□□ -2.07
CXCL1P09341 AC110792.4-201ENST00000609843 298 ntBASIC2.13□□□□□ -2.07
CXCL1P09341 AC011890.2-201ENST00000613393 294 ntBASIC2.13□□□□□ -2.07
CXCL1P09341 AC092650.2-201ENST00000619984 902 ntBASIC2.13□□□□□ -2.07
CXCL1P09341 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.13□□□□□ -2.07
CXCL1P09341 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.13□□□□□ -2.07
CXCL1P09341 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
CXCL1P09341 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CXCL1P09341 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms