Protein–RNA interactions for Protein: O15240

VGF, Neurosecretory protein VGF, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGFO15240 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC8.11□□□□□ -1.11
VGFO15240 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC8.11□□□□□ -1.11
VGFO15240 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC8.11□□□□□ -1.11
VGFO15240 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
VGFO15240 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
VGFO15240 CPS1-IT1-201ENST00000628368 2306 ntBASIC8.11□□□□□ -1.11
VGFO15240 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
VGFO15240 AC079753.1-201ENST00000623243 3868 ntBASIC8.1□□□□□ -1.11
VGFO15240 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
VGFO15240 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
VGFO15240 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
VGFO15240 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
VGFO15240 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
VGFO15240 AC007938.2-201ENST00000604666 2634 ntBASIC8.1□□□□□ -1.11
VGFO15240 PABPC1P7-201ENST00000413177 1513 ntBASIC8.1□□□□□ -1.11
VGFO15240 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
VGFO15240 Y_RNA.64-201ENST00000362845 102 ntBASIC8.1□□□□□ -1.11
VGFO15240 RNU6-393P-201ENST00000384475 107 ntBASIC8.1□□□□□ -1.11
VGFO15240 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
VGFO15240 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
VGFO15240 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
VGFO15240 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC8.1□□□□□ -1.11
VGFO15240 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC8.1□□□□□ -1.11
VGFO15240 RPS23P2-201ENST00000463671 415 ntBASIC8.1□□□□□ -1.11
VGFO15240 RPS4XP1-201ENST00000482189 787 ntBASIC8.1□□□□□ -1.11
VGFO15240 COX6B1P2-201ENST00000489624 230 ntBASIC8.1□□□□□ -1.11
VGFO15240 GAPDHP62-201ENST00000515313 990 ntBASIC8.1□□□□□ -1.11
VGFO15240 SNORA40.15-201ENST00000516884 107 ntBASIC8.1□□□□□ -1.11
VGFO15240 SETP7-201ENST00000552169 453 ntBASIC8.1□□□□□ -1.11
VGFO15240 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC8.1□□□□□ -1.11
VGFO15240 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC8.1□□□□□ -1.11
VGFO15240 AC005341.1-201ENST00000571086 708 ntBASIC8.1□□□□□ -1.11
VGFO15240 HMGB2P1-201ENST00000591146 634 ntBASIC8.1□□□□□ -1.11
VGFO15240 AC012616.1-201ENST00000600294 197 ntBASIC8.1□□□□□ -1.11
VGFO15240 AL031176.1-201ENST00000604554 466 ntBASIC8.1□□□□□ -1.11
VGFO15240 WWOX-217ENST00000620008 450 ntTSL 2 BASIC8.1□□□□□ -1.11
VGFO15240 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC8.1□□□□□ -1.11
VGFO15240 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
VGFO15240 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
VGFO15240 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
VGFO15240 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC8.1□□□□□ -1.11
VGFO15240 AL034546.1-201ENST00000623740 3693 ntBASIC8.1□□□□□ -1.11
VGFO15240 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC8.1□□□□□ -1.11
VGFO15240 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
VGFO15240 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
VGFO15240 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
VGFO15240 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
VGFO15240 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
VGFO15240 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC8.09□□□□□ -1.11
VGFO15240 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
VGFO15240 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC8.09□□□□□ -1.11
VGFO15240 XIAPP3-201ENST00000312918 795 ntBASIC8.09□□□□□ -1.11
VGFO15240 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
VGFO15240 Y_RNA.150-201ENST00000363562 102 ntBASIC8.09□□□□□ -1.11
VGFO15240 Y_RNA.270-201ENST00000364693 104 ntBASIC8.09□□□□□ -1.11
VGFO15240 RNU6-190P-201ENST00000384154 102 ntBASIC8.09□□□□□ -1.11
VGFO15240 MIR130A-201ENST00000385274 89 ntBASIC8.09□□□□□ -1.11
VGFO15240 AC005042.1-201ENST00000393397 800 ntBASIC8.09□□□□□ -1.11
VGFO15240 AL645927.1-201ENST00000396783 406 ntBASIC8.09□□□□□ -1.11
VGFO15240 AL358176.3-201ENST00000420757 454 ntBASIC8.09□□□□□ -1.11
VGFO15240 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC8.09□□□□□ -1.11
VGFO15240 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC8.09□□□□□ -1.11
VGFO15240 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC8.09□□□□□ -1.11
VGFO15240 RPS3AP12-201ENST00000443616 753 ntBASIC8.09□□□□□ -1.11
VGFO15240 AC243772.1-201ENST00000451620 410 ntBASIC8.09□□□□□ -1.11
VGFO15240 MTCO3P8-201ENST00000453691 755 ntBASIC8.09□□□□□ -1.11
VGFO15240 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC8.09□□□□□ -1.11
VGFO15240 AC072052.1-201ENST00000496556 306 ntBASIC8.09□□□□□ -1.11
VGFO15240 IGKV1OR2-1-201ENST00000514060 354 ntBASIC8.09□□□□□ -1.11
VGFO15240 SNORA25.11-201ENST00000515935 105 ntBASIC8.09□□□□□ -1.11
VGFO15240 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC8.09□□□□□ -1.11
VGFO15240 MIR5188-201ENST00000583467 113 ntBASIC8.09□□□□□ -1.11
VGFO15240 IGKV1OR2-118-201ENST00000603238 347 ntBASIC8.09□□□□□ -1.11
VGFO15240 AC010201.1-201ENST00000605051 540 ntBASIC8.09□□□□□ -1.11
VGFO15240 HMGN2P28-201ENST00000606102 262 ntBASIC8.09□□□□□ -1.11
VGFO15240 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC8.09□□□□□ -1.11
VGFO15240 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
VGFO15240 EXOC5P1-201ENST00000510543 1969 ntBASIC8.09□□□□□ -1.11
VGFO15240 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
VGFO15240 AC112243.1-201ENST00000623949 3851 ntBASIC8.09□□□□□ -1.11
VGFO15240 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
VGFO15240 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC8.08□□□□□ -1.12
VGFO15240 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
VGFO15240 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
VGFO15240 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
VGFO15240 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
VGFO15240 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
VGFO15240 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
VGFO15240 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
VGFO15240 Y_RNA.126-201ENST00000363382 111 ntBASIC8.08□□□□□ -1.12
VGFO15240 RNU6-214P-201ENST00000384130 107 ntBASIC8.08□□□□□ -1.12
VGFO15240 RNU6-434P-201ENST00000384376 107 ntBASIC8.08□□□□□ -1.12
VGFO15240 AC097374.1-203ENST00000400783 485 ntBASIC8.08□□□□□ -1.12
VGFO15240 RNU6ATAC18P-201ENST00000408413 101 ntBASIC8.08□□□□□ -1.12
VGFO15240 RPL23AP27-201ENST00000415161 451 ntBASIC8.08□□□□□ -1.12
VGFO15240 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC8.08□□□□□ -1.12
VGFO15240 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC8.08□□□□□ -1.12
VGFO15240 RHOT1P3-201ENST00000436571 331 ntBASIC8.08□□□□□ -1.12
VGFO15240 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC8.08□□□□□ -1.12
VGFO15240 NOTCH2P1-201ENST00000443481 624 ntBASIC8.08□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms