Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AC010493.1-201ENST00000513479 292 ntBASIC4.45□□□□□ -1.7
PROM1O43490 IGKV1-32-201ENST00000519290 311 ntBASIC4.45□□□□□ -1.7
PROM1O43490 AP003467.2-201ENST00000520175 319 ntBASIC4.45□□□□□ -1.7
PROM1O43490 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.45□□□□□ -1.7
PROM1O43490 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.45□□□□□ -1.7
PROM1O43490 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.45□□□□□ -1.7
PROM1O43490 ADI1P3-201ENST00000549509 470 ntBASIC4.45□□□□□ -1.7
PROM1O43490 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.45□□□□□ -1.7
PROM1O43490 AL157394.1-201ENST00000562983 1224 ntBASIC4.45□□□□□ -1.7
PROM1O43490 RN7SL652P-201ENST00000577769 300 ntBASIC4.45□□□□□ -1.7
PROM1O43490 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.45□□□□□ -1.7
PROM1O43490 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.45□□□□□ -1.7
PROM1O43490 AL359999.1-201ENST00000604513 294 ntBASIC4.45□□□□□ -1.7
PROM1O43490 BCRP9-201ENST00000605312 388 ntBASIC4.45□□□□□ -1.7
PROM1O43490 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.45□□□□□ -1.7
PROM1O43490 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.45□□□□□ -1.7
PROM1O43490 AC104985.2-201ENST00000620598 500 ntBASIC4.45□□□□□ -1.7
PROM1O43490 AL359880.1-201ENST00000621879 266 ntBASIC4.45□□□□□ -1.7
PROM1O43490 AC140113.4-201ENST00000622087 222 ntBASIC4.45□□□□□ -1.7
PROM1O43490 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PROM1O43490 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PROM1O43490 AC025031.4-201ENST00000621248 3271 ntBASIC4.45□□□□□ -1.7
PROM1O43490 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PROM1O43490 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
PROM1O43490 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PROM1O43490 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PROM1O43490 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PROM1O43490 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PROM1O43490 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PROM1O43490 RPL32P3-201ENST00000359025 275 ntBASIC4.44□□□□□ -1.7
PROM1O43490 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.44□□□□□ -1.7
PROM1O43490 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PROM1O43490 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PROM1O43490 Y_RNA.402-201ENST00000383972 102 ntBASIC4.44□□□□□ -1.7
PROM1O43490 RNU6-441P-201ENST00000384545 106 ntBASIC4.44□□□□□ -1.7
PROM1O43490 RNU6-780P-201ENST00000391030 104 ntBASIC4.44□□□□□ -1.7
PROM1O43490 RNU6-952P-201ENST00000391164 108 ntBASIC4.44□□□□□ -1.7
PROM1O43490 EIF5P1-201ENST00000400019 1231 ntBASIC4.44□□□□□ -1.7
PROM1O43490 AL121834.1-202ENST00000404494 277 ntBASIC4.44□□□□□ -1.7
PROM1O43490 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.44□□□□□ -1.7
PROM1O43490 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.44□□□□□ -1.7
PROM1O43490 AL139413.1-201ENST00000421309 217 ntBASIC4.44□□□□□ -1.7
PROM1O43490 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.44□□□□□ -1.7
PROM1O43490 MTND4P28-201ENST00000426217 387 ntBASIC4.44□□□□□ -1.7
PROM1O43490 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.44□□□□□ -1.7
PROM1O43490 AC073464.1-201ENST00000429823 534 ntBASIC4.44□□□□□ -1.7
PROM1O43490 RPL36P19-201ENST00000430744 301 ntBASIC4.44□□□□□ -1.7
PROM1O43490 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.44□□□□□ -1.7
PROM1O43490 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.44□□□□□ -1.7
PROM1O43490 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PROM1O43490 RPL23AP16-201ENST00000441715 421 ntBASIC4.44□□□□□ -1.7
PROM1O43490 H2AFZP5-201ENST00000446960 382 ntBASIC4.44□□□□□ -1.7
PROM1O43490 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.44□□□□□ -1.7
PROM1O43490 RN7SL817P-201ENST00000480777 288 ntBASIC4.44□□□□□ -1.7
PROM1O43490 RPS3AP14-201ENST00000483907 780 ntBASIC4.44□□□□□ -1.7
PROM1O43490 MTND1P3-201ENST00000484956 952 ntBASIC4.44□□□□□ -1.7
PROM1O43490 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.44□□□□□ -1.7
PROM1O43490 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.44□□□□□ -1.7
PROM1O43490 AC110792.2-201ENST00000510278 224 ntBASIC4.44□□□□□ -1.7
PROM1O43490 AC105914.1-201ENST00000511798 226 ntBASIC4.44□□□□□ -1.7
PROM1O43490 AC114781.4-201ENST00000513707 639 ntBASIC4.44□□□□□ -1.7
PROM1O43490 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.44□□□□□ -1.7
PROM1O43490 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.44□□□□□ -1.7
PROM1O43490 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.44□□□□□ -1.7
PROM1O43490 OR5AQ1P-201ENST00000527596 927 ntBASIC4.44□□□□□ -1.7
PROM1O43490 OR5AP1P-201ENST00000529730 940 ntBASIC4.44□□□□□ -1.7
PROM1O43490 TOMM20P2-201ENST00000540082 421 ntBASIC4.44□□□□□ -1.7
PROM1O43490 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.44□□□□□ -1.7
PROM1O43490 LARP7P2-201ENST00000575306 125 ntBASIC4.44□□□□□ -1.7
PROM1O43490 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.44□□□□□ -1.7
PROM1O43490 AC091042.1-201ENST00000579213 173 ntBASIC4.44□□□□□ -1.7
PROM1O43490 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.44□□□□□ -1.7
PROM1O43490 AC005730.3-201ENST00000583067 366 ntBASIC4.44□□□□□ -1.7
PROM1O43490 BBIP1P1-201ENST00000602999 279 ntBASIC4.44□□□□□ -1.7
PROM1O43490 AC099669.2-201ENST00000616549 437 ntBASIC4.44□□□□□ -1.7
PROM1O43490 MIR6853-201ENST00000619642 74 ntBASIC4.44□□□□□ -1.7
PROM1O43490 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.44□□□□□ -1.7
PROM1O43490 PISRT1-201ENST00000626175 531 ntBASIC4.44□□□□□ -1.7
PROM1O43490 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.44□□□□□ -1.7
PROM1O43490 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.44□□□□□ -1.7
PROM1O43490 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
PROM1O43490 ZNF33CP-201ENST00000432492 2030 ntBASIC4.44□□□□□ -1.7
PROM1O43490 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.44□□□□□ -1.7
PROM1O43490 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
PROM1O43490 AL136164.3-201ENST00000624429 3978 ntBASIC4.44□□□□□ -1.7
PROM1O43490 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PROM1O43490 OR14L1P-202ENST00000641545 3009 ntBASIC4.43□□□□□ -1.7
PROM1O43490 AC125257.1-201ENST00000560400 2930 ntBASIC4.43□□□□□ -1.7
PROM1O43490 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
PROM1O43490 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PROM1O43490 OR4K15-201ENST00000305051 1216 ntBASIC4.43□□□□□ -1.7
PROM1O43490 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PROM1O43490 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.43□□□□□ -1.7
PROM1O43490 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PROM1O43490 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PROM1O43490 RNU6-1090P-201ENST00000364065 94 ntBASIC4.43□□□□□ -1.7
PROM1O43490 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.43□□□□□ -1.7
PROM1O43490 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PROM1O43490 MIR649-201ENST00000384843 97 ntBASIC4.43□□□□□ -1.7
PROM1O43490 RNU6-876P-201ENST00000391295 104 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms