Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 Y_RNA.433-201ENST00000384089 102 ntBASIC1.92□□□□□ -2.1
COL6A5A8TX70 RNU6-342P-201ENST00000384521 104 ntBASIC1.92□□□□□ -2.1
COL6A5A8TX70 MIR137-201ENST00000385223 102 ntBASIC1.92□□□□□ -2.1
COL6A5A8TX70 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC1.92□□□□□ -2.1
COL6A5A8TX70 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.92□□□□□ -2.1
COL6A5A8TX70 RPS24P8-201ENST00000431490 402 ntBASIC1.92□□□□□ -2.1
COL6A5A8TX70 AC009263.1-201ENST00000441193 1239 ntBASIC1.92□□□□□ -2.1
COL6A5A8TX70 AC026436.1-201ENST00000510537 270 ntBASIC1.92□□□□□ -2.1
COL6A5A8TX70 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.92□□□□□ -2.1
COL6A5A8TX70 AC131238.1-201ENST00000617135 328 ntBASIC1.92□□□□□ -2.1
COL6A5A8TX70 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.92□□□□□ -2.1
COL6A5A8TX70 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
COL6A5A8TX70 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC1.91□□□□□ -2.1
COL6A5A8TX70 Z82209.1-201ENST00000422141 2135 ntBASIC1.91□□□□□ -2.1
COL6A5A8TX70 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
COL6A5A8TX70 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
COL6A5A8TX70 RPL23AP22-201ENST00000437556 453 ntBASIC1.91□□□□□ -2.1
COL6A5A8TX70 RPL31P41-201ENST00000477967 372 ntBASIC1.91□□□□□ -2.1
COL6A5A8TX70 NIPA2P2-201ENST00000496376 1083 ntBASIC1.91□□□□□ -2.1
COL6A5A8TX70 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.91□□□□□ -2.1
COL6A5A8TX70 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.91□□□□□ -2.1
COL6A5A8TX70 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC1.91□□□□□ -2.1
COL6A5A8TX70 AC141257.3-201ENST00000572906 215 ntBASIC1.91□□□□□ -2.1
COL6A5A8TX70 AL353684.1-201ENST00000622677 1120 ntBASIC1.91□□□□□ -2.1
COL6A5A8TX70 CR381653.2-201ENST00000624041 768 ntBASIC1.91□□□□□ -2.1
COL6A5A8TX70 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC1.91□□□□□ -2.1
COL6A5A8TX70 MTND5P12-201ENST00000502851 1449 ntBASIC1.91□□□□□ -2.1
COL6A5A8TX70 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC1.91□□□□□ -2.1
COL6A5A8TX70 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
COL6A5A8TX70 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
COL6A5A8TX70 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
COL6A5A8TX70 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
COL6A5A8TX70 RFX3-203ENST00000381984 364 ntTSL 3 BASIC1.91□□□□□ -2.1
COL6A5A8TX70 MIR583-201ENST00000384846 75 ntBASIC1.91□□□□□ -2.1
COL6A5A8TX70 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
COL6A5A8TX70 USP9YP20-201ENST00000419224 558 ntBASIC1.91□□□□□ -2.1
COL6A5A8TX70 ST13P14-201ENST00000474095 734 ntBASIC1.91□□□□□ -2.1
COL6A5A8TX70 ALDH7A1P3-201ENST00000492517 345 ntBASIC1.91□□□□□ -2.1
COL6A5A8TX70 IGLVIV-53-201ENST00000520107 367 ntBASIC1.91□□□□□ -2.1
COL6A5A8TX70 RPL21P5-201ENST00000554662 472 ntBASIC1.91□□□□□ -2.1
COL6A5A8TX70 Z73965.1-201ENST00000623412 2297 ntBASIC1.91□□□□□ -2.1
COL6A5A8TX70 AC093311.1-201ENST00000506586 2021 ntBASIC1.91□□□□□ -2.1
COL6A5A8TX70 AL512646.1-201ENST00000269395 1077 ntBASIC1.9□□□□□ -2.1
COL6A5A8TX70 MIR30E-201ENST00000362104 92 ntBASIC1.9□□□□□ -2.1
COL6A5A8TX70 NCSTNP1-201ENST00000406229 144 ntBASIC1.9□□□□□ -2.1
COL6A5A8TX70 SPA17P1-201ENST00000416656 452 ntBASIC1.9□□□□□ -2.1
COL6A5A8TX70 AC006960.1-201ENST00000419980 153 ntBASIC1.9□□□□□ -2.1
COL6A5A8TX70 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.9□□□□□ -2.1
COL6A5A8TX70 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC1.9□□□□□ -2.1
COL6A5A8TX70 RFESD-208ENST00000513950 464 ntTSL 5 BASIC1.9□□□□□ -2.1
COL6A5A8TX70 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC1.9□□□□□ -2.1
COL6A5A8TX70 AK6P1-201ENST00000540219 478 ntBASIC1.9□□□□□ -2.1
COL6A5A8TX70 AC010620.2-201ENST00000600135 313 ntBASIC1.9□□□□□ -2.1
COL6A5A8TX70 AC093536.2-201ENST00000565257 1406 ntBASIC1.9□□□□□ -2.1
COL6A5A8TX70 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC1.9□□□□□ -2.1
COL6A5A8TX70 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
COL6A5A8TX70 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
COL6A5A8TX70 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
COL6A5A8TX70 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
COL6A5A8TX70 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
COL6A5A8TX70 RNU1-89P-201ENST00000384592 164 ntBASIC1.9□□□□□ -2.11
COL6A5A8TX70 MIR1276-201ENST00000408707 83 ntBASIC1.9□□□□□ -2.11
COL6A5A8TX70 BTF3P4-201ENST00000418852 495 ntBASIC1.9□□□□□ -2.11
COL6A5A8TX70 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.9□□□□□ -2.11
COL6A5A8TX70 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC1.9□□□□□ -2.11
COL6A5A8TX70 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC1.9□□□□□ -2.11
COL6A5A8TX70 AC068657.1-201ENST00000520807 306 ntBASIC1.9□□□□□ -2.11
COL6A5A8TX70 AL356489.2-201ENST00000566968 3528 ntBASIC1.9□□□□□ -2.11
COL6A5A8TX70 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
COL6A5A8TX70 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
COL6A5A8TX70 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
COL6A5A8TX70 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
COL6A5A8TX70 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
COL6A5A8TX70 Z98941.1-201ENST00000407764 100 ntBASIC1.89□□□□□ -2.11
COL6A5A8TX70 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC1.89□□□□□ -2.11
COL6A5A8TX70 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC1.89□□□□□ -2.11
COL6A5A8TX70 AC128657.1-201ENST00000549459 145 ntBASIC1.89□□□□□ -2.11
COL6A5A8TX70 AL589994.2-201ENST00000621124 579 ntBASIC1.89□□□□□ -2.11
COL6A5A8TX70 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC1.89□□□□□ -2.11
COL6A5A8TX70 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC1.89□□□□□ -2.11
COL6A5A8TX70 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
COL6A5A8TX70 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
COL6A5A8TX70 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
COL6A5A8TX70 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC1.89□□□□□ -2.11
COL6A5A8TX70 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
COL6A5A8TX70 AL138878.1-201ENST00000405131 347 ntBASIC1.89□□□□□ -2.11
COL6A5A8TX70 RNA5SP274-201ENST00000410484 108 ntBASIC1.89□□□□□ -2.11
COL6A5A8TX70 AC002524.1-201ENST00000411687 547 ntBASIC1.89□□□□□ -2.11
COL6A5A8TX70 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC1.89□□□□□ -2.11
COL6A5A8TX70 AC098934.3-201ENST00000430450 190 ntBASIC1.89□□□□□ -2.11
COL6A5A8TX70 RPS26P40-201ENST00000435209 294 ntBASIC1.89□□□□□ -2.11
COL6A5A8TX70 UBE2V1P5-201ENST00000440070 405 ntBASIC1.89□□□□□ -2.11
COL6A5A8TX70 AL592437.1-201ENST00000443781 492 ntBASIC1.89□□□□□ -2.11
COL6A5A8TX70 AC104389.3-201ENST00000445629 235 ntBASIC1.89□□□□□ -2.11
COL6A5A8TX70 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.89□□□□□ -2.11
COL6A5A8TX70 CREM-226ENST00000469949 721 ntTSL 3 BASIC1.89□□□□□ -2.11
COL6A5A8TX70 AC105918.1-201ENST00000474399 838 ntBASIC1.89□□□□□ -2.11
COL6A5A8TX70 RPL23AP45-201ENST00000476406 468 ntBASIC1.89□□□□□ -2.11
COL6A5A8TX70 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.89□□□□□ -2.11
COL6A5A8TX70 TGIF1P1-201ENST00000558095 802 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms