Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 RNU6-805P-201ENST00000365643 106 ntBASIC3.29□□□□□ -1.88
CHMP2AO43633 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
CHMP2AO43633 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.29□□□□□ -1.88
CHMP2AO43633 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.29□□□□□ -1.88
CHMP2AO43633 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.29□□□□□ -1.88
CHMP2AO43633 AL139132.1-201ENST00000431587 344 ntBASIC3.29□□□□□ -1.88
CHMP2AO43633 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.29□□□□□ -1.88
CHMP2AO43633 RABEPKP1-201ENST00000440529 1026 ntBASIC3.29□□□□□ -1.88
CHMP2AO43633 AC114878.1-201ENST00000441166 358 ntBASIC3.29□□□□□ -1.88
CHMP2AO43633 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.29□□□□□ -1.88
CHMP2AO43633 AL162389.1-201ENST00000449233 177 ntBASIC3.29□□□□□ -1.88
CHMP2AO43633 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.29□□□□□ -1.88
CHMP2AO43633 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CHMP2AO43633 GMPSP1-201ENST00000514075 579 ntBASIC3.29□□□□□ -1.88
CHMP2AO43633 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.29□□□□□ -1.88
CHMP2AO43633 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.29□□□□□ -1.88
CHMP2AO43633 SNORA31.20-201ENST00000517111 133 ntBASIC3.29□□□□□ -1.88
CHMP2AO43633 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.29□□□□□ -1.88
CHMP2AO43633 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.29□□□□□ -1.88
CHMP2AO43633 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.29□□□□□ -1.88
CHMP2AO43633 AL137843.1-201ENST00000605078 385 ntBASIC3.29□□□□□ -1.88
CHMP2AO43633 CYCSP41-201ENST00000616920 296 ntBASIC3.29□□□□□ -1.88
CHMP2AO43633 AL356118.1-201ENST00000635272 1078 ntBASIC3.29□□□□□ -1.88
CHMP2AO43633 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.29□□□□□ -1.88
CHMP2AO43633 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CHMP2AO43633 AC073055.1-201ENST00000456901 1621 ntBASIC3.29□□□□□ -1.88
CHMP2AO43633 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
CHMP2AO43633 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CHMP2AO43633 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.28□□□□□ -1.88
CHMP2AO43633 AL645568.2-201ENST00000432815 1337 ntBASIC3.28□□□□□ -1.88
CHMP2AO43633 AL122016.1-201ENST00000403365 367 ntBASIC3.28□□□□□ -1.88
CHMP2AO43633 HMGB3P23-201ENST00000414981 585 ntBASIC3.28□□□□□ -1.88
CHMP2AO43633 MRPL50P2-201ENST00000416821 482 ntBASIC3.28□□□□□ -1.88
CHMP2AO43633 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.28□□□□□ -1.88
CHMP2AO43633 RPL23AP22-201ENST00000437556 453 ntBASIC3.28□□□□□ -1.88
CHMP2AO43633 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.28□□□□□ -1.88
CHMP2AO43633 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.28□□□□□ -1.88
CHMP2AO43633 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.28□□□□□ -1.88
CHMP2AO43633 NPM1P13-201ENST00000452663 865 ntBASIC3.28□□□□□ -1.88
CHMP2AO43633 RPS24P6-201ENST00000452670 400 ntBASIC3.28□□□□□ -1.88
CHMP2AO43633 MTCO3P35-201ENST00000485582 781 ntBASIC3.28□□□□□ -1.88
CHMP2AO43633 AC092185.1-201ENST00000491371 97 ntBASIC3.28□□□□□ -1.88
CHMP2AO43633 AC021146.5-201ENST00000503544 545 ntBASIC3.28□□□□□ -1.88
CHMP2AO43633 AC111000.2-201ENST00000507775 550 ntBASIC3.28□□□□□ -1.88
CHMP2AO43633 MTND4LP22-201ENST00000508209 276 ntBASIC3.28□□□□□ -1.88
CHMP2AO43633 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC3.28□□□□□ -1.88
CHMP2AO43633 AC245166.1-201ENST00000521012 253 ntBASIC3.28□□□□□ -1.88
CHMP2AO43633 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.28□□□□□ -1.88
CHMP2AO43633 AC005951.1-201ENST00000576706 485 ntBASIC3.28□□□□□ -1.88
CHMP2AO43633 MIR4474-201ENST00000579189 78 ntBASIC3.28□□□□□ -1.88
CHMP2AO43633 LARP7P3-201ENST00000579888 337 ntBASIC3.28□□□□□ -1.88
CHMP2AO43633 AC022509.4-201ENST00000621404 572 ntBASIC3.28□□□□□ -1.88
CHMP2AO43633 AC009039.2-201ENST00000624524 529 ntBASIC3.28□□□□□ -1.88
CHMP2AO43633 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.28□□□□□ -1.88
CHMP2AO43633 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.89
CHMP2AO43633 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.27□□□□□ -1.89
CHMP2AO43633 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CHMP2AO43633 OR5T3-201ENST00000303059 1023 ntBASIC3.27□□□□□ -1.89
CHMP2AO43633 MIR148B-201ENST00000362252 99 ntBASIC3.27□□□□□ -1.89
CHMP2AO43633 SNORA9.2-201ENST00000365361 133 ntBASIC3.27□□□□□ -1.89
CHMP2AO43633 MT-TC-201ENST00000387405 66 ntBASIC3.27□□□□□ -1.89
CHMP2AO43633 U3.42-201ENST00000408746 214 ntBASIC3.27□□□□□ -1.89
CHMP2AO43633 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.27□□□□□ -1.89
CHMP2AO43633 YPEL5P1-201ENST00000419731 367 ntBASIC3.27□□□□□ -1.89
CHMP2AO43633 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.27□□□□□ -1.89
CHMP2AO43633 RPL7P46-201ENST00000425129 740 ntBASIC3.27□□□□□ -1.89
CHMP2AO43633 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CHMP2AO43633 TRIM60P13-201ENST00000432350 1283 ntBASIC3.27□□□□□ -1.89
CHMP2AO43633 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.27□□□□□ -1.89
CHMP2AO43633 RPS15AP1-201ENST00000457423 391 ntBASIC3.27□□□□□ -1.89
CHMP2AO43633 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.27□□□□□ -1.89
CHMP2AO43633 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.27□□□□□ -1.89
CHMP2AO43633 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.27□□□□□ -1.89
CHMP2AO43633 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.27□□□□□ -1.89
CHMP2AO43633 AC093278.1-201ENST00000494700 600 ntBASIC3.27□□□□□ -1.89
CHMP2AO43633 AC083906.5-201ENST00000503722 328 ntBASIC3.27□□□□□ -1.89
CHMP2AO43633 KCTD9P5-201ENST00000504141 1170 ntBASIC3.27□□□□□ -1.89
CHMP2AO43633 AC083923.1-201ENST00000523708 376 ntBASIC3.27□□□□□ -1.89
CHMP2AO43633 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.27□□□□□ -1.89
CHMP2AO43633 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.27□□□□□ -1.89
CHMP2AO43633 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CHMP2AO43633 VN1R92P-201ENST00000598511 928 ntBASIC3.27□□□□□ -1.89
CHMP2AO43633 BNIP3P19-201ENST00000605397 577 ntBASIC3.27□□□□□ -1.89
CHMP2AO43633 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.27□□□□□ -1.89
CHMP2AO43633 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.27□□□□□ -1.89
CHMP2AO43633 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.27□□□□□ -1.89
CHMP2AO43633 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.27□□□□□ -1.89
CHMP2AO43633 MTND5P27-201ENST00000428871 1720 ntBASIC3.27□□□□□ -1.89
CHMP2AO43633 ZNF90P1-201ENST00000480493 1951 ntBASIC3.27□□□□□ -1.89
CHMP2AO43633 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CHMP2AO43633 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CHMP2AO43633 SNORA18.3-201ENST00000384122 132 ntBASIC3.26□□□□□ -1.89
CHMP2AO43633 TAF9BP2-201ENST00000400856 499 ntBASIC3.26□□□□□ -1.89
CHMP2AO43633 AC092745.2-202ENST00000411880 369 ntBASIC3.26□□□□□ -1.89
CHMP2AO43633 AC109780.2-201ENST00000413467 845 ntBASIC3.26□□□□□ -1.89
CHMP2AO43633 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CHMP2AO43633 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.26□□□□□ -1.89
CHMP2AO43633 RAB11AP1-201ENST00000442978 646 ntBASIC3.26□□□□□ -1.89
CHMP2AO43633 RPL17P49-201ENST00000443728 411 ntBASIC3.26□□□□□ -1.89
CHMP2AO43633 AL035407.2-201ENST00000454090 378 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms