Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 MFSD8-233ENST00000641482 4860 ntBASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 RNA5SP197-201ENST00000363357 119 ntBASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 RNU6-1066P-201ENST00000363573 105 ntBASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 SNORA38.1-201ENST00000364172 131 ntBASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 U3.15-201ENST00000365398 212 ntBASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 RNA5SP235-201ENST00000365411 114 ntBASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 U3.19-201ENST00000390893 196 ntBASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 Z80107.1-201ENST00000436830 412 ntBASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 NDUFA5P7-201ENST00000452914 242 ntBASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 BTF3P5-201ENST00000457252 467 ntBASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 RPL9P32-201ENST00000464118 620 ntBASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 RNU6-1231P-201ENST00000517185 103 ntBASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 OR5AP1P-201ENST00000529730 940 ntBASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 UBE2NP1-201ENST00000545592 458 ntBASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 AC093519.1-201ENST00000566109 298 ntBASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 AC099489.2-201ENST00000574976 260 ntBASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 MIR5047-201ENST00000579212 100 ntBASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 AC105429.2-201ENST00000610567 517 ntBASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 AC024257.5-201ENST00000612739 531 ntBASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 AL354976.1-201ENST00000613843 387 ntBASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 AC092628.2-201ENST00000622492 339 ntBASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 AL512506.2-201ENST00000624472 458 ntBASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 AP001002.2-201ENST00000625137 386 ntBASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 AC068620.4-201ENST00000636730 1182 ntBASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 CEP170P1-201ENST00000502249 4587 ntBASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NEDD8-MDP1E9PL57 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 RNU4-68P-201ENST00000364314 141 ntBASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 RNU6-283P-201ENST00000364788 107 ntBASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 RNU6-1226P-201ENST00000384317 107 ntBASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 RNU6-906P-201ENST00000384700 70 ntBASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 MIR649-201ENST00000384843 97 ntBASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 RPL17P50-201ENST00000396131 546 ntBASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 TMSB4XP8-201ENST00000402089 135 ntBASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 ERHP2-201ENST00000402323 299 ntBASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 RN7SKP111-201ENST00000410349 271 ntBASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 TMSB4XP6-201ENST00000415187 135 ntBASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 AC127526.1-201ENST00000417526 366 ntBASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 AC092634.6-201ENST00000418558 192 ntBASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 RPS12P23-201ENST00000419579 400 ntBASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 AC007435.1-201ENST00000421086 415 ntBASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 TMSB4XP1-201ENST00000424567 135 ntBASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 AC241584.1-201ENST00000438469 1241 ntBASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 RPS29P31-201ENST00000446147 164 ntBASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 MTCO3P16-201ENST00000454456 754 ntBASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 RPL23AP62-201ENST00000463396 453 ntBASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 MTCO3P35-201ENST00000485582 781 ntBASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 AC108729.1-201ENST00000487812 947 ntBASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 AP001086.1-201ENST00000494882 321 ntBASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 BOLA3P3-201ENST00000505182 232 ntBASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 AC114322.1-201ENST00000506771 926 ntBASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 MTCYBP37-201ENST00000510642 1133 ntBASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 AC093755.1-201ENST00000512950 1023 ntBASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 164.4 ms