Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 MTCYBP31-201ENST00000438855 1122 ntBASIC2.81□□□□□ -1.96
HLA-DPB1P04440 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.81□□□□□ -1.96
HLA-DPB1P04440 GAPDHP27-201ENST00000447427 1020 ntBASIC2.81□□□□□ -1.96
HLA-DPB1P04440 AL358232.1-201ENST00000448030 501 ntBASIC2.81□□□□□ -1.96
HLA-DPB1P04440 AC104073.1-201ENST00000451988 151 ntBASIC2.81□□□□□ -1.96
HLA-DPB1P04440 HMGN2P7-201ENST00000456186 273 ntBASIC2.81□□□□□ -1.96
HLA-DPB1P04440 RPL23AP62-201ENST00000463396 453 ntBASIC2.81□□□□□ -1.96
HLA-DPB1P04440 NCOR1P1-202ENST00000486162 291 ntBASIC2.81□□□□□ -1.96
HLA-DPB1P04440 HMGB1P38-201ENST00000490557 577 ntBASIC2.81□□□□□ -1.96
HLA-DPB1P04440 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.81□□□□□ -1.96
HLA-DPB1P04440 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
HLA-DPB1P04440 AC118282.2-201ENST00000508739 374 ntBASIC2.81□□□□□ -1.96
HLA-DPB1P04440 AC048346.1-201ENST00000510247 144 ntBASIC2.81□□□□□ -1.96
HLA-DPB1P04440 MTCYBP37-201ENST00000510642 1133 ntBASIC2.81□□□□□ -1.96
HLA-DPB1P04440 RNU6-885P-201ENST00000516607 104 ntBASIC2.81□□□□□ -1.96
HLA-DPB1P04440 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.81□□□□□ -1.96
HLA-DPB1P04440 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.81□□□□□ -1.96
HLA-DPB1P04440 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.81□□□□□ -1.96
HLA-DPB1P04440 OR8K4P-201ENST00000534608 872 ntBASIC2.81□□□□□ -1.96
HLA-DPB1P04440 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.81□□□□□ -1.96
HLA-DPB1P04440 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.81□□□□□ -1.96
HLA-DPB1P04440 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.81□□□□□ -1.96
HLA-DPB1P04440 AC074051.3-201ENST00000570238 358 ntBASIC2.81□□□□□ -1.96
HLA-DPB1P04440 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.81□□□□□ -1.96
HLA-DPB1P04440 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.81□□□□□ -1.96
HLA-DPB1P04440 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.81□□□□□ -1.96
HLA-DPB1P04440 RPAP2P1-201ENST00000603626 1168 ntBASIC2.81□□□□□ -1.96
HLA-DPB1P04440 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DPB1P04440 AC008759.3-201ENST00000613300 508 ntBASIC2.81□□□□□ -1.96
HLA-DPB1P04440 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.81□□□□□ -1.96
HLA-DPB1P04440 AC253576.2-201ENST00000618815 580 ntBASIC2.81□□□□□ -1.96
HLA-DPB1P04440 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.81□□□□□ -1.96
HLA-DPB1P04440 SNORA50A-202ENST00000629536 136 ntBASIC2.81□□□□□ -1.96
HLA-DPB1P04440 U6.98-201ENST00000637157 84 ntBASIC2.81□□□□□ -1.96
HLA-DPB1P04440 GABPAP-201ENST00000419271 1356 ntBASIC2.81□□□□□ -1.96
HLA-DPB1P04440 AL157700.1-201ENST00000561973 1432 ntBASIC2.81□□□□□ -1.96
HLA-DPB1P04440 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
HLA-DPB1P04440 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DPB1P04440 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DPB1P04440 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DPB1P04440 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DPB1P04440 Z83843.1-201ENST00000604070 3685 ntBASIC2.8□□□□□ -1.96
HLA-DPB1P04440 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
HLA-DPB1P04440 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HLA-DPB1P04440 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.8□□□□□ -1.96
HLA-DPB1P04440 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.8□□□□□ -1.96
HLA-DPB1P04440 AC111188.2-201ENST00000529697 1387 ntBASIC2.8□□□□□ -1.96
HLA-DPB1P04440 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HLA-DPB1P04440 SEPT7P7-201ENST00000420492 1301 ntBASIC2.8□□□□□ -1.96
HLA-DPB1P04440 RNU6-582P-201ENST00000362989 107 ntBASIC2.8□□□□□ -1.96
HLA-DPB1P04440 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HLA-DPB1P04440 RNU6-629P-201ENST00000384061 103 ntBASIC2.8□□□□□ -1.96
HLA-DPB1P04440 Y_RNA.493-201ENST00000384422 102 ntBASIC2.8□□□□□ -1.96
HLA-DPB1P04440 RNU6-549P-201ENST00000384433 107 ntBASIC2.8□□□□□ -1.96
HLA-DPB1P04440 MIR649-201ENST00000384843 97 ntBASIC2.8□□□□□ -1.96
HLA-DPB1P04440 AL139098.1-201ENST00000407291 389 ntBASIC2.8□□□□□ -1.96
HLA-DPB1P04440 MTCYBP24-201ENST00000420387 1106 ntBASIC2.8□□□□□ -1.96
HLA-DPB1P04440 OFD1P18Y-201ENST00000420889 959 ntBASIC2.8□□□□□ -1.96
HLA-DPB1P04440 AC096632.1-201ENST00000427395 310 ntBASIC2.8□□□□□ -1.96
HLA-DPB1P04440 AC093151.1-201ENST00000427711 313 ntBASIC2.8□□□□□ -1.96
HLA-DPB1P04440 RPL21P13-201ENST00000488305 481 ntBASIC2.8□□□□□ -1.96
HLA-DPB1P04440 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.8□□□□□ -1.96
HLA-DPB1P04440 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.8□□□□□ -1.96
HLA-DPB1P04440 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.8□□□□□ -1.96
HLA-DPB1P04440 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.8□□□□□ -1.96
HLA-DPB1P04440 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.8□□□□□ -1.96
HLA-DPB1P04440 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.8□□□□□ -1.96
HLA-DPB1P04440 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
HLA-DPB1P04440 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.8□□□□□ -1.96
HLA-DPB1P04440 AC107954.1-201ENST00000565906 727 ntBASIC2.8□□□□□ -1.96
HLA-DPB1P04440 AC053481.3-201ENST00000577881 843 ntBASIC2.8□□□□□ -1.96
HLA-DPB1P04440 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC2.8□□□□□ -1.96
HLA-DPB1P04440 AC090616.5-202ENST00000582111 297 ntBASIC2.8□□□□□ -1.96
HLA-DPB1P04440 AC090330.1-201ENST00000588646 764 ntBASIC2.8□□□□□ -1.96
HLA-DPB1P04440 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC2.8□□□□□ -1.96
HLA-DPB1P04440 SNRPGP15-201ENST00000600149 222 ntBASIC2.8□□□□□ -1.96
HLA-DPB1P04440 AC099785.1-201ENST00000605697 437 ntBASIC2.8□□□□□ -1.96
HLA-DPB1P04440 AP000238.1-201ENST00000608759 426 ntBASIC2.8□□□□□ -1.96
HLA-DPB1P04440 AP005137.2-201ENST00000609238 400 ntBASIC2.8□□□□□ -1.96
HLA-DPB1P04440 VN1R74P-201ENST00000613259 503 ntBASIC2.8□□□□□ -1.96
HLA-DPB1P04440 AC018926.1-201ENST00000616335 435 ntBASIC2.8□□□□□ -1.96
HLA-DPB1P04440 AC084757.4-201ENST00000616350 526 ntBASIC2.8□□□□□ -1.96
HLA-DPB1P04440 MIR7975-201ENST00000619350 68 ntBASIC2.8□□□□□ -1.96
HLA-DPB1P04440 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.8□□□□□ -1.96
HLA-DPB1P04440 AP000943.4-201ENST00000622912 357 ntBASIC2.8□□□□□ -1.96
HLA-DPB1P04440 MIR4278-201ENST00000636094 69 ntBASIC2.8□□□□□ -1.96
HLA-DPB1P04440 AC006927.2-201ENST00000639256 389 ntBASIC2.8□□□□□ -1.96
HLA-DPB1P04440 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
HLA-DPB1P04440 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HLA-DPB1P04440 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
HLA-DPB1P04440 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.8□□□□□ -1.96
HLA-DPB1P04440 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
HLA-DPB1P04440 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HLA-DPB1P04440 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HLA-DPB1P04440 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.79□□□□□ -1.96
HLA-DPB1P04440 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.79□□□□□ -1.96
HLA-DPB1P04440 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.79□□□□□ -1.96
HLA-DPB1P04440 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
HLA-DPB1P04440 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.79□□□□□ -1.96
HLA-DPB1P04440 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms