Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 HMGN2P20-201ENST00000437531 273 ntBASIC2.67□□□□□ -1.98
UBFD1O14562 XKRYP6-201ENST00000440468 1116 ntBASIC2.67□□□□□ -1.98
UBFD1O14562 XKRYP3-201ENST00000442113 1116 ntBASIC2.67□□□□□ -1.98
UBFD1O14562 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC2.67□□□□□ -1.98
UBFD1O14562 TPTE2P6-202ENST00000445572 1007 ntBASIC2.67□□□□□ -1.98
UBFD1O14562 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
UBFD1O14562 FTH1P25-201ENST00000447665 469 ntBASIC2.67□□□□□ -1.98
UBFD1O14562 AC112492.1-201ENST00000449607 712 ntBASIC2.67□□□□□ -1.98
UBFD1O14562 MRPL35P4-201ENST00000453682 566 ntBASIC2.67□□□□□ -1.98
UBFD1O14562 AC090525.1-201ENST00000479116 478 ntBASIC2.67□□□□□ -1.98
UBFD1O14562 SUMO1P1-201ENST00000497904 306 ntBASIC2.67□□□□□ -1.98
UBFD1O14562 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.67□□□□□ -1.98
UBFD1O14562 HMGB3P15-201ENST00000507326 574 ntBASIC2.67□□□□□ -1.98
UBFD1O14562 AC010374.2-201ENST00000512933 535 ntBASIC2.67□□□□□ -1.98
UBFD1O14562 AC026801.2-201ENST00000515352 425 ntBASIC2.67□□□□□ -1.98
UBFD1O14562 IGKV2-36-201ENST00000519999 223 ntBASIC2.67□□□□□ -1.98
UBFD1O14562 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.67□□□□□ -1.98
UBFD1O14562 AC074029.2-201ENST00000551045 634 ntBASIC2.67□□□□□ -1.98
UBFD1O14562 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.67□□□□□ -1.98
UBFD1O14562 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.67□□□□□ -1.98
UBFD1O14562 MIR4474-201ENST00000579189 78 ntBASIC2.67□□□□□ -1.98
UBFD1O14562 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.67□□□□□ -1.98
UBFD1O14562 AC024153.1-201ENST00000603103 365 ntBASIC2.67□□□□□ -1.98
UBFD1O14562 AC006023.1-201ENST00000603944 259 ntBASIC2.67□□□□□ -1.98
UBFD1O14562 AL627309.6-201ENST00000606857 840 ntBASIC2.67□□□□□ -1.98
UBFD1O14562 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
UBFD1O14562 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
UBFD1O14562 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.67□□□□□ -1.98
UBFD1O14562 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
UBFD1O14562 AC000403.1-201ENST00000613696 3585 ntBASIC2.67□□□□□ -1.98
UBFD1O14562 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
UBFD1O14562 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.67□□□□□ -1.98
UBFD1O14562 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.66□□□□□ -1.98
UBFD1O14562 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
UBFD1O14562 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
UBFD1O14562 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.66□□□□□ -1.98
UBFD1O14562 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
UBFD1O14562 Z82195.2-201ENST00000612348 18351 ntBASIC2.66□□□□□ -1.98
UBFD1O14562 RNA5SP189-201ENST00000364920 115 ntBASIC2.66□□□□□ -1.98
UBFD1O14562 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.66□□□□□ -1.98
UBFD1O14562 SNORA18.3-201ENST00000384122 132 ntBASIC2.66□□□□□ -1.98
UBFD1O14562 RPL23AP47-201ENST00000408017 460 ntBASIC2.66□□□□□ -1.98
UBFD1O14562 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.66□□□□□ -1.98
UBFD1O14562 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.66□□□□□ -1.98
UBFD1O14562 DNAJC19P8-201ENST00000452887 259 ntBASIC2.66□□□□□ -1.98
UBFD1O14562 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC2.66□□□□□ -1.98
UBFD1O14562 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.66□□□□□ -1.98
UBFD1O14562 KC877373.1-201ENST00000479066 408 ntBASIC2.66□□□□□ -1.98
UBFD1O14562 RN7SL499P-201ENST00000481141 276 ntBASIC2.66□□□□□ -1.98
UBFD1O14562 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.66□□□□□ -1.98
UBFD1O14562 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.66□□□□□ -1.98
UBFD1O14562 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.66□□□□□ -1.98
UBFD1O14562 AC104986.1-201ENST00000517978 436 ntBASIC2.66□□□□□ -1.98
UBFD1O14562 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.66□□□□□ -1.98
UBFD1O14562 ELOCP31-201ENST00000540463 467 ntBASIC2.66□□□□□ -1.98
UBFD1O14562 AP005205.1-201ENST00000563503 508 ntBASIC2.66□□□□□ -1.98
UBFD1O14562 CYCSP39-201ENST00000565821 309 ntBASIC2.66□□□□□ -1.98
UBFD1O14562 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC2.66□□□□□ -1.98
UBFD1O14562 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC2.66□□□□□ -1.98
UBFD1O14562 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.66□□□□□ -1.98
UBFD1O14562 AC131902.3-201ENST00000611767 581 ntBASIC2.66□□□□□ -1.98
UBFD1O14562 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.66□□□□□ -1.98
UBFD1O14562 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
UBFD1O14562 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
UBFD1O14562 AL645568.2-201ENST00000432815 1337 ntBASIC2.66□□□□□ -1.98
UBFD1O14562 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
UBFD1O14562 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
UBFD1O14562 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.66□□□□□ -1.98
UBFD1O14562 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.66□□□□□ -1.98
UBFD1O14562 MTCO1P24-201ENST00000515438 1558 ntBASIC2.66□□□□□ -1.98
UBFD1O14562 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.98
UBFD1O14562 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
UBFD1O14562 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.65□□□□□ -1.98
UBFD1O14562 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
UBFD1O14562 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.65□□□□□ -1.98
UBFD1O14562 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
UBFD1O14562 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.99
UBFD1O14562 RNU6-819P-201ENST00000364116 107 ntBASIC2.65□□□□□ -1.99
UBFD1O14562 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC2.65□□□□□ -1.99
UBFD1O14562 AL592148.1-201ENST00000413568 445 ntBASIC2.65□□□□□ -1.99
UBFD1O14562 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
UBFD1O14562 RPL21P40-201ENST00000428586 483 ntBASIC2.65□□□□□ -1.99
UBFD1O14562 AC104332.2-201ENST00000429959 156 ntBASIC2.65□□□□□ -1.99
UBFD1O14562 RPS20P5-201ENST00000434808 360 ntBASIC2.65□□□□□ -1.99
UBFD1O14562 RPL36AP6-201ENST00000435770 321 ntBASIC2.65□□□□□ -1.99
UBFD1O14562 RPL23AP74-201ENST00000437246 471 ntBASIC2.65□□□□□ -1.99
UBFD1O14562 AC107083.1-201ENST00000439643 279 ntBASIC2.65□□□□□ -1.99
UBFD1O14562 RPL34P26-201ENST00000445636 354 ntBASIC2.65□□□□□ -1.99
UBFD1O14562 NPM1P49-201ENST00000448027 714 ntBASIC2.65□□□□□ -1.99
UBFD1O14562 AL590639.1-201ENST00000456484 337 ntBASIC2.65□□□□□ -1.99
UBFD1O14562 MTND3P6-201ENST00000485242 339 ntBASIC2.65□□□□□ -1.99
UBFD1O14562 AC078918.1-201ENST00000498515 228 ntBASIC2.65□□□□□ -1.99
UBFD1O14562 HMGB1P3-201ENST00000502802 616 ntBASIC2.65□□□□□ -1.99
UBFD1O14562 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC2.65□□□□□ -1.99
UBFD1O14562 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.65□□□□□ -1.99
UBFD1O14562 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.65□□□□□ -1.99
UBFD1O14562 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.65□□□□□ -1.99
UBFD1O14562 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.65□□□□□ -1.99
UBFD1O14562 AP002812.4-201ENST00000532139 286 ntBASIC2.65□□□□□ -1.99
UBFD1O14562 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms