Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 RNA5SP229-201ENST00000410809 99 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 RNU4-22P-201ENST00000411058 166 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 RNA5SP107-201ENST00000411358 122 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 RPS3AP25-201ENST00000411660 793 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 AL592310.1-201ENST00000414330 671 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 RPS29P4-201ENST00000414733 161 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 BX842559.1-201ENST00000419615 532 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 GTF2IP23-201ENST00000423746 351 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 RPL21P66-201ENST00000426566 466 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 AC006946.1-201ENST00000429106 328 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 HMGN2P31-201ENST00000432430 273 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 VDAC1P3-201ENST00000434069 851 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 HMGB1P12-201ENST00000438594 598 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 AC244505.3-201ENST00000454598 187 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 RPL7L1P8-201ENST00000469911 741 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 RPL7P38-201ENST00000488396 739 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 RPL23AP55-201ENST00000498163 452 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 RN7SKP265-201ENST00000516448 223 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 PAICSP4-201ENST00000517543 1253 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 AC026407.1-201ENST00000518369 204 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 AC006518.2-201ENST00000542513 940 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 AC015917.1-201ENST00000579654 510 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 MIR3690-201ENST00000580266 75 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 AL355812.1-201ENST00000603215 216 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 AP002906.1-201ENST00000603405 233 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 DPRXP5-201ENST00000604662 539 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 AC073387.2-201ENST00000604797 784 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 AC140725.3-201ENST00000616193 880 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 SNORD39.4-201ENST00000620099 78 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 AF117829.1-206ENST00000621883 3802 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 AL121594.5-201ENST00000631724 573 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 AC244258.1-201ENST00000637553 1071 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 MIR208A-201ENST00000362287 71 ntBASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 SNORD56.3-201ENST00000363507 71 ntBASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 SNORA70.4-201ENST00000365509 134 ntBASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 SKINT1L-201ENST00000401057 817 ntBASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 VN1R51P-201ENST00000411675 945 ntBASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 BTF3P8-201ENST00000414577 526 ntBASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 AC245052.5-201ENST00000416320 649 ntBASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 RPP40P1-201ENST00000426762 456 ntBASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 BX890604.2-201ENST00000427883 474 ntBASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 B3GNT2P1-201ENST00000434960 952 ntBASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 TXNP1-201ENST00000441872 371 ntBASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 ATP5C1P1-201ENST00000441945 895 ntBASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 AL034418.1-201ENST00000448675 860 ntBASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 CFTRP1-201ENST00000456646 183 ntBASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 AC010468.1-201ENST00000461022 817 ntBASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 RPL23AP14-201ENST00000468281 468 ntBASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 VN1R17P-201ENST00000472048 1090 ntBASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 AC078785.3-201ENST00000476607 425 ntBASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 RPL21P13-201ENST00000488305 481 ntBASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 AC093663.1-201ENST00000497190 394 ntBASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 USP9YP5-201ENST00000511770 630 ntBASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 AC112673.1-201ENST00000513168 575 ntBASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 RN7SKP244-201ENST00000516513 307 ntBASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 SNORA64.4-201ENST00000516632 81 ntBASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms