Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 SNORA71.3-201ENST00000362582 128 ntBASIC2.99□□□□□ -1.93
SEMA3DO95025 SNORD56.4-201ENST00000363883 71 ntBASIC2.99□□□□□ -1.93
SEMA3DO95025 RNA5SP72-201ENST00000364442 117 ntBASIC2.99□□□□□ -1.93
SEMA3DO95025 U8.9-201ENST00000365667 134 ntBASIC2.99□□□□□ -1.93
SEMA3DO95025 AL591034.1-201ENST00000407447 340 ntBASIC2.99□□□□□ -1.93
SEMA3DO95025 RNU6-1077P-201ENST00000410506 102 ntBASIC2.99□□□□□ -1.93
SEMA3DO95025 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC2.99□□□□□ -1.93
SEMA3DO95025 AL158050.1-201ENST00000416077 457 ntBASIC2.99□□□□□ -1.93
SEMA3DO95025 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC2.99□□□□□ -1.93
SEMA3DO95025 AC005300.1-201ENST00000428401 373 ntBASIC2.99□□□□□ -1.93
SEMA3DO95025 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SEMA3DO95025 AC108734.1-201ENST00000439549 399 ntBASIC2.99□□□□□ -1.93
SEMA3DO95025 RAB11AP1-201ENST00000442978 646 ntBASIC2.99□□□□□ -1.93
SEMA3DO95025 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SEMA3DO95025 Z75741.1-201ENST00000446793 314 ntBASIC2.99□□□□□ -1.93
SEMA3DO95025 ZNF736P6Y-201ENST00000447526 1213 ntBASIC2.99□□□□□ -1.93
SEMA3DO95025 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.99□□□□□ -1.93
SEMA3DO95025 RN7SL863P-201ENST00000462370 296 ntBASIC2.99□□□□□ -1.93
SEMA3DO95025 RPL32P34-201ENST00000486380 400 ntBASIC2.99□□□□□ -1.93
SEMA3DO95025 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.99□□□□□ -1.93
SEMA3DO95025 RPL21P129-201ENST00000491732 478 ntBASIC2.99□□□□□ -1.93
SEMA3DO95025 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SEMA3DO95025 AC104108.1-201ENST00000509930 412 ntBASIC2.99□□□□□ -1.93
SEMA3DO95025 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SEMA3DO95025 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.99□□□□□ -1.93
SEMA3DO95025 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.99□□□□□ -1.93
SEMA3DO95025 RNU6-202P-201ENST00000515998 96 ntBASIC2.99□□□□□ -1.93
SEMA3DO95025 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC2.99□□□□□ -1.93
SEMA3DO95025 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.99□□□□□ -1.93
SEMA3DO95025 EIF5A2P1-201ENST00000564027 460 ntBASIC2.99□□□□□ -1.93
SEMA3DO95025 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.99□□□□□ -1.93
SEMA3DO95025 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.99□□□□□ -1.93
SEMA3DO95025 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.99□□□□□ -1.93
SEMA3DO95025 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.99□□□□□ -1.93
SEMA3DO95025 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC2.99□□□□□ -1.93
SEMA3DO95025 AC245100.7-201ENST00000609678 442 ntBASIC2.99□□□□□ -1.93
SEMA3DO95025 AC091948.2-201ENST00000636510 279 ntBASIC2.99□□□□□ -1.93
SEMA3DO95025 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SEMA3DO95025 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SEMA3DO95025 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SEMA3DO95025 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
SEMA3DO95025 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SEMA3DO95025 AC008432.1-201ENST00000615912 1320 ntBASIC2.98□□□□□ -1.93
SEMA3DO95025 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SEMA3DO95025 RNA5SP267-201ENST00000364893 126 ntBASIC2.98□□□□□ -1.93
SEMA3DO95025 RNU6-481P-201ENST00000384194 107 ntBASIC2.98□□□□□ -1.93
SEMA3DO95025 SNORA26.7-201ENST00000391288 122 ntBASIC2.98□□□□□ -1.93
SEMA3DO95025 DSTNP4-201ENST00000399472 474 ntBASIC2.98□□□□□ -1.93
SEMA3DO95025 RPL7P25-201ENST00000404151 721 ntBASIC2.98□□□□□ -1.93
SEMA3DO95025 RN7SKP58-201ENST00000411010 305 ntBASIC2.98□□□□□ -1.93
SEMA3DO95025 RNU6-272P-201ENST00000411028 104 ntBASIC2.98□□□□□ -1.93
SEMA3DO95025 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.98□□□□□ -1.93
SEMA3DO95025 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.98□□□□□ -1.93
SEMA3DO95025 AL158156.1-201ENST00000422509 473 ntBASIC2.98□□□□□ -1.93
SEMA3DO95025 AL121882.1-201ENST00000422893 417 ntBASIC2.98□□□□□ -1.93
SEMA3DO95025 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.98□□□□□ -1.93
SEMA3DO95025 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.98□□□□□ -1.93
SEMA3DO95025 AL513175.1-201ENST00000431492 780 ntBASIC2.98□□□□□ -1.93
SEMA3DO95025 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.98□□□□□ -1.93
SEMA3DO95025 AC006028.1-201ENST00000438379 402 ntBASIC2.98□□□□□ -1.93
SEMA3DO95025 COX6CP2-201ENST00000444980 225 ntBASIC2.98□□□□□ -1.93
SEMA3DO95025 PRDX3P4-201ENST00000470828 747 ntBASIC2.98□□□□□ -1.93
SEMA3DO95025 COL6A4P2-205ENST00000509855 506 ntBASIC2.98□□□□□ -1.93
SEMA3DO95025 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.98□□□□□ -1.93
SEMA3DO95025 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.98□□□□□ -1.93
SEMA3DO95025 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.98□□□□□ -1.93
SEMA3DO95025 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.98□□□□□ -1.93
SEMA3DO95025 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SEMA3DO95025 AC007536.1-201ENST00000533382 349 ntBASIC2.98□□□□□ -1.93
SEMA3DO95025 AP000916.1-201ENST00000533869 835 ntBASIC2.98□□□□□ -1.93
SEMA3DO95025 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.98□□□□□ -1.93
SEMA3DO95025 MIR4504-201ENST00000577413 92 ntBASIC2.98□□□□□ -1.93
SEMA3DO95025 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.98□□□□□ -1.93
SEMA3DO95025 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.98□□□□□ -1.93
SEMA3DO95025 CCDC58P3-201ENST00000590792 430 ntBASIC2.98□□□□□ -1.93
SEMA3DO95025 AC021851.1-201ENST00000608537 1082 ntBASIC2.98□□□□□ -1.93
SEMA3DO95025 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.98□□□□□ -1.93
SEMA3DO95025 AC131902.3-201ENST00000611767 581 ntBASIC2.98□□□□□ -1.93
SEMA3DO95025 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.98□□□□□ -1.93
SEMA3DO95025 AC006213.5-201ENST00000619673 288 ntBASIC2.98□□□□□ -1.93
SEMA3DO95025 AC091046.2-201ENST00000620775 665 ntBASIC2.98□□□□□ -1.93
SEMA3DO95025 AL109659.3-201ENST00000624985 950 ntBASIC2.98□□□□□ -1.93
SEMA3DO95025 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.98□□□□□ -1.93
SEMA3DO95025 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
SEMA3DO95025 AC046144.1-201ENST00000478559 1853 ntBASIC2.98□□□□□ -1.93
SEMA3DO95025 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SEMA3DO95025 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
SEMA3DO95025 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.98□□□□□ -1.93
SEMA3DO95025 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SEMA3DO95025 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SEMA3DO95025 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.97□□□□□ -1.93
SEMA3DO95025 AC024341.1-201ENST00000526444 1552 ntBASIC2.97□□□□□ -1.93
SEMA3DO95025 SNORA51.4-201ENST00000364993 124 ntBASIC2.97□□□□□ -1.93
SEMA3DO95025 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
SEMA3DO95025 SNORA46-201ENST00000384762 135 ntBASIC2.97□□□□□ -1.93
SEMA3DO95025 RNA5SP344-201ENST00000411081 104 ntBASIC2.97□□□□□ -1.93
SEMA3DO95025 ATG3P1-201ENST00000419507 911 ntBASIC2.97□□□□□ -1.93
SEMA3DO95025 Z77249.1-201ENST00000444622 1175 ntBASIC2.97□□□□□ -1.93
SEMA3DO95025 BTF3P5-201ENST00000457252 467 ntBASIC2.97□□□□□ -1.93
SEMA3DO95025 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms