Protein–RNA interactions for Protein: O60393

NOBOX, Homeobox protein NOBOX, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOBOXO60393 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.9□□□□□ -1.63
NOBOXO60393 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.9□□□□□ -1.63
NOBOXO60393 AL136380.1-201ENST00000447970 162 ntBASIC4.9□□□□□ -1.63
NOBOXO60393 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.9□□□□□ -1.63
NOBOXO60393 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC4.9□□□□□ -1.63
NOBOXO60393 Y_RNA.639-201ENST00000458981 102 ntBASIC4.9□□□□□ -1.63
NOBOXO60393 RNU7-27P-201ENST00000459281 62 ntBASIC4.9□□□□□ -1.63
NOBOXO60393 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC4.9□□□□□ -1.63
NOBOXO60393 PCBP2P3-201ENST00000509726 843 ntBASIC4.9□□□□□ -1.63
NOBOXO60393 AC034159.1-201ENST00000513885 583 ntBASIC4.9□□□□□ -1.63
NOBOXO60393 AC090502.2-201ENST00000549267 280 ntBASIC4.9□□□□□ -1.63
NOBOXO60393 SCOCP1-201ENST00000554676 349 ntBASIC4.9□□□□□ -1.63
NOBOXO60393 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
NOBOXO60393 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.9□□□□□ -1.63
NOBOXO60393 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.9□□□□□ -1.63
NOBOXO60393 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.9□□□□□ -1.63
NOBOXO60393 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.9□□□□□ -1.63
NOBOXO60393 AC099489.2-201ENST00000574976 260 ntBASIC4.9□□□□□ -1.63
NOBOXO60393 MIR4742-201ENST00000581069 85 ntBASIC4.9□□□□□ -1.63
NOBOXO60393 AC010525.2-201ENST00000590920 195 ntBASIC4.9□□□□□ -1.63
NOBOXO60393 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.9□□□□□ -1.63
NOBOXO60393 MIR6780A-201ENST00000615089 68 ntBASIC4.9□□□□□ -1.63
NOBOXO60393 AC090617.10-201ENST00000624308 134 ntBASIC4.9□□□□□ -1.63
NOBOXO60393 TTK-211ENST00000627129 240 ntTSL 5 BASIC4.9□□□□□ -1.63
NOBOXO60393 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.9□□□□□ -1.63
NOBOXO60393 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NOBOXO60393 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.9□□□□□ -1.63
NOBOXO60393 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.9□□□□□ -1.63
NOBOXO60393 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.9□□□□□ -1.63
NOBOXO60393 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NOBOXO60393 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NOBOXO60393 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NOBOXO60393 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.89□□□□□ -1.63
NOBOXO60393 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NOBOXO60393 SCARNA15-201ENST00000607520 4325 ntBASIC4.89□□□□□ -1.63
NOBOXO60393 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.89□□□□□ -1.63
NOBOXO60393 NUP58P1-201ENST00000502546 1738 ntBASIC4.89□□□□□ -1.63
NOBOXO60393 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
NOBOXO60393 AC005332.5-201ENST00000591222 2919 ntBASIC4.89□□□□□ -1.63
NOBOXO60393 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.89□□□□□ -1.63
NOBOXO60393 NACAP2-201ENST00000318548 624 ntBASIC4.89□□□□□ -1.63
NOBOXO60393 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
NOBOXO60393 RNA5SP505-201ENST00000364748 108 ntBASIC4.89□□□□□ -1.63
NOBOXO60393 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NOBOXO60393 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NOBOXO60393 RNU6-657P-201ENST00000383904 107 ntBASIC4.89□□□□□ -1.63
NOBOXO60393 RNU6-574P-201ENST00000384265 107 ntBASIC4.89□□□□□ -1.63
NOBOXO60393 HMGB3P7-201ENST00000400214 611 ntBASIC4.89□□□□□ -1.63
NOBOXO60393 RPL7P25-201ENST00000404151 721 ntBASIC4.89□□□□□ -1.63
NOBOXO60393 RPL5P18-201ENST00000406671 891 ntBASIC4.89□□□□□ -1.63
NOBOXO60393 RNU2-28P-201ENST00000410457 189 ntBASIC4.89□□□□□ -1.63
NOBOXO60393 RNU6-1148P-201ENST00000410992 104 ntBASIC4.89□□□□□ -1.63
NOBOXO60393 AF186996.5-201ENST00000418098 904 ntBASIC4.89□□□□□ -1.63
NOBOXO60393 C4BPAP2-201ENST00000428434 478 ntBASIC4.89□□□□□ -1.63
NOBOXO60393 AC016712.1-201ENST00000431088 378 ntBASIC4.89□□□□□ -1.63
NOBOXO60393 RSU1P2-202ENST00000437884 485 ntBASIC4.89□□□□□ -1.63
NOBOXO60393 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.89□□□□□ -1.63
NOBOXO60393 MRPS17P3-201ENST00000465453 385 ntBASIC4.89□□□□□ -1.63
NOBOXO60393 AC090142.1-201ENST00000465776 462 ntBASIC4.89□□□□□ -1.63
NOBOXO60393 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.89□□□□□ -1.63
NOBOXO60393 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.89□□□□□ -1.63
NOBOXO60393 GAPDHP56-201ENST00000506031 988 ntBASIC4.89□□□□□ -1.63
NOBOXO60393 SNORD60.2-201ENST00000516883 86 ntBASIC4.89□□□□□ -1.63
NOBOXO60393 Y_RNA.711-201ENST00000516993 102 ntBASIC4.89□□□□□ -1.63
NOBOXO60393 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.89□□□□□ -1.63
NOBOXO60393 AP006289.1-201ENST00000538089 277 ntBASIC4.89□□□□□ -1.63
NOBOXO60393 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.89□□□□□ -1.63
NOBOXO60393 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.89□□□□□ -1.63
NOBOXO60393 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
NOBOXO60393 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.89□□□□□ -1.63
NOBOXO60393 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.89□□□□□ -1.63
NOBOXO60393 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.89□□□□□ -1.63
NOBOXO60393 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.89□□□□□ -1.63
NOBOXO60393 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.89□□□□□ -1.63
NOBOXO60393 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.89□□□□□ -1.63
NOBOXO60393 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
NOBOXO60393 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.89□□□□□ -1.63
NOBOXO60393 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.89□□□□□ -1.63
NOBOXO60393 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
NOBOXO60393 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
NOBOXO60393 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
NOBOXO60393 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
NOBOXO60393 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NOBOXO60393 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NOBOXO60393 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NOBOXO60393 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NOBOXO60393 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
NOBOXO60393 AC119744.1-201ENST00000454746 1715 ntBASIC4.89□□□□□ -1.63
NOBOXO60393 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NOBOXO60393 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.88□□□□□ -1.63
NOBOXO60393 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
NOBOXO60393 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.88□□□□□ -1.63
NOBOXO60393 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
NOBOXO60393 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NOBOXO60393 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
NOBOXO60393 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
NOBOXO60393 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.88□□□□□ -1.63
NOBOXO60393 RPL7P26-201ENST00000333817 754 ntBASIC4.88□□□□□ -1.63
NOBOXO60393 Y_RNA.46-201ENST00000362695 102 ntBASIC4.88□□□□□ -1.63
NOBOXO60393 Y_RNA.133-201ENST00000363428 110 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms