Protein–RNA interactions for Protein: O43248

HOXC11, Homeobox protein Hox-C11, humanhuman

Predicted RBP Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11O43248 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.21□□□□□ -1.74
HOXC11O43248 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.21□□□□□ -1.74
HOXC11O43248 AC018816.2-201ENST00000621460 353 ntBASIC4.21□□□□□ -1.74
HOXC11O43248 MIR4727-201ENST00000622232 55 ntBASIC4.21□□□□□ -1.74
HOXC11O43248 AL356596.1-201ENST00000624230 379 ntBASIC4.21□□□□□ -1.74
HOXC11O43248 AC009039.2-201ENST00000624524 529 ntBASIC4.21□□□□□ -1.74
HOXC11O43248 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.21□□□□□ -1.74
HOXC11O43248 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.21□□□□□ -1.74
HOXC11O43248 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.21□□□□□ -1.74
HOXC11O43248 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
HOXC11O43248 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HOXC11O43248 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.21□□□□□ -1.74
HOXC11O43248 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HOXC11O43248 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HOXC11O43248 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HOXC11O43248 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
HOXC11O43248 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
HOXC11O43248 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
HOXC11O43248 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
HOXC11O43248 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HOXC11O43248 AP001350.1-201ENST00000601906 1524 ntBASIC4.21□□□□□ -1.74
HOXC11O43248 AC011477.1-204ENST00000623416 1325 ntBASIC4.21□□□□□ -1.74
HOXC11O43248 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.2□□□□□ -1.74
HOXC11O43248 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXC11O43248 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
HOXC11O43248 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.2□□□□□ -1.74
HOXC11O43248 AC066616.2-201ENST00000559334 1481 ntBASIC4.2□□□□□ -1.74
HOXC11O43248 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXC11O43248 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
HOXC11O43248 SNORA31-201ENST00000362607 130 ntBASIC4.2□□□□□ -1.74
HOXC11O43248 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.2□□□□□ -1.74
HOXC11O43248 RNU5A-2P-201ENST00000384337 116 ntBASIC4.2□□□□□ -1.74
HOXC11O43248 MIR607-201ENST00000385241 96 ntBASIC4.2□□□□□ -1.74
HOXC11O43248 RN7SKP159-201ENST00000410657 292 ntBASIC4.2□□□□□ -1.74
HOXC11O43248 RNU4-6P-201ENST00000410804 122 ntBASIC4.2□□□□□ -1.74
HOXC11O43248 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXC11O43248 AL593851.1-201ENST00000426171 157 ntBASIC4.2□□□□□ -1.74
HOXC11O43248 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.2□□□□□ -1.74
HOXC11O43248 RPL7P34-201ENST00000433316 712 ntBASIC4.2□□□□□ -1.74
HOXC11O43248 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
HOXC11O43248 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.2□□□□□ -1.74
HOXC11O43248 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.2□□□□□ -1.74
HOXC11O43248 SNORA84-201ENST00000459229 133 ntBASIC4.2□□□□□ -1.74
HOXC11O43248 AC072039.1-201ENST00000477611 581 ntBASIC4.2□□□□□ -1.74
HOXC11O43248 RN7SL132P-201ENST00000478131 296 ntBASIC4.2□□□□□ -1.74
HOXC11O43248 AC106872.2-201ENST00000494303 480 ntBASIC4.2□□□□□ -1.74
HOXC11O43248 AC068305.1-201ENST00000497406 726 ntBASIC4.2□□□□□ -1.74
HOXC11O43248 AC139783.2-201ENST00000504847 1145 ntBASIC4.2□□□□□ -1.74
HOXC11O43248 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HOXC11O43248 NPM1P41-201ENST00000512920 831 ntBASIC4.2□□□□□ -1.74
HOXC11O43248 MTND4LP31-201ENST00000514859 294 ntBASIC4.2□□□□□ -1.74
HOXC11O43248 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.2□□□□□ -1.74
HOXC11O43248 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.2□□□□□ -1.74
HOXC11O43248 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.2□□□□□ -1.74
HOXC11O43248 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.2□□□□□ -1.74
HOXC11O43248 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
HOXC11O43248 AC008015.1-201ENST00000555505 465 ntBASIC4.2□□□□□ -1.74
HOXC11O43248 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.2□□□□□ -1.74
HOXC11O43248 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.2□□□□□ -1.74
HOXC11O43248 AL606490.9-201ENST00000603331 271 ntBASIC4.2□□□□□ -1.74
HOXC11O43248 DUXAP11-201ENST00000603858 526 ntBASIC4.2□□□□□ -1.74
HOXC11O43248 AC004853.1-201ENST00000604902 698 ntBASIC4.2□□□□□ -1.74
HOXC11O43248 AC018638.7-201ENST00000605836 1114 ntBASIC4.2□□□□□ -1.74
HOXC11O43248 AC072039.2-201ENST00000608883 439 ntBASIC4.2□□□□□ -1.74
HOXC11O43248 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HOXC11O43248 MIR6500-201ENST00000622700 86 ntBASIC4.2□□□□□ -1.74
HOXC11O43248 AL356585.4-201ENST00000623078 1229 ntBASIC4.2□□□□□ -1.74
HOXC11O43248 AP003485.2-201ENST00000623636 610 ntBASIC4.2□□□□□ -1.74
HOXC11O43248 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXC11O43248 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
HOXC11O43248 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.2□□□□□ -1.74
HOXC11O43248 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXC11O43248 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.2□□□□□ -1.74
HOXC11O43248 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
HOXC11O43248 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HOXC11O43248 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.2□□□□□ -1.74
HOXC11O43248 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
HOXC11O43248 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.19□□□□□ -1.74
HOXC11O43248 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.19□□□□□ -1.74
HOXC11O43248 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HOXC11O43248 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HOXC11O43248 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HOXC11O43248 SNORD3H-201ENST00000384486 214 ntBASIC4.19□□□□□ -1.74
HOXC11O43248 RPS3AP26-201ENST00000398259 784 ntBASIC4.19□□□□□ -1.74
HOXC11O43248 MIR1183-201ENST00000408856 89 ntBASIC4.19□□□□□ -1.74
HOXC11O43248 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.19□□□□□ -1.74
HOXC11O43248 AL137014.1-201ENST00000420490 1226 ntBASIC4.19□□□□□ -1.74
HOXC11O43248 AC099677.1-201ENST00000420575 175 ntBASIC4.19□□□□□ -1.74
HOXC11O43248 OR5BE1P-201ENST00000425977 939 ntBASIC4.19□□□□□ -1.74
HOXC11O43248 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.19□□□□□ -1.74
HOXC11O43248 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.19□□□□□ -1.74
HOXC11O43248 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.19□□□□□ -1.74
HOXC11O43248 MTCYBP45-201ENST00000435243 565 ntBASIC4.19□□□□□ -1.74
HOXC11O43248 RPS29P7-201ENST00000439662 171 ntBASIC4.19□□□□□ -1.74
HOXC11O43248 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.19□□□□□ -1.74
HOXC11O43248 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.19□□□□□ -1.74
HOXC11O43248 ARPC3P2-201ENST00000457786 533 ntBASIC4.19□□□□□ -1.74
HOXC11O43248 RN7SL542P-201ENST00000467147 294 ntBASIC4.19□□□□□ -1.74
HOXC11O43248 RPL29P14-201ENST00000495837 428 ntBASIC4.19□□□□□ -1.74
HOXC11O43248 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms