Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 GNL2P1-201ENST00000451274 2190 ntBASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 AC083843.3-201ENST00000623679 2186 ntBASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 RNA5SP172-201ENST00000365061 118 ntBASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 RNU6-898P-201ENST00000365627 104 ntBASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 MIR186-201ENST00000384988 86 ntBASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 U3.29-201ENST00000391296 212 ntBASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 HSPA8P15-201ENST00000401676 786 ntBASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 U3.35-201ENST00000408405 208 ntBASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 REREP1Y-201ENST00000422655 198 ntBASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 CYP4F32P-201ENST00000426492 504 ntBASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 CYCSP43-201ENST00000438233 310 ntBASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 REREP2Y-201ENST00000439103 200 ntBASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 AL034399.1-201ENST00000451535 380 ntBASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 RNU6-953P-201ENST00000459154 107 ntBASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 AC010326.1-201ENST00000462726 602 ntBASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 RPS10P20-201ENST00000494130 463 ntBASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 AC116917.1-201ENST00000520558 305 ntBASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 OR1F2P-201ENST00000570470 933 ntBASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 AC011476.5-201ENST00000615594 130 ntBASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 AL355480.1-201ENST00000629041 99 ntBASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 IGHVIII-44-202ENST00000636235 289 ntBASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 AC062022.1-201ENST00000451026 1684 ntBASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC6.74□□□□□ -1.33
PCDHGA4Q9Y5G9 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 AC024651.2-201ENST00000562480 2098 ntBASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 AC114947.2-201ENST00000565748 2125 ntBASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 AC020978.6-201ENST00000571197 3177 ntBASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 SNORD116-14-201ENST00000383894 92 ntBASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 SNORD116-17-201ENST00000383929 92 ntBASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 SNORD116-15-201ENST00000384445 92 ntBASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 SNORD116-20-201ENST00000384529 92 ntBASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 SNORD116-19-201ENST00000384729 92 ntBASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 SNORA40-201ENST00000388090 126 ntBASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 AL353133.1-201ENST00000407695 401 ntBASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 RN7SKP91-201ENST00000410852 288 ntBASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 TMSB10P2-201ENST00000416049 131 ntBASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 EEF1B2P3-201ENST00000447718 678 ntBASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 AP005660.1-201ENST00000522972 293 ntBASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 AC025588.3-201ENST00000604182 274 ntBASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 MIR8076-201ENST00000611401 83 ntBASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 MIR7109-201ENST00000613748 65 ntBASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 MIR6823-201ENST00000622118 61 ntBASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 PWAR1-201ENST00000624188 2414 ntBASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHGA4Q9Y5G9 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms