Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC111000.2-201ENST00000507775 550 ntBASIC3.16□□□□□ -1.9
CTDNEP1O95476 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.16□□□□□ -1.9
CTDNEP1O95476 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.16□□□□□ -1.9
CTDNEP1O95476 SNORA76.2-201ENST00000517095 137 ntBASIC3.16□□□□□ -1.9
CTDNEP1O95476 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.16□□□□□ -1.9
CTDNEP1O95476 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CTDNEP1O95476 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.16□□□□□ -1.9
CTDNEP1O95476 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.16□□□□□ -1.9
CTDNEP1O95476 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.16□□□□□ -1.9
CTDNEP1O95476 AC010735.1-201ENST00000567305 1026 ntBASIC3.16□□□□□ -1.9
CTDNEP1O95476 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.16□□□□□ -1.9
CTDNEP1O95476 AL158211.2-201ENST00000607282 395 ntBASIC3.16□□□□□ -1.9
CTDNEP1O95476 AC092184.1-201ENST00000625042 715 ntBASIC3.16□□□□□ -1.9
CTDNEP1O95476 AC022031.1-201ENST00000585985 2593 ntBASIC3.16□□□□□ -1.9
CTDNEP1O95476 AC093908.1-201ENST00000623125 8092 ntBASIC3.16□□□□□ -1.9
CTDNEP1O95476 MTND5P3-201ENST00000438536 1800 ntBASIC3.16□□□□□ -1.9
CTDNEP1O95476 AC007256.1-201ENST00000392253 2765 ntBASIC3.16□□□□□ -1.9
CTDNEP1O95476 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CTDNEP1O95476 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.15□□□□□ -1.9
CTDNEP1O95476 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CTDNEP1O95476 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
CTDNEP1O95476 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CTDNEP1O95476 MIR491-201ENST00000384877 84 ntBASIC3.15□□□□□ -1.91
CTDNEP1O95476 RNU6-796P-201ENST00000391086 107 ntBASIC3.15□□□□□ -1.91
CTDNEP1O95476 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.15□□□□□ -1.91
CTDNEP1O95476 AL158825.1-201ENST00000414735 521 ntBASIC3.15□□□□□ -1.91
CTDNEP1O95476 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.15□□□□□ -1.91
CTDNEP1O95476 AC234782.4-201ENST00000417646 1048 ntBASIC3.15□□□□□ -1.91
CTDNEP1O95476 AC093151.1-201ENST00000427711 313 ntBASIC3.15□□□□□ -1.91
CTDNEP1O95476 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC3.15□□□□□ -1.91
CTDNEP1O95476 OR2B8P-201ENST00000432841 938 ntBASIC3.15□□□□□ -1.91
CTDNEP1O95476 AL512661.1-201ENST00000434586 1253 ntBASIC3.15□□□□□ -1.91
CTDNEP1O95476 MUPP-201ENST00000438111 566 ntBASIC3.15□□□□□ -1.91
CTDNEP1O95476 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.15□□□□□ -1.91
CTDNEP1O95476 PTGES3P5-201ENST00000455109 434 ntBASIC3.15□□□□□ -1.91
CTDNEP1O95476 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.15□□□□□ -1.91
CTDNEP1O95476 SNORA31.13-201ENST00000516624 135 ntBASIC3.15□□□□□ -1.91
CTDNEP1O95476 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.15□□□□□ -1.91
CTDNEP1O95476 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.15□□□□□ -1.91
CTDNEP1O95476 AC010198.2-201ENST00000550612 259 ntBASIC3.15□□□□□ -1.91
CTDNEP1O95476 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.15□□□□□ -1.91
CTDNEP1O95476 AC025918.2-201ENST00000558683 763 ntBASIC3.15□□□□□ -1.91
CTDNEP1O95476 AC007336.1-201ENST00000576365 3828 ntBASIC3.15□□□□□ -1.91
CTDNEP1O95476 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.15□□□□□ -1.91
CTDNEP1O95476 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.15□□□□□ -1.91
CTDNEP1O95476 AC096947.1-201ENST00000603233 470 ntBASIC3.15□□□□□ -1.91
CTDNEP1O95476 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.15□□□□□ -1.91
CTDNEP1O95476 AL163051.2-201ENST00000618976 735 ntBASIC3.15□□□□□ -1.91
CTDNEP1O95476 AC097460.3-201ENST00000623099 442 ntBASIC3.15□□□□□ -1.91
CTDNEP1O95476 AP001002.2-201ENST00000625137 386 ntBASIC3.15□□□□□ -1.91
CTDNEP1O95476 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CTDNEP1O95476 AL049737.1-201ENST00000413920 1403 ntBASIC3.15□□□□□ -1.91
CTDNEP1O95476 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.15□□□□□ -1.91
CTDNEP1O95476 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
CTDNEP1O95476 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.14□□□□□ -1.91
CTDNEP1O95476 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CTDNEP1O95476 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
CTDNEP1O95476 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CTDNEP1O95476 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.14□□□□□ -1.91
CTDNEP1O95476 RNA5SP391-201ENST00000363456 119 ntBASIC3.14□□□□□ -1.91
CTDNEP1O95476 RNU6-650P-201ENST00000365658 111 ntBASIC3.14□□□□□ -1.91
CTDNEP1O95476 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CTDNEP1O95476 RPL31P2-201ENST00000413849 377 ntBASIC3.14□□□□□ -1.91
CTDNEP1O95476 YPEL5P1-201ENST00000419731 367 ntBASIC3.14□□□□□ -1.91
CTDNEP1O95476 MTND2P16-201ENST00000419987 799 ntBASIC3.14□□□□□ -1.91
CTDNEP1O95476 AP000949.1-201ENST00000438328 629 ntBASIC3.14□□□□□ -1.91
CTDNEP1O95476 CYCSP32-201ENST00000440548 321 ntBASIC3.14□□□□□ -1.91
CTDNEP1O95476 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.14□□□□□ -1.91
CTDNEP1O95476 AC096992.1-201ENST00000459808 709 ntBASIC3.14□□□□□ -1.91
CTDNEP1O95476 HMGB3P15-201ENST00000507326 574 ntBASIC3.14□□□□□ -1.91
CTDNEP1O95476 AC008628.1-201ENST00000508663 265 ntBASIC3.14□□□□□ -1.91
CTDNEP1O95476 AC027338.1-201ENST00000514840 825 ntBASIC3.14□□□□□ -1.91
CTDNEP1O95476 RNA5SP385-201ENST00000515947 110 ntBASIC3.14□□□□□ -1.91
CTDNEP1O95476 CIR1P1-201ENST00000524055 1133 ntBASIC3.14□□□□□ -1.91
CTDNEP1O95476 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.14□□□□□ -1.91
CTDNEP1O95476 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CTDNEP1O95476 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.14□□□□□ -1.91
CTDNEP1O95476 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.14□□□□□ -1.91
CTDNEP1O95476 AL136520.1-202ENST00000555494 763 ntBASIC3.14□□□□□ -1.91
CTDNEP1O95476 MIR4506-201ENST00000584693 77 ntBASIC3.14□□□□□ -1.91
CTDNEP1O95476 AL451007.1-201ENST00000595491 289 ntBASIC3.14□□□□□ -1.91
CTDNEP1O95476 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.14□□□□□ -1.91
CTDNEP1O95476 MIR6864-201ENST00000617935 70 ntBASIC3.14□□□□□ -1.91
CTDNEP1O95476 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CTDNEP1O95476 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CTDNEP1O95476 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.14□□□□□ -1.91
CTDNEP1O95476 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CTDNEP1O95476 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CTDNEP1O95476 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
CTDNEP1O95476 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
CTDNEP1O95476 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CTDNEP1O95476 AL512633.1-201ENST00000399931 655 ntBASIC3.13□□□□□ -1.91
CTDNEP1O95476 RPL5P18-201ENST00000406671 891 ntBASIC3.13□□□□□ -1.91
CTDNEP1O95476 RNU4-27P-201ENST00000410889 139 ntBASIC3.13□□□□□ -1.91
CTDNEP1O95476 RNA5SP21-201ENST00000410917 96 ntBASIC3.13□□□□□ -1.91
CTDNEP1O95476 RNA5SP344-201ENST00000411081 104 ntBASIC3.13□□□□□ -1.91
CTDNEP1O95476 RNU2-6P-201ENST00000411404 190 ntBASIC3.13□□□□□ -1.91
CTDNEP1O95476 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.13□□□□□ -1.91
CTDNEP1O95476 LINC01347-201ENST00000417964 355 ntBASIC3.13□□□□□ -1.91
CTDNEP1O95476 MTCO3P4-201ENST00000419236 787 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms