Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 UBE2V1P11-201ENST00000411559 285 ntBASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 RPS3AP25-201ENST00000411660 793 ntBASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 AC245052.5-201ENST00000416320 649 ntBASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 AC106883.1-201ENST00000418805 562 ntBASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 OR1AA1P-201ENST00000419597 916 ntBASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 SDCBPP3-201ENST00000419629 891 ntBASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 RAC1P8-201ENST00000427086 527 ntBASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 AL353705.1-201ENST00000433468 480 ntBASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 GTF2IP3-201ENST00000433887 494 ntBASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 AC234064.1-201ENST00000436312 247 ntBASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 RPS7P5-201ENST00000441482 581 ntBASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 RPL6P5-201ENST00000445678 828 ntBASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 AL050341.1-201ENST00000447743 313 ntBASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 COX6CP18-201ENST00000448769 222 ntBASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 AC006499.5-201ENST00000505037 514 ntBASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 PRELID3BP4-201ENST00000515476 571 ntBASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 AC015688.2-201ENST00000584523 262 ntBASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 VN1R87P-201ENST00000596706 487 ntBASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 AC125494.3-201ENST00000602759 455 ntBASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 AP002906.1-201ENST00000603405 233 ntBASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 AC024060.1-201ENST00000607052 494 ntBASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 AC091046.2-201ENST00000620775 665 ntBASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
TRIM49D1C9J1S8 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
TRIM49D1C9J1S8 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 SNORA51.4-201ENST00000364993 124 ntBASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 OR1L1-202ENST00000373686 1083 ntBASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 RPL31P1-201ENST00000398116 372 ntBASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 RN7SKP58-201ENST00000411010 305 ntBASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 AC092745.2-202ENST00000411880 369 ntBASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 UBE2V1P9-201ENST00000414760 368 ntBASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 SSR1P2-201ENST00000415208 787 ntBASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 AC007390.1-201ENST00000415722 356 ntBASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 AL451062.2-201ENST00000427515 271 ntBASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 AL050321.1-201ENST00000432363 400 ntBASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 HMGN2P31-201ENST00000432430 273 ntBASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 AC023347.2-201ENST00000433994 462 ntBASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 NANOGP2-201ENST00000435391 727 ntBASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 ELOCP11-201ENST00000436690 332 ntBASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 AC092170.1-201ENST00000440211 356 ntBASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 ELOCP16-201ENST00000444494 332 ntBASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 DUXAP8-207ENST00000456786 622 ntBASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 AP004217.1-201ENST00000480579 346 ntBASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 RPS27P23-201ENST00000487608 251 ntBASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 RN7SL633P-201ENST00000488974 297 ntBASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 AC010285.3-201ENST00000511668 676 ntBASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 RNU6-1028P-201ENST00000517164 93 ntBASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 RN7SKP234-201ENST00000517173 224 ntBASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 NDUFS5P6-201ENST00000529136 295 ntBASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 AC023813.2-201ENST00000564321 469 ntBASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 MTND1P8-201ENST00000571424 950 ntBASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 MTND4LP24-201ENST00000572277 291 ntBASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 AC009237.15-201ENST00000610252 501 ntBASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 DUXAP10-204ENST00000612052 616 ntBASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 AC079395.3-201ENST00000615161 484 ntBASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 MIR8058-201ENST00000615737 89 ntBASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 XIST_intron.1-201ENST00000619444 68 ntBASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM49D1C9J1S8 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 AC016716.1-201ENST00000265882 708 ntBASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 DYNLT3P1-201ENST00000378574 347 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms